Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0011646

Physical Location & Seq

Genomic Coordinates Forward (+)

57503598 .. 57506445

Gene Structure 2848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG395300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGAAGTAGGTTCTCTTAACAGTGAGCAAGTACAGGACCCCGACTGCAATGAGATTGCAACTGACAGAGATGGTGTTTTGACAGAATTGGATGCTGAAAATCGTGTCCCAGAAGGAAAAAAGGAATTTGTTGCGCCTGCTATTGGAATGGAGTTTGAGTCATATGAGGATGCTTATAATTATTACAATTGCTATGCTAAGGAAGTGGGGTTTCGTGTTAGAGTGAAGAATTCATGGTTTAAGAGGAACAGTAAAGAGAAGTATGGTGCTGTTCTTTGTTGCAGCAGTCAAGGTTTCAAAAGAATTAAAGATGTGAACCGTTTGAGAAAGGAAACAAGAACTGGCTGTCCTGCAATGTTAAGGATGAGGTTAGTGGACTCCAAAAGGTGGAGGGTACTTGAAGTTGCGCTTGAACATAATCACTTATTAGGTACAAAGATCTACAAATCGATGAAAAAGATGGGAAGTGGAACAAAGAGGAAGTCACAGTCAAGTTCAGATGCAGAAAAGCGAACAATTAAGCTGTACCGAGCACTTGTGATAGATTCAGGGGGTAATGGACCCTCGAATTCGAATGCAACAGAAGCCAGGAATGATATTCCCAATCAGTTGAACCTCAAAAAAGGTGACACACAAGCAATTTATAATTACCTTTGTCGTATGCAGTTGACAAATCCGAATTTCTTTTACTTGATGGACATCAATGACGATGGGCGTTTGAGAAATGTGTTTTGGATTGATTCTAGGTCGAGGGCAGCATGCGGTTATTTTTGTGATGTGATATATATTGACAACACATACTTGGCAAATAAATTTGAGATCCCACTTGTGGCGTTAGTGGGGATAAATCACCATGGTCAAGCAGTGTTGCTTGGTTGTGCTTTGCTTGCTGGGGAGACGGCAGAGTCTTATATTTGGTTGTTCAAAGCTTGGCTTACATGTGTGTCAGGACATTCTCCGCAAACAATTATTACTGACAGGTGCAATGTTTTGCAGAGTGCAGTTGCTGAGGTGTTTCCTAGCTGCCATCATCGTTTTGGTTTGTCCCTGATCATTAAAAAAGTTCCAGAAAAGTTGGGTGGATCGCGCAATTATGATGCCATTAGGAAGACACTGCTTAAAGCAGTTTATGAAAGTCTGAAGGTGATTGAATTTGAAGCAGCATGGGGATTCATGATTCAGCATTTTGGAGTTAGTGATCATGAGTGGCTTCGATCTTTGTATGAGGACCGATTTAGGTGGGCTCCAGTTTACTTGAAAGAGACATCTTTTGCCGGAATGTCGGCTGCACATCCAGGTGAAACCTTGAGTCCATTTTTTGACAAATACGTACACAAGCAAACTCCACTGAAAGAATTTCTGGATAAGTATGAATTGGCTCTACAAAAGAAGCATAAGGAAGAAGCTCTTGCAGATATTGAGTCGAGAAGCTCAAGTCCCATGTTGAAAACCAGATGTTCTTTTGAGTTGCAGCTTTCAAAAGTTTACACTAAAGAGATATTCAAAAAATTCCAATTTGAAGTGGAGGAGATGTATTCTTGTTTTAGCACTACACAGTTGCACATTGATGGGCCAATTGTAATATTCTTGGTCAAGGAGCGTGTCGTGGCAGATGGGAATCGGCGAGAGATAAGAGATTATGAGGTTCTGTACAACAGAACAGCAGGTGAGGTTCGGTGTATCTGCAGTTGCTTTAACTTCCATGGGTATCTATGCCGGCATGCTTTGTGTGTCCTTAATTTTAATGGAGTGGAGGAGATCCCTTCCAAGTACATTCTGTCACGATGGAAAAAGGATTACAAGCGTTTATATATTCCAGATCATGGCTCCAATAATGTCGATGTTACCGACCGTATGCAGTGGTTCAGTCAGCTGTATAGAAGTGCCTTGCAAATTGTAGAGGAAGGTGTGATCTCTCTTGACCATTACAATGTAGCATTGCAAGCATTTGAAGAGTCTTTGAAAAGGGTTCACGAGATAGAAGACAAGCATGAGCCTGAAAACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

669

Amino Acids

77.13

Weight (kDa)

8.24

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	60 - 143	7.9e-23	FAR1 DNA-binding domain
MULE	PF10551	260 - 354	1e-28	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011646)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52520
fragaria_vesca	FvH4_6g29431 FvH4_6g29431 FvH4_6g29431
malus_domestica	MD17G1214500.v1.1
prunus_persica	Prupe.3G090400_v2.0.a1 Prupe.3G090400_v2.0.a1
pyrus_communis	pycom17g21910
rosa_chinensis	RchiOBHm_Chr2g0134901
rosa_laevigata	RLG00000019428
rosa_multiflora	Rmu_sc0007475.1_g000011 Rmu_ssc0000401.1_g000001
rosa_roxburghii	Rroxscaffold_2G00109670
rosa_rugosa	Rorug02G0321100
rosa_samantha	Rh2AG372800 Rh2BG378600 Rh2CG357300 Rh2DG395300
rosa_wichuraiana	Rw2G030380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	177, 645
AarI	CACCTGC	1 cut(s)	1655
AasI	GACNNNNNNGTC	1 cut(s)	904
Acc36I	ACCTGC	1 cut(s)	1655
AccB7I	CCANNNNNTGG	2 cut(s)	387, 1823
AccII	CGCG	1 cut(s)	1087
AciI	CCGC	2 cut(s)	762, 959
AclWI	GGATC	3 cut(s)	814, 1090, 1753
AcsI	RAATTY	8 cut(s)	125, 229, 568, 679, 812, 1151, 1355, 1508
AcuI	CTGAAG	1 cut(s)	1160
AfaI	GTAC	7 cut(s)	33, 396, 433, 527, 1332, 1652, 1772
AfiI	CCNNNNNNNGG	4 cut(s)	143, 387, 829, 1823
AflIII	ACRYGT	1 cut(s)	938
AjnI	CCWGG	2 cut(s)	587, 1294
AjuI	GAANNNNNNNTTGG	2 cut(s)	715, 747
AloI	GAACNNNNNNTCC	2 cut(s)	331, 363
AluBI	AGCT	7 cut(s)	523, 929, 1023, 1406, 1431, 1474, 1873
AluI	AGCT	7 cut(s)	523, 929, 1023, 1406, 1431, 1474, 1873
Alw21I	GWGCWC	1 cut(s)	535
Alw26I	GTCTC	2 cut(s)	890, 1256
AlwI	GGATC	3 cut(s)	814, 1090, 1753
AlwNI	CAGNNNCTG	1 cut(s)	1007
AoxI	GGCC	1 cut(s)	1571
ApeKI	GCWGC	6 cut(s)	282, 755, 1023, 1160, 1286, 1471
ApoI	RAATTY	8 cut(s)	125, 229, 568, 679, 812, 1151, 1355, 1508
ArsI	GACNNNNNNTTYG	2 cut(s)	467, 499
AspLEI	GCGC	3 cut(s)	136, 409, 1089
AspS9I	GGNCC	4 cut(s)	37, 560, 1228, 1571
AsuHPI	GGTGA	5 cut(s)	638, 842, 1156, 1310, 1679
AsuII	TTCGAA	1 cut(s)	572
AvaII	GGWCC	3 cut(s)	37, 560, 1228
BanII	GRGCYC	1 cut(s)	1246
BauI	CACGAG	1 cut(s)	1973
BbsI	GAAGAC	2 cut(s)	1115, 1989
Bbv12I	GWGCWC	1 cut(s)	535
BbvCI	CCTCAGC	1 cut(s)	1008
BbvI	GCAGC	6 cut(s)	294, 767, 1010, 1172, 1273, 1483
BccI	CCATC	8 cut(s)	65, 454, 688, 704, 1035, 1562, 1607, 1779
BceAI	ACGGC	1 cut(s)	915
BciT130I	CCWGG	2 cut(s)	589, 1296
BclI	TGATCA	2 cut(s)	1050, 1198
BcoDI	GTCTC	2 cut(s)	890, 1256
BfaI	CTAG	2 cut(s)	744, 1020
BfmI	CTRYAG	1 cut(s)	1684
BfuAI	ACCTGC	1 cut(s)	1655
BglII	AGATCT	1 cut(s)	438
BisI	GCNGC	6 cut(s)	283, 756, 1024, 1161, 1287, 1472
BlsI	GCNGC	6 cut(s)	284, 757, 1025, 1162, 1288, 1473
Bme1390I	CCNGG	2 cut(s)	589, 1296
Bme18I	GGWCC	3 cut(s)	37, 560, 1228
BmgT120I	GGNCC	4 cut(s)	37, 560, 1228, 1571
BmiI	GGNNCC	4 cut(s)	39, 562, 1245, 1828
BmrFI	CCNGG	2 cut(s)	589, 1296
BmsI	GCATC	4 cut(s)	82, 160, 490, 1087
BpiI	GAAGAC	2 cut(s)	1115, 1989
BpmI	CTGGAG	1 cut(s)	1230
Bpu10I	CCTNAGC	2 cut(s)	198, 1008
Bpu14I	TTCGAA	1 cut(s)	572
BpuEI	CTTGAG	2 cut(s)	1327, 1417
Bsa29I	ATCGAT	1 cut(s)	449
BsaAI	YACGTR	1 cut(s)	1330
BsaBI	GATNNNNATC	2 cut(s)	698, 1617
BsaJI	CCNNGG	2 cut(s)	853, 1702
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 1517, 1547
Bsc4I	CCNNNNNNNGG	4 cut(s)	143, 387, 829, 1823
Bse118I	RCCGGY	1 cut(s)	1716
Bse1I	ACTGG	2 cut(s)	346, 1247
Bse3DI	GCAATG	4 cut(s)	55, 360, 991, 1937
Bse8I	GATNNNNATC	2 cut(s)	698, 1617
BseBI	CCWGG	2 cut(s)	589, 1296
BseCI	ATCGAT	1 cut(s)	449
BseDI	CCNNGG	2 cut(s)	853, 1702
BseGI	GGATG	4 cut(s)	97, 175, 369, 1291
BseJI	GATNNNNATC	2 cut(s)	698, 1617
BseLI	CCNNNNNNNGG	4 cut(s)	143, 387, 829, 1823
BseMI	GCAATG	4 cut(s)	55, 360, 991, 1937
BseMII	CTCAG	1 cut(s)	999
BseNI	ACTGG	2 cut(s)	346, 1247
BseRI	GAGGAG	2 cut(s)	1541, 1769
BseXI	GCAGC	6 cut(s)	294, 767, 1010, 1172, 1273, 1483
BseYI	CCCAGC	1 cut(s)	890
BsgI	GTGCAG	2 cut(s)	1020, 1272
Bsh1236I	CGCG	1 cut(s)	1087
Bsh1285I	CGRYCG	1 cut(s)	1852
BshFI	GGCC	1 cut(s)	1573
BshVI	ATCGAT	1 cut(s)	449
BsiEI	CGRYCG	1 cut(s)	1852
BsiHKAI	GWGCWC	1 cut(s)	535
BsiSI	CCGG	2 cut(s)	1275, 1717
BslFI	GGGAC	3 cut(s)	92, 1030, 1422
BslI	CCNNNNNNNGG	4 cut(s)	143, 387, 829, 1823
BsmAI	GTCTC	2 cut(s)	890, 1256
BsmBI	CGTCTC	1 cut(s)	890
BsmFI	GGGAC	3 cut(s)	92, 1030, 1422
BsmI	GAATGC	1 cut(s)	580
BsnI	GGCC	1 cut(s)	1573
Bsp119I	TTCGAA	1 cut(s)	572
Bsp1286I	GDGCHC	2 cut(s)	535, 1246
Bsp1407I	TGTACA	1 cut(s)	1650
Bsp143I	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
Bsp19I	CCATGG	2 cut(s)	853, 1702
BspACI	CCGC	2 cut(s)	762, 959
BspANI	GGCC	1 cut(s)	1573
BspCNI	CTCAG	1 cut(s)	1000
BspDI	ATCGAT	1 cut(s)	449
BspFNI	CGCG	1 cut(s)	1087
BspHI	TCATGA	2 cut(s)	1173, 1201
BspLI	GGNNCC	4 cut(s)	39, 562, 1245, 1828
BspMAI	CTGCAG	1 cut(s)	1688
BspMI	ACCTGC	1 cut(s)	1655
BspPI	GGATC	3 cut(s)	814, 1090, 1753
BspT104I	TTCGAA	1 cut(s)	572
BsrDI	GCAATG	4 cut(s)	55, 360, 991, 1937
BsrFI	RCCGGY	1 cut(s)	1716
BsrGI	TGTACA	1 cut(s)	1650
BsrI	ACTGG	2 cut(s)	346, 1247
BssAI	RCCGGY	1 cut(s)	1716
BssECI	CCNNGG	2 cut(s)	853, 1702
BssMI	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
BssSI	CACGAG	1 cut(s)	1973
BssT1I	CCWWGG	2 cut(s)	853, 1702
Bst2BI	CACGAG	1 cut(s)	1973
Bst2UI	CCWGG	2 cut(s)	589, 1296
Bst4CI	ACNGT	6 cut(s)	23, 251, 320, 489, 1557, 1853
Bst6I	CTCTTC	1 cut(s)	1947
BstAUI	TGTACA	1 cut(s)	1650
BstBAI	YACGTR	1 cut(s)	1330
BstBI	TTCGAA	1 cut(s)	572
BstC8I	GCNNGC	6 cut(s)	138, 760, 888, 1718, 1722, 1944
BstDEI	CTNAG	2 cut(s)	198, 1008
BstDSI	CCRYGG	2 cut(s)	853, 1702
BstF5I	GGATG	4 cut(s)	97, 175, 369, 1291
BstFNI	CGCG	1 cut(s)	1087
BstHHI	GCGC	3 cut(s)	136, 409, 1089
BstKTI	GATC	9 cut(s)	441, 822, 1053, 1085, 1201, 1217, 1761, 1822, 1914
BstMAI	GTCTC	2 cut(s)	890, 1256
BstMBI	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
BstMCI	CGRYCG	1 cut(s)	1852
BstMWI	GCNNNNNNNGC	3 cut(s)	584, 887, 1943
BstNI	CCWGG	2 cut(s)	589, 1296
BstNSI	RCATGY	3 cut(s)	762, 942, 1724
BstSCI	CCNGG	2 cut(s)	587, 1294
BstSFI	CTRYAG	1 cut(s)	1684
BstSNI	TACGTA	1 cut(s)	1330
BstUI	CGCG	1 cut(s)	1087
BstV1I	GCAGC	6 cut(s)	294, 767, 1010, 1172, 1273, 1483
BstV2I	GAAGAC	2 cut(s)	1115, 1989
BstX2I	RGATCY	3 cut(s)	438, 819, 1758
BstYI	RGATCY	3 cut(s)	438, 819, 1758
Bsu15I	ATCGAT	1 cut(s)	449
BsuRI	GGCC	1 cut(s)	1573
BsuTUI	ATCGAT	1 cut(s)	449
BtgI	CCRYGG	2 cut(s)	853, 1702
BtsCI	GGATG	4 cut(s)	97, 175, 369, 1291
BtsI	GCAGTG	3 cut(s)	870, 1112, 1865
BtsIMutI	CAGTG	5 cut(s)	28, 870, 1112, 1346, 1865
BveI	ACCTGC	1 cut(s)	1655
Cac8I	GCNNGC	6 cut(s)	138, 760, 888, 1718, 1722, 1944
CaiI	CAGNNNCTG	1 cut(s)	1007
CciI	TCATGA	2 cut(s)	1173, 1201
CfoI	GCGC	3 cut(s)	136, 409, 1089
Cfr10I	RCCGGY	1 cut(s)	1716
Cfr13I	GGNCC	4 cut(s)	37, 560, 1228, 1571
ClaI	ATCGAT	1 cut(s)	449
Csp6I	GTAC	7 cut(s)	32, 395, 432, 526, 1331, 1651, 1771
CviQI	GTAC	7 cut(s)	32, 395, 432, 526, 1331, 1651, 1771
DdeI	CTNAG	2 cut(s)	198, 1008
DpnI	GATC	9 cut(s)	440, 821, 1052, 1084, 1200, 1216, 1760, 1821, 1913
DpnII	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
DrdI	GACNNNNNNGTC	1 cut(s)	904
DseDI	GACNNNNNNGTC	1 cut(s)	904
Eam1104I	CTCTTC	1 cut(s)	1947
EarI	CTCTTC	1 cut(s)	1947
Eco105I	TACGTA	1 cut(s)	1330
Eco130I	CCWWGG	2 cut(s)	853, 1702
Eco24I	GRGCYC	1 cut(s)	1246
Eco47I	GGWCC	3 cut(s)	37, 560, 1228
Eco57I	CTGAAG	1 cut(s)	1160
EcoO109I	RGGNCCY	1 cut(s)	37
EcoRI	GAATTC	2 cut(s)	229, 568
EcoRII	CCWGG	2 cut(s)	587, 1294
EcoT14I	CCWWGG	2 cut(s)	853, 1702
EcoT38I	GRGCYC	1 cut(s)	1246
ErhI	CCWWGG	2 cut(s)	853, 1702
Esp3I	CGTCTC	1 cut(s)	890
FalI	AAGNNNNNCTT	6 cut(s)	393, 425, 918, 950, 1392, 1424
FaqI	GGGAC	3 cut(s)	92, 1030, 1422
FauNDI	CATATG	1 cut(s)	163
FbaI	TGATCA	2 cut(s)	1050, 1198
Fnu4HI	GCNGC	6 cut(s)	283, 756, 1024, 1161, 1287, 1472
FokI	GGATG	4 cut(s)	104, 182, 376, 1278
FriOI	GRGCYC	1 cut(s)	1246
Fsp4HI	GCNGC	6 cut(s)	283, 756, 1024, 1161, 1287, 1472
FspBI	CTAG	2 cut(s)	744, 1020
GlaI	GCGC	3 cut(s)	135, 408, 1088
GluI	GCNGC	6 cut(s)	283, 756, 1024, 1161, 1287, 1472
GsaI	CCCAGC	1 cut(s)	894
GsuI	CTGGAG	1 cut(s)	1230
HaeIII	GGCC	1 cut(s)	1573
HapII	CCGG	2 cut(s)	1275, 1717
HhaI	GCGC	3 cut(s)	136, 409, 1089
Hin6I	GCGC	3 cut(s)	134, 407, 1087
HinP1I	GCGC	3 cut(s)	134, 407, 1087
HincII	GTYRAC	1 cut(s)	669
HindII	GTYRAC	1 cut(s)	669
HindIII	AAGCTT	1 cut(s)	927
HpaII	CCGG	2 cut(s)	1275, 1717
HphI	GGTGA	5 cut(s)	638, 842, 1156, 1310, 1679
Hpy166II	GTNNAC	7 cut(s)	316, 376, 669, 1252, 1333, 1486, 1972
Hpy188I	TCNGA	3 cut(s)	499, 678, 1140
Hpy8I	GTNNAC	7 cut(s)	316, 376, 669, 1252, 1333, 1486, 1972
HpyAV	CCTTC	4 cut(s)	107, 1135, 1773, 1898
HpyCH4III	ACNGT	6 cut(s)	23, 251, 320, 489, 1557, 1853
HpyCH4IV	ACGT	1 cut(s)	1329
HpyF10VI	GCNNNNNNNGC	3 cut(s)	584, 887, 1943
HpyF3I	CTNAG	2 cut(s)	198, 1008
HpySE526I	ACGT	1 cut(s)	1329
HspAI	GCGC	3 cut(s)	134, 407, 1087
KroI	GCCGGC	1 cut(s)	1716
KroNI	GCCGGC	1 cut(s)	1718
Ksp22I	TGATCA	2 cut(s)	1050, 1198
Kzo9I	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
LmnI	GCTCC	3 cut(s)	1249, 1597, 1832
Lsp1109I	GCAGC	6 cut(s)	294, 767, 1010, 1172, 1273, 1483
LweI	GCATC	4 cut(s)	82, 160, 490, 1087
MaeI	CTAG	2 cut(s)	744, 1020
MaeII	ACGT	1 cut(s)	1329
MaeIII	GTNAC	4 cut(s)	483, 626, 1779, 1843
MalI	GATC	9 cut(s)	440, 821, 1052, 1084, 1200, 1216, 1760, 1821, 1913
MboI	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
MboII	GAAGA	5 cut(s)	238, 1120, 1412, 1964, 1994
MfeI	CAATTG	2 cut(s)	187, 1575
MflI	RGATCY	3 cut(s)	438, 819, 1758
MhlI	GDGCHC	2 cut(s)	535, 1246
MlyI	GAGTC	6 cut(s)	167, 371, 914, 1318, 1430, 1964
MroNI	GCCGGC	1 cut(s)	1716
MslI	CAYNNNNRTG	3 cut(s)	1296, 1566, 1929
MspA1I	CMGCKG	1 cut(s)	1873
MspI	CCGG	2 cut(s)	1275, 1717
MspR9I	CCNGG	2 cut(s)	589, 1296
MunI	CAATTG	2 cut(s)	187, 1575
Mva1269I	GAATGC	1 cut(s)	580
MvaI	CCWGG	2 cut(s)	589, 1296
MvnI	CGCG	1 cut(s)	1087
MwoI	GCNNNNNNNGC	3 cut(s)	584, 887, 1943
NaeI	GCCGGC	1 cut(s)	1718
NcoI	CCATGG	2 cut(s)	853, 1702
NdeI	CATATG	1 cut(s)	163
NdeII	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
NgoMIV	GCCGGC	1 cut(s)	1716
NlaIV	GGNNCC	4 cut(s)	39, 562, 1245, 1828
NmuCI	GTSAC	3 cut(s)	483, 626, 1779
NspI	RCATGY	3 cut(s)	762, 942, 1724
NspV	TTCGAA	1 cut(s)	572
PaeI	GCATGC	2 cut(s)	762, 1724
PagI	TCATGA	2 cut(s)	1173, 1201
PaqCI	CACCTGC	1 cut(s)	1655
PciI	ACATGT	1 cut(s)	938
PcsI	WCGNNNNNNNCGW	1 cut(s)	1845
PctI	GAATGC	1 cut(s)	580
PdiI	GCCGGC	1 cut(s)	1718
PfeI	GAWTC	5 cut(s)	545, 740, 1170, 1177, 1618
PflMI	CCANNNNNTGG	2 cut(s)	387, 1823
PkrI	GCNGC	6 cut(s)	284, 757, 1025, 1162, 1288, 1473
PleI	GAGTC	6 cut(s)	166, 371, 913, 1317, 1429, 1963
PpsI	GAGTC	6 cut(s)	166, 371, 913, 1317, 1429, 1963
Ppu21I	YACGTR	1 cut(s)	1330
PpuMI	RGGWCCY	1 cut(s)	37
PscI	ACATGT	1 cut(s)	938
PsiI	TTATAA	2 cut(s)	177, 645
Psp5II	RGGWCCY	1 cut(s)	37
Psp6I	CCWGG	2 cut(s)	587, 1294
PspFI	CCCAGC	1 cut(s)	890
PspGI	CCWGG	2 cut(s)	587, 1294
PspN4I	GGNNCC	4 cut(s)	39, 562, 1245, 1828
PspPI	GGNCC	4 cut(s)	37, 560, 1228, 1571
PspPPI	RGGWCCY	1 cut(s)	37
PstI	CTGCAG	1 cut(s)	1688
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	3 cut(s)	438, 819, 1758
PvuII	CAGCTG	1 cut(s)	1873
RsaI	GTAC	7 cut(s)	33, 396, 433, 527, 1332, 1652, 1772
RsaNI	GTAC	7 cut(s)	32, 395, 432, 526, 1331, 1651, 1771
RseI	CAYNNNNRTG	3 cut(s)	1296, 1566, 1929
SatI	GCNGC	6 cut(s)	283, 756, 1024, 1161, 1287, 1472
Sau3AI	GATC	9 cut(s)	438, 819, 1050, 1082, 1198, 1214, 1758, 1819, 1911
Sau96I	GGNCC	4 cut(s)	37, 560, 1228, 1571
SchI	GAGTC	6 cut(s)	167, 371, 914, 1318, 1430, 1964
ScrFI	CCNGG	2 cut(s)	589, 1296
SduI	GDGCHC	2 cut(s)	535, 1246
SfaNI	GCATC	4 cut(s)	82, 160, 490, 1087
SfcI	CTRYAG	1 cut(s)	1684
SfuI	TTCGAA	1 cut(s)	572
SinI	GGWCC	3 cut(s)	37, 560, 1228
SmiMI	CAYNNNNRTG	3 cut(s)	1296, 1566, 1929
SmlI	CTYRAG	2 cut(s)	1306, 1432
SmoI	CTYRAG	2 cut(s)	1306, 1432
SnaBI	TACGTA	1 cut(s)	1330
SphI	GCATGC	2 cut(s)	762, 1724
SsiI	CCGC	2 cut(s)	762, 959
SspI	AATATT	1 cut(s)	1584
SspMI	CTAG	2 cut(s)	744, 1020
StyD4I	CCNGG	2 cut(s)	587, 1294
StyI	CCWWGG	2 cut(s)	853, 1702
TaaI	ACNGT	6 cut(s)	23, 251, 320, 489, 1557, 1853
TaiI	ACGT	1 cut(s)	1332
TaqI	TCGA	7 cut(s)	449, 566, 572, 749, 1213, 1424, 1839
TaqII	GACCGA	1 cut(s)	1245
TatI	WGTACW	3 cut(s)	31, 1650, 1770
TfiI	GAWTC	5 cut(s)	545, 740, 1170, 1177, 1618
TscAI	CASTG	5 cut(s)	28, 870, 1119, 1353, 1865
TseFI	GTSAC	3 cut(s)	483, 626, 1779
TseI	GCWGC	6 cut(s)	282, 755, 1023, 1160, 1286, 1471
Tsp45I	GTSAC	3 cut(s)	483, 626, 1779
TspDTI	ATGAA	5 cut(s)	222, 467, 1146, 1162, 1386
TspRI	CASTG	5 cut(s)	28, 870, 1119, 1353, 1865
Van91I	CCANNNNNTGG	2 cut(s)	387, 1823
VpaK11BI	GGWCC	3 cut(s)	37, 560, 1228
XapI	RAATTY	8 cut(s)	125, 229, 568, 679, 812, 1151, 1355, 1508
XceI	RCATGY	3 cut(s)	762, 942, 1724
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1034
XspI	CTAG	2 cut(s)	744, 1020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.