Prupe.1G014900_v2.0.a1

Lactoylglutathione lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012372
Physical Location & Seq
Reverse (-)
1085656 .. 1087943
2288 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G014900.2

Sequence Viewer

Length: 480 bp
ATGAATAGAATAGAAGCTACAGCCCCAAACAGACTACCAAATAGGCGATTAGAAGAAATGGCGGCAGCAGTAGCAGAAGGAGTGAGTCTCAACCATATTTCCAGGGAATCCTCCGATATCAGGCGCCTCGCCAATTTCTACAAAGAGATATTTGGGTTTGAGGAGATAGAGAGCCCAAACTTGGAATTCAAGGTGATATGGCTCAAGGGCCCTGGAGCTTTTGCCTTCCACCTCATCGAGAGGAACCCAGATTACAACCTTCCAGAAGGACCCTGGAGCGCCACGTCACCTGTAGCTGACCCAAGCCATCTCCCCAGAGGCCACCATGTCTGCTTCTCCGTCTCTAATTTCCACTCCTTTGTCCAAACCCTCAAGGACAAGGGAATTCAGACATTTGAGAAGTCCTTACCTGATGGTAAGGTCAAGCAAGTCTTTTTCTTTGATCCCGATGGCAATGGATTGGAGGTTGCAGGTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyoxalase Glyoxalase_4

Protein Analysis

160

Amino Acids

17.87

Weight (kDa)

5.86

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012372)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32090 AT2G32090
fragaria_vesca FvH4_4g16340 FvH4_4g16340
malus_domestica MD13G1194100.v1.1
prunus_persica Prupe.1G014900_v2.0.a1 Prupe.1G014900_v2.0.a1
pyrus_communis pycom13g16640
rosa_chinensis RchiOBHm_Chr4g0416051
rosa_laevigata RLG00000008022
rosa_multiflora Rmu_sc0007573.1_g000005 Rmu_sc0007573.1_g000007
rosa_roxburghii Rroxscaffold_5G00359880
rosa_rugosa Rorug04G0137700
rosa_samantha Rh4AG200000 Rh4BG197600 Rh4CG211300 Rh4DG197800
rosa_wichuraiana Rw4G016980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 461
AccB1I GGYRCC 1 cut(s) 123
AciI CCGC 1 cut(s) 62
AclWI GGATC 1 cut(s) 437
AcsI RAATTY 2 cut(s) 185, 384
AcyI GRCGYC 1 cut(s) 124
AfiI CCNNNNNNNGG 2 cut(s) 120, 181
AgsI TTSAA 1 cut(s) 190
AjiI CACGTC 1 cut(s) 285
AjnI CCWGG 3 cut(s) 101, 211, 272
AluBI AGCT 3 cut(s) 17, 218, 296
AluI AGCT 3 cut(s) 17, 218, 296
Alw26I GTCTC 2 cut(s) 92, 346
AlwI GGATC 1 cut(s) 437
AoxI GGCC 2 cut(s) 208, 319
ApaI GGGCCC 1 cut(s) 212
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 2 cut(s) 185, 384
AspLEI GCGC 2 cut(s) 126, 281
AspS9I GGNCC 3 cut(s) 208, 209, 269
AsuHPI GGTGA 2 cut(s) 205, 279
AvaII GGWCC 1 cut(s) 269
BaeGI GKGCMC 1 cut(s) 212
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 2 cut(s) 176, 212
BbvI GCAGC 1 cut(s) 77
BccI CCATC 3 cut(s) 315, 407, 443
BciT130I CCWGG 3 cut(s) 103, 213, 274
BcoDI GTCTC 2 cut(s) 92, 346
BfmI CTRYAG 2 cut(s) 18, 291
BfoI RGCGCY 2 cut(s) 127, 282
BfuAI ACCTGC 1 cut(s) 461
BisI GCNGC 2 cut(s) 63, 66
BlsI GCNGC 2 cut(s) 64, 67
Bme1390I CCNGG 3 cut(s) 103, 213, 274
Bme18I GGWCC 1 cut(s) 269
BmgBI CACGTC 1 cut(s) 285
BmgT120I GGNCC 3 cut(s) 208, 209, 269
BmiI GGNNCC 4 cut(s) 125, 210, 245, 271
BmrFI CCNGG 3 cut(s) 103, 213, 274
BplI GAGNNNNNCTC 2 cut(s) 72, 104
BpmI CTGGAG 2 cut(s) 234, 295
BpuEI CTTGAG 2 cut(s) 188, 356
BsaHI GRCGYC 1 cut(s) 124
BsaJI CCNNGG 3 cut(s) 102, 211, 272
Bsc4I CCNNNNNNNGG 2 cut(s) 120, 181
Bse3DI GCAATG 1 cut(s) 460
BseBI CCWGG 3 cut(s) 103, 213, 274
BseDI CCNNGG 3 cut(s) 102, 211, 272
BseLI CCNNNNNNNGG 2 cut(s) 120, 181
BseMI GCAATG 1 cut(s) 460
BseRI GAGGAG 1 cut(s) 176
BseSI GKGCMC 1 cut(s) 212
BseXI GCAGC 1 cut(s) 77
BshFI GGCC 2 cut(s) 210, 321
BshNI GGYRCC 1 cut(s) 123
BslI CCNNNNNNNGG 2 cut(s) 120, 181
BsmAI GTCTC 2 cut(s) 92, 346
BsmBI CGTCTC 1 cut(s) 346
BsnI GGCC 2 cut(s) 210, 321
Bsp120I GGGCCC 1 cut(s) 208
Bsp1286I GDGCHC 2 cut(s) 176, 212
Bsp143I GATC 1 cut(s) 442
BspACI CCGC 1 cut(s) 62
BspANI GGCC 2 cut(s) 210, 321
BspLI GGNNCC 4 cut(s) 125, 210, 245, 271
BspMI ACCTGC 1 cut(s) 461
BspPI GGATC 1 cut(s) 437
BspT107I GGYRCC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 460
BssECI CCNNGG 3 cut(s) 102, 211, 272
BssMI GATC 1 cut(s) 442
BssNI GRCGYC 1 cut(s) 124
Bst2UI CCWGG 3 cut(s) 103, 213, 274
BstACI GRCGYC 1 cut(s) 124
BstH2I RGCGCY 2 cut(s) 127, 282
BstHHI GCGC 2 cut(s) 126, 281
BstKTI GATC 1 cut(s) 445
BstMAI GTCTC 2 cut(s) 92, 346
BstMBI GATC 1 cut(s) 442
BstMWI GCNNNNNNNGC 1 cut(s) 71
BstNI CCWGG 3 cut(s) 103, 213, 274
BstSCI CCNGG 3 cut(s) 101, 211, 272
BstSFI CTRYAG 2 cut(s) 18, 291
BstSLI GKGCMC 1 cut(s) 212
BstV1I GCAGC 1 cut(s) 77
BsuRI GGCC 2 cut(s) 210, 321
BtrI CACGTC 1 cut(s) 285
BveI ACCTGC 1 cut(s) 461
CfoI GCGC 2 cut(s) 126, 281
Cfr13I GGNCC 3 cut(s) 208, 209, 269
CviAII CATG 1 cut(s) 326
CviJI RGCY 9 cut(s) 17, 23, 174, 202, 210, 218, 296, 306, 321
CviKI_1 RGCY 9 cut(s) 17, 23, 174, 202, 210, 218, 296, 306, 321
DinI GGCGCC 1 cut(s) 125
DpnI GATC 1 cut(s) 444
DpnII GATC 1 cut(s) 442
Eco24I GRGCYC 2 cut(s) 176, 212
Eco32I GATATC 1 cut(s) 118
Eco47I GGWCC 1 cut(s) 269
EcoO109I RGGNCCY 3 cut(s) 208, 209, 269
EcoRI GAATTC 2 cut(s) 185, 384
EcoRII CCWGG 3 cut(s) 101, 211, 272
EcoRV GATATC 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 176, 212
EgeI GGCGCC 1 cut(s) 125
EheI GGCGCC 1 cut(s) 125
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 1 cut(s) 329
FaiI YATR 3 cut(s) 96, 199, 327
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FatI CATG 1 cut(s) 325
Fnu4HI GCNGC 2 cut(s) 63, 66
FriOI GRGCYC 2 cut(s) 176, 212
Fsp4HI GCNGC 2 cut(s) 63, 66
GlaI GCGC 2 cut(s) 125, 280
GluI GCNGC 2 cut(s) 63, 66
GsuI CTGGAG 2 cut(s) 234, 295
HaeII RGCGCY 2 cut(s) 127, 282
HaeIII GGCC 2 cut(s) 210, 321
HhaI GCGC 2 cut(s) 126, 281
Hin1I GRCGYC 1 cut(s) 124
Hin1II CATG 1 cut(s) 329
Hin6I GCGC 2 cut(s) 124, 279
HinP1I GCGC 2 cut(s) 124, 279
HinfI GANTC 2 cut(s) 85, 107
HphI GGTGA 2 cut(s) 205, 279
Hpy188I TCNGA 2 cut(s) 115, 390
Hpy188III TCNNGA 3 cut(s) 238, 263, 446
HpyAV CCTTC 4 cut(s) 71, 235, 260, 269
HpyCH4IV ACGT 1 cut(s) 284
HpyCH4V TGCA 1 cut(s) 470
HpyF10VI GCNNNNNNNGC 1 cut(s) 71
HpySE526I ACGT 1 cut(s) 284
Hsp92I GRCGYC 1 cut(s) 124
Hsp92II CATG 1 cut(s) 329
HspAI GCGC 2 cut(s) 124, 279
KasI GGCGCC 1 cut(s) 123
Kzo9I GATC 1 cut(s) 442
LmnI GCTCC 2 cut(s) 215, 276
Lsp1109I GCAGC 1 cut(s) 77
MaeII ACGT 1 cut(s) 284
MaeIII GTNAC 1 cut(s) 285
MalI GATC 1 cut(s) 444
MboI GATC 1 cut(s) 442
MboII GAAGA 1 cut(s) 65
MhlI GDGCHC 2 cut(s) 176, 212
MluCI AATT 4 cut(s) 133, 185, 346, 384
Mly113I GGCGCC 1 cut(s) 124
MlyI GAGTC 1 cut(s) 94
MnlI CCTC 8 cut(s) 121, 137, 154, 234, 242, 311, 380, 457
MspR9I CCNGG 3 cut(s) 103, 213, 274
MvaI CCWGG 3 cut(s) 103, 213, 274
MwoI GCNNNNNNNGC 1 cut(s) 71
NarI GGCGCC 1 cut(s) 124
NdeII GATC 1 cut(s) 442
NlaIII CATG 1 cut(s) 329
NlaIV GGNNCC 4 cut(s) 125, 210, 245, 271
NmuCI GTSAC 1 cut(s) 285
PfeI GAWTC 1 cut(s) 107
PkrI GCNGC 2 cut(s) 64, 67
PleI GAGTC 1 cut(s) 93
PluTI GGCGCC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 93
PpuMI RGGWCCY 1 cut(s) 269
Psp5II RGGWCCY 1 cut(s) 269
Psp6I CCWGG 3 cut(s) 101, 211, 272
PspGI CCWGG 3 cut(s) 101, 211, 272
PspN4I GGNNCC 4 cut(s) 125, 210, 245, 271
PspOMI GGGCCC 1 cut(s) 208
PspPI GGNCC 3 cut(s) 208, 209, 269
PspPPI RGGWCCY 1 cut(s) 269
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
SatI GCNGC 2 cut(s) 63, 66
Sau3AI GATC 1 cut(s) 442
Sau96I GGNCC 3 cut(s) 208, 209, 269
SchI GAGTC 1 cut(s) 94
ScrFI CCNGG 3 cut(s) 103, 213, 274
SduI GDGCHC 2 cut(s) 176, 212
SfcI CTRYAG 2 cut(s) 18, 291
SfoI GGCGCC 1 cut(s) 125
SinI GGWCC 1 cut(s) 269
SmlI CTYRAG 2 cut(s) 203, 371
SmoI CTYRAG 2 cut(s) 203, 371
Sse9I AATT 4 cut(s) 133, 185, 346, 384
SsiI CCGC 1 cut(s) 62
SspDI GGCGCC 1 cut(s) 123
StyD4I CCNGG 3 cut(s) 101, 211, 272
TaiI ACGT 1 cut(s) 287
TaqI TCGA 1 cut(s) 237
TasI AATT 4 cut(s) 133, 185, 346, 384
TauI GCSGC 1 cut(s) 65
TfiI GAWTC 1 cut(s) 107
TseFI GTSAC 1 cut(s) 285
TseI GCWGC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 285
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 328
VpaK11BI GGWCC 1 cut(s) 269
XapI RAATTY 2 cut(s) 185, 384
XcmI CCANNNNNNNNNTGG 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.