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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43750 |
| fragaria_vesca | FvH4_4g02220 FvH4_4g02220 |
| malus_domestica | MD11G1069500.v1.1 |
| prunus_persica | Prupe.1G026900_v2.0.a1 |
| pyrus_communis | pycom11g05790 |
| rosa_chinensis | RchiOBHm_Chr4g0389531 |
| rosa_laevigata | RLG00000009976 |
| rosa_multiflora | Rmu_sc0002498.1_g000005 Rmu_sc0016342.1_g000010 |
| rosa_roxburghii | Rroxscaffold_5G00335490 |
| rosa_rugosa | Rorug03G0323700 Rorug03G0323700 |
| rosa_samantha | Rh4AG028100 Rh4BG021200 Rh4CG030000 Rh4DG021800 |
| rosa_wichuraiana | Rw0G017320 Rw4G002040 Rw4G002080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 270 |
| AccII | CGCG | 2 cut(s) | 23, 176 |
| AciI | CCGC | 3 cut(s) | 5, 23, 176 |
| AclWI | GGATC | 2 cut(s) | 309, 322 |
| AfaI | GTAC | 3 cut(s) | 125, 420, 431 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 421 |
| AgsI | TTSAA | 3 cut(s) | 160, 335, 592 |
| AluBI | AGCT | 4 cut(s) | 57, 64, 167, 542 |
| AluI | AGCT | 4 cut(s) | 57, 64, 167, 542 |
| Alw21I | GWGCWC | 1 cut(s) | 544 |
| Alw26I | GTCTC | 1 cut(s) | 215 |
| AlwI | GGATC | 2 cut(s) | 309, 322 |
| Ama87I | CYCGRG | 1 cut(s) | 75 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| AspLEI | GCGC | 1 cut(s) | 41 |
| AsuC2I | CCSGG | 1 cut(s) | 423 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 269 |
| AvaI | CYCGRG | 1 cut(s) | 75 |
| BaeGI | GKGCMC | 2 cut(s) | 48, 273 |
| BamHI | GGATCC | 1 cut(s) | 314 |
| BanI | GGYRCC | 1 cut(s) | 270 |
| BanII | GRGCYC | 1 cut(s) | 544 |
| BauI | CACGAG | 1 cut(s) | 543 |
| BbsI | GAAGAC | 2 cut(s) | 207, 333 |
| Bbv12I | GWGCWC | 1 cut(s) | 544 |
| BbvI | GCAGC | 1 cut(s) | 176 |
| BccI | CCATC | 2 cut(s) | 260, 475 |
| BclI | TGATCA | 1 cut(s) | 97 |
| BcnI | CCSGG | 1 cut(s) | 423 |
| BcoDI | GTCTC | 1 cut(s) | 215 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BglII | AGATCT | 1 cut(s) | 607 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| BmcAI | AGTACT | 1 cut(s) | 431 |
| Bme1390I | CCNGG | 1 cut(s) | 423 |
| BmeT110I | CYCGRG | 1 cut(s) | 75 |
| BmiI | GGNNCC | 3 cut(s) | 272, 316, 445 |
| BmrFI | CCNGG | 1 cut(s) | 423 |
| BmrI | ACTGGG | 1 cut(s) | 411 |
| BmsI | GCATC | 1 cut(s) | 480 |
| BmuI | ACTGGG | 1 cut(s) | 411 |
| BpiI | GAAGAC | 2 cut(s) | 207, 333 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 526, 558 |
| BpuMI | CCSGG | 1 cut(s) | 423 |
| BsaAI | YACGTR | 1 cut(s) | 418 |
| BsaJI | CCNNGG | 1 cut(s) | 422 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 421 |
| Bse118I | RCCGGY | 1 cut(s) | 446 |
| Bse1I | ACTGG | 1 cut(s) | 406 |
| BseDI | CCNNGG | 1 cut(s) | 422 |
| BseGI | GGATG | 1 cut(s) | 411 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 421 |
| BseMII | CTCAG | 2 cut(s) | 67, 530 |
| BseNI | ACTGG | 1 cut(s) | 406 |
| BseRI | GAGGAG | 1 cut(s) | 4 |
| BseSI | GKGCMC | 2 cut(s) | 48, 273 |
| BseXI | GCAGC | 1 cut(s) | 176 |
| BseYI | CCCAGC | 1 cut(s) | 167 |
| Bsh1236I | CGCG | 2 cut(s) | 23, 176 |
| Bsh1285I | CGRYCG | 1 cut(s) | 27 |
| BshNI | GGYRCC | 1 cut(s) | 270 |
| BsiEI | CGRYCG | 1 cut(s) | 27 |
| BsiHKAI | GWGCWC | 1 cut(s) | 544 |
| BsiHKCI | CYCGRG | 1 cut(s) | 75 |
| BsiSI | CCGG | 2 cut(s) | 422, 447 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 421 |
| BsmAI | GTCTC | 1 cut(s) | 215 |
| BsmI | GAATGC | 1 cut(s) | 166 |
| BsoBI | CYCGRG | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 3 cut(s) | 48, 273, 544 |
| Bsp143I | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| BspACI | CCGC | 3 cut(s) | 5, 23, 176 |
| BspCNI | CTCAG | 2 cut(s) | 66, 529 |
| BspFNI | CGCG | 2 cut(s) | 23, 176 |
| BspLI | GGNNCC | 3 cut(s) | 272, 316, 445 |
| BspPI | GGATC | 2 cut(s) | 309, 322 |
| BspT107I | GGYRCC | 1 cut(s) | 270 |
| BsrFI | RCCGGY | 1 cut(s) | 446 |
| BsrI | ACTGG | 1 cut(s) | 406 |
| BssAI | RCCGGY | 1 cut(s) | 446 |
| BssECI | CCNNGG | 1 cut(s) | 422 |
| BssMI | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| BssSI | CACGAG | 1 cut(s) | 543 |
| Bst2BI | CACGAG | 1 cut(s) | 543 |
| Bst4CI | ACNGT | 3 cut(s) | 230, 625, 631 |
| Bst6I | CTCTTC | 1 cut(s) | 647 |
| BstBAI | YACGTR | 1 cut(s) | 418 |
| BstDEI | CTNAG | 2 cut(s) | 53, 516 |
| BstF5I | GGATG | 1 cut(s) | 411 |
| BstFNI | CGCG | 2 cut(s) | 23, 176 |
| BstHHI | GCGC | 1 cut(s) | 41 |
| BstKTI | GATC | 5 cut(s) | 100, 193, 214, 317, 610 |
| BstMAI | GTCTC | 1 cut(s) | 215 |
| BstMBI | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| BstMCI | CGRYCG | 1 cut(s) | 27 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstSCI | CCNGG | 1 cut(s) | 421 |
| BstSLI | GKGCMC | 2 cut(s) | 48, 273 |
| BstUI | CGCG | 2 cut(s) | 23, 176 |
| BstV1I | GCAGC | 1 cut(s) | 176 |
| BstV2I | GAAGAC | 2 cut(s) | 207, 333 |
| BstX2I | RGATCY | 2 cut(s) | 314, 607 |
| BstYI | RGATCY | 2 cut(s) | 314, 607 |
| BtsCI | GGATG | 1 cut(s) | 411 |
| BtsIMutI | CAGTG | 1 cut(s) | 621 |
| CfoI | GCGC | 1 cut(s) | 41 |
| Cfr10I | RCCGGY | 1 cut(s) | 446 |
| Csp6I | GTAC | 3 cut(s) | 124, 419, 430 |
| CviAII | CATG | 5 cut(s) | 209, 238, 375, 529, 574 |
| CviQI | GTAC | 3 cut(s) | 124, 419, 430 |
| DdeI | CTNAG | 2 cut(s) | 53, 516 |
| DpnI | GATC | 5 cut(s) | 99, 192, 213, 316, 609 |
| DpnII | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| Eam1104I | CTCTTC | 1 cut(s) | 647 |
| EarI | CTCTTC | 1 cut(s) | 647 |
| Ecl136II | GAGCTC | 1 cut(s) | 542 |
| Eco24I | GRGCYC | 1 cut(s) | 544 |
| Eco53kI | GAGCTC | 1 cut(s) | 542 |
| Eco88I | CYCGRG | 1 cut(s) | 75 |
| EcoICRI | GAGCTC | 1 cut(s) | 542 |
| EcoT38I | GRGCYC | 1 cut(s) | 544 |
| FaeI | CATG | 5 cut(s) | 212, 241, 378, 532, 577 |
| FatI | CATG | 5 cut(s) | 208, 237, 374, 528, 573 |
| FbaI | TGATCA | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| FokI | GGATG | 1 cut(s) | 418 |
| FriOI | GRGCYC | 1 cut(s) | 544 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GlaI | GCGC | 1 cut(s) | 40 |
| GluI | GCNGC | 1 cut(s) | 165 |
| GsaI | CCCAGC | 1 cut(s) | 171 |
| HapII | CCGG | 2 cut(s) | 422, 447 |
| HhaI | GCGC | 1 cut(s) | 41 |
| Hin1II | CATG | 5 cut(s) | 212, 241, 378, 532, 577 |
| Hin6I | GCGC | 1 cut(s) | 39 |
| HinP1I | GCGC | 1 cut(s) | 39 |
| HpaII | CCGG | 2 cut(s) | 422, 447 |
| HphI | GGTGA | 2 cut(s) | 107, 269 |
| Hpy166II | GTNNAC | 1 cut(s) | 456 |
| Hpy188I | TCNGA | 3 cut(s) | 102, 443, 519 |
| Hpy188III | TCNNGA | 1 cut(s) | 545 |
| Hpy8I | GTNNAC | 1 cut(s) | 456 |
| HpyAV | CCTTC | 2 cut(s) | 281, 631 |
| HpyCH4III | ACNGT | 3 cut(s) | 230, 625, 631 |
| HpyCH4IV | ACGT | 1 cut(s) | 417 |
| HpyCH4V | TGCA | 3 cut(s) | 164, 392, 471 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HpyF3I | CTNAG | 2 cut(s) | 53, 516 |
| HpySE526I | ACGT | 1 cut(s) | 417 |
| Hsp92II | CATG | 5 cut(s) | 212, 241, 378, 532, 577 |
| HspAI | GCGC | 1 cut(s) | 39 |
| Ksp22I | TGATCA | 1 cut(s) | 97 |
| Kzo9I | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| LmnI | GCTCC | 4 cut(s) | 17, 62, 443, 539 |
| Lsp1109I | GCAGC | 1 cut(s) | 176 |
| LweI | GCATC | 1 cut(s) | 480 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MaeII | ACGT | 1 cut(s) | 417 |
| MaeIII | GTNAC | 2 cut(s) | 545, 625 |
| MalI | GATC | 5 cut(s) | 99, 192, 213, 316, 609 |
| MboI | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| MboII | GAAGA | 6 cut(s) | 151, 212, 254, 338, 646, 653 |
| MfeI | CAATTG | 1 cut(s) | 393 |
| MflI | RGATCY | 2 cut(s) | 314, 607 |
| MhlI | GDGCHC | 3 cut(s) | 48, 273, 544 |
| MluCI | AATT | 2 cut(s) | 119, 393 |
| MnlI | CCTC | 7 cut(s) | 25, 29, 100, 124, 286, 525, 528 |
| MseI | TTAA | 1 cut(s) | 249 |
| MslI | CAYNNNNRTG | 1 cut(s) | 479 |
| MspA1I | CMGCKG | 1 cut(s) | 167 |
| MspI | CCGG | 2 cut(s) | 422, 447 |
| MspR9I | CCNGG | 1 cut(s) | 423 |
| MunI | CAATTG | 1 cut(s) | 393 |
| Mva1269I | GAATGC | 1 cut(s) | 166 |
| MvnI | CGCG | 2 cut(s) | 23, 176 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NciI | CCSGG | 1 cut(s) | 423 |
| NdeII | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| NlaIII | CATG | 5 cut(s) | 212, 241, 378, 532, 577 |
| NlaIV | GGNNCC | 3 cut(s) | 272, 316, 445 |
| NmuCI | GTSAC | 2 cut(s) | 545, 625 |
| PctI | GAATGC | 1 cut(s) | 166 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| Ppu21I | YACGTR | 1 cut(s) | 418 |
| Psp124BI | GAGCTC | 1 cut(s) | 544 |
| PspFI | CCCAGC | 1 cut(s) | 167 |
| PspN4I | GGNNCC | 3 cut(s) | 272, 316, 445 |
| PsuI | RGATCY | 2 cut(s) | 314, 607 |
| PvuII | CAGCTG | 1 cut(s) | 167 |
| RsaI | GTAC | 3 cut(s) | 125, 420, 431 |
| RsaNI | GTAC | 3 cut(s) | 124, 419, 430 |
| RseI | CAYNNNNRTG | 1 cut(s) | 479 |
| SacI | GAGCTC | 1 cut(s) | 544 |
| SaqAI | TTAA | 1 cut(s) | 249 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau3AI | GATC | 5 cut(s) | 97, 190, 211, 314, 607 |
| ScaI | AGTACT | 1 cut(s) | 431 |
| ScrFI | CCNGG | 1 cut(s) | 423 |
| SduI | GDGCHC | 3 cut(s) | 48, 273, 544 |
| SetI | ASST | 7 cut(s) | 59, 66, 116, 158, 169, 420, 544 |
| SfaNI | GCATC | 1 cut(s) | 480 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 479 |
| Sse9I | AATT | 2 cut(s) | 119, 393 |
| SsiI | CCGC | 3 cut(s) | 5, 23, 176 |
| SspMI | CTAG | 1 cut(s) | 153 |
| SstI | GAGCTC | 1 cut(s) | 544 |
| StyD4I | CCNGG | 1 cut(s) | 421 |
| TaaI | ACNGT | 3 cut(s) | 230, 625, 631 |
| TaiI | ACGT | 1 cut(s) | 420 |
| TaqI | TCGA | 1 cut(s) | 68 |
| TasI | AATT | 2 cut(s) | 119, 393 |
| TatI | WGTACW | 1 cut(s) | 429 |
| Tru1I | TTAA | 1 cut(s) | 249 |
| Tru9I | TTAA | 1 cut(s) | 249 |
| TscAI | CASTG | 1 cut(s) | 628 |
| TseFI | GTSAC | 2 cut(s) | 545, 625 |
| TseI | GCWGC | 1 cut(s) | 164 |
| Tsp45I | GTSAC | 2 cut(s) | 545, 625 |
| TspDTI | ATGAA | 1 cut(s) | 590 |
| TspGWI | ACGGA | 1 cut(s) | 141 |
| TspRI | CASTG | 1 cut(s) | 628 |
| XspI | CTAG | 1 cut(s) | 153 |
| ZrmI | AGTACT | 1 cut(s) | 431 |