Prupe.1G067200_v2.0.a1

Galacturonokinase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
4796600 .. 4806483
9884 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G067200.1

Sequence Viewer

Length: 1296 bp
ATGGGTGAGTGGTCTTGGCCTTCTGAAGCTCAGTTAAATGGAATTAGGCAGACAGTTTCAGAAATGGCTGGGAGAGGTATCGAAGACGTTCGGGTTGTAGTTTCTCCTTATCGAATTTGTCCATTAGGAGCTCATATTGATCACCAGGGAGGGACTGTATCAGCTATGACAATTAATAAGGGAATACTTCTAGGTTTTGTTCCTTCCGGTGACACTCAGGTTATACTGCGTTCAGGACAGTTTAAAGGTGAAGCTAGGTTCAGAGTTGATGAAGTTCAATGCCCTAGGAAGAATGCAAATGATGGTTCCGAAATAGAAATAGATGAAGAAAGCGATTGGGGAAGTTATGCAAGAGGAGCCCTCTATGCATTACAGAGTGGGCAGAACTCTCTTGTCCAGGGTATCATAGGATATATAATAGGTCCTGAAGGTATGGACAGTTCAGGCCTGAGCTCCTCTGCTGCCGTTGGCGTAGCTTACCTAATGGCTTTGGAAACTGCAAATAACTTAGCTGTGTCCCCTGAAGAGAATATTGAGTATGATCGGCTGATTGAAAATGAATTTTGGGGCCTGCGAAATGGGATATTGGATCAATCAGCCATATTGCTTTCAAGCTATGGTTGTCTATTGTGCATGAACTGCAAGACTAAAGAACATAAGCTTATACACCCACCAAAACTGGGAGAGAACCACGAGACTGAGTGGCAGAAAGCATACAAAATATTATTGGCATTTTCAGGCTTGAAGCATAATTTGACTGTAAATCCTGGATATAATCGTCGAGTTGCAGAGTGTCAAGAGGCCGCGGCAGTTCTTTTGCATGCATCCGGAGATGGTGCAGCAGAGCCACTCCTATCTAATGTTGAGCCAGAAGCTTATCAAACTCACAAGCACATATTAGAACCTAATTTAGCCAAGAGAGCAGAGCATTATTTCTCAGAAAATATGCGGGTTAGCAAAGGATTCGAAGCTTGGGCTTCAGGCAGGTTCGAAGATTTTGGAACGCTCATTTCAGAATCTGGCCTAAGTTCTATTCAGAACTATGAATGCGGTTCTGAACCACTGATACAATTGCGCCAGATCCTTCTAAGGGCTCCTGGCGTATTTGGAGCACGGTTCAGTGGTGCAGGATTTAGAGGGTGCTGTGTTGCACTGGTAGATACTGATCATGCAGCTGAAGCTGCAACATTTGTCAGCGAAGAGTACAACAAGGTCCAACCTGAGTTGGCAAGCCTGTTAAACCCAGACACAGCGGTTATGATATGCGAGGCTGGTGACTGTGCCCGTGTTATTTGA

Protein Analysis

432

Amino Acids

46.88

Weight (kDa)

5.01

Isoelectric Point (pI)

46.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 975
AccII CGCG 1 cut(s) 806
AccIII TCCGGA 1 cut(s) 827
AciI CCGC 5 cut(s) 804, 806, 949, 1050, 1253
AclWI GGATC 2 cut(s) 597, 1075
AcsI RAATTY 2 cut(s) 114, 560
AcuI CTGAAG 5 cut(s) 45, 447, 543, 963, 1197
AfaI GTAC 1 cut(s) 1205
AfiI CCNNNNNNNGG 2 cut(s) 680, 1090
AgsI TTSAA 4 cut(s) 278, 554, 612, 745
AjnI CCWGG 4 cut(s) 144, 396, 766, 1096
Alw21I GWGCWC 3 cut(s) 133, 455, 1114
Alw26I GTCTC 1 cut(s) 689
AlwI GGATC 2 cut(s) 597, 1075
AlwNI CAGNNNCTG 1 cut(s) 1019
Aor13HI TCCGGA 1 cut(s) 827
AoxI GGCC 5 cut(s) 17, 445, 568, 801, 1021
ApeKI GCWGC 4 cut(s) 461, 839, 1172, 1181
ApoI RAATTY 2 cut(s) 114, 560
AseI ATTAAT 1 cut(s) 174
Asp700I GAANNNNTTC 1 cut(s) 87
AspA2I CCTAGG 1 cut(s) 284
AspLEI GCGC 1 cut(s) 1077
AspS9I GGNCC 3 cut(s) 422, 568, 1213
AsuHPI GGTGA 5 cut(s) 17, 134, 221, 260, 1286
AsuII TTCGAA 2 cut(s) 966, 990
AvaII GGWCC 2 cut(s) 422, 1213
AvrII CCTAGG 1 cut(s) 284
BaeGI GKGCMC 1 cut(s) 1285
BanII GRGCYC 4 cut(s) 133, 361, 455, 1096
BauI CACGAG 1 cut(s) 692
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 3 cut(s) 133, 455, 1114
BbvI GCAGC 4 cut(s) 448, 851, 1168, 1184
BccI CCATC 2 cut(s) 296, 827
BceAI ACGGC 1 cut(s) 449
BcgI CGANNNNNNTGC 2 cut(s) 946, 980
BciT130I CCWGG 4 cut(s) 146, 398, 768, 1098
BclI TGATCA 2 cut(s) 139, 1165
BcoDI GTCTC 1 cut(s) 689
BfaI CTAG 3 cut(s) 191, 255, 285
BfuAI ACCTGC 1 cut(s) 975
BisI GCNGC 6 cut(s) 462, 804, 807, 840, 1173, 1182
BlnI CCTAGG 1 cut(s) 284
BlsI GCNGC 6 cut(s) 463, 805, 808, 841, 1174, 1183
Bme1390I CCNGG 4 cut(s) 146, 398, 768, 1098
Bme18I GGWCC 2 cut(s) 422, 1213
BmgT120I GGNCC 3 cut(s) 422, 568, 1213
BmiI GGNNCC 4 cut(s) 307, 358, 569, 1095
BmrFI CCNGG 4 cut(s) 146, 398, 768, 1098
BmrI ACTGGG 1 cut(s) 689
BmsI GCATC 1 cut(s) 833
BmuI ACTGGG 1 cut(s) 689
BpiI GAAGAC 1 cut(s) 90
BplI GAGNNNNNCTC 2 cut(s) 345, 377
Bpu10I CCTNAGC 1 cut(s) 449
Bpu14I TTCGAA 2 cut(s) 966, 990
BsaBI GATNNNNATC 1 cut(s) 1164
BsaJI CCNNGG 4 cut(s) 145, 284, 397, 804
BsaWI WCCGGW 2 cut(s) 206, 827
BsaXI ACNNNNNCTCC 2 cut(s) 141, 171
Bsc4I CCNNNNNNNGG 2 cut(s) 680, 1090
Bse1I ACTGG 2 cut(s) 684, 1158
Bse8I GATNNNNATC 1 cut(s) 1164
BseAI TCCGGA 1 cut(s) 827
BseBI CCWGG 4 cut(s) 146, 398, 768, 1098
BseDI CCNNGG 4 cut(s) 145, 284, 397, 804
BseGI GGATG 1 cut(s) 824
BseJI GATNNNNATC 1 cut(s) 1164
BseLI CCNNNNNNNGG 2 cut(s) 680, 1090
BseMII CTCAG 6 cut(s) 44, 230, 440, 690, 951, 1212
BseNI ACTGG 2 cut(s) 684, 1158
BseRI GAGGAG 2 cut(s) 369, 445
BseSI GKGCMC 1 cut(s) 1285
BseXI GCAGC 4 cut(s) 448, 851, 1168, 1184
BseYI CCCAGC 1 cut(s) 68
BsgI GTGCAG 2 cut(s) 858, 1146
Bsh1236I CGCG 1 cut(s) 806
BshFI GGCC 5 cut(s) 19, 447, 570, 803, 1023
BsiHKAI GWGCWC 3 cut(s) 133, 455, 1114
BsiSI CCGG 2 cut(s) 207, 828
BslFI GGGAC 2 cut(s) 166, 502
BslI CCNNNNNNNGG 2 cut(s) 680, 1090
BsmAI GTCTC 1 cut(s) 689
BsmFI GGGAC 2 cut(s) 166, 502
BsmI GAATGC 2 cut(s) 298, 1052
BsnI GGCC 5 cut(s) 19, 447, 570, 803, 1023
Bsp119I TTCGAA 2 cut(s) 966, 990
Bsp1286I GDGCHC 6 cut(s) 133, 361, 455, 1096, 1114, 1285
Bsp13I TCCGGA 1 cut(s) 827
Bsp143I GATC 5 cut(s) 139, 541, 589, 1080, 1165
BspACI CCGC 5 cut(s) 804, 806, 949, 1050, 1253
BspANI GGCC 5 cut(s) 19, 447, 570, 803, 1023
BspCNI CTCAG 6 cut(s) 43, 229, 441, 691, 950, 1213
BspEI TCCGGA 1 cut(s) 827
BspFNI CGCG 1 cut(s) 806
BspLI GGNNCC 4 cut(s) 307, 358, 569, 1095
BspMI ACCTGC 1 cut(s) 975
BspPI GGATC 2 cut(s) 597, 1075
BspT104I TTCGAA 2 cut(s) 966, 990
BsrI ACTGG 2 cut(s) 684, 1158
BssECI CCNNGG 4 cut(s) 145, 284, 397, 804
BssMI GATC 5 cut(s) 139, 541, 589, 1080, 1165
BssSI CACGAG 1 cut(s) 692
BssT1I CCWWGG 1 cut(s) 284
Bst2BI CACGAG 1 cut(s) 692
Bst2UI CCWGG 4 cut(s) 146, 398, 768, 1098
Bst4CI ACNGT 7 cut(s) 55, 157, 240, 440, 760, 1116, 1280
Bst6I CTCTTC 2 cut(s) 519, 1194
BstAPI GCANNNNNTGC 1 cut(s) 639
BstBI TTCGAA 2 cut(s) 966, 990
BstC8I GCNNGC 3 cut(s) 572, 822, 1231
BstDEI CTNAG 9 cut(s) 30, 216, 449, 508, 699, 937, 1025, 1088, 1221
BstDSI CCRYGG 1 cut(s) 804
BstF5I GGATG 1 cut(s) 824
BstFNI CGCG 1 cut(s) 806
BstHHI GCGC 1 cut(s) 1077
BstKTI GATC 5 cut(s) 142, 544, 592, 1083, 1168
BstMAI GTCTC 1 cut(s) 689
BstMBI GATC 5 cut(s) 139, 541, 589, 1080, 1165
BstMWI GCNNNNNNNGC 6 cut(s) 356, 365, 639, 920, 1178, 1181
BstNI CCWGG 4 cut(s) 146, 398, 768, 1098
BstNSI RCATGY 1 cut(s) 824
BstSCI CCNGG 4 cut(s) 144, 396, 766, 1096
BstSLI GKGCMC 1 cut(s) 1285
BstUI CGCG 1 cut(s) 806
BstV1I GCAGC 4 cut(s) 448, 851, 1168, 1184
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 1 cut(s) 1080
BstYI RGATCY 1 cut(s) 1080
BsuRI GGCC 5 cut(s) 19, 447, 570, 803, 1023
BtgI CCRYGG 1 cut(s) 804
BtsCI GGATG 1 cut(s) 824
BtsIMutI CAGTG 3 cut(s) 1061, 1126, 1151
BveI ACCTGC 1 cut(s) 975
Cac8I GCNNGC 3 cut(s) 572, 822, 1231
CaiI CAGNNNCTG 1 cut(s) 1019
CfoI GCGC 1 cut(s) 1077
Cfr13I GGNCC 3 cut(s) 422, 568, 1213
Cfr42I CCGCGG 1 cut(s) 807
Csp6I GTAC 1 cut(s) 1204
CviAII CATG 3 cut(s) 634, 821, 1169
CviQI GTAC 1 cut(s) 1204
DdeI CTNAG 9 cut(s) 30, 216, 449, 508, 699, 937, 1025, 1088, 1221
DpnI GATC 5 cut(s) 141, 543, 591, 1082, 1167
DpnII GATC 5 cut(s) 139, 541, 589, 1080, 1165
DraI TTTAAA 1 cut(s) 244
Eam1104I CTCTTC 2 cut(s) 519, 1194
EarI CTCTTC 2 cut(s) 519, 1194
Ecl136II GAGCTC 2 cut(s) 131, 453
Eco130I CCWWGG 1 cut(s) 284
Eco147I AGGCCT 1 cut(s) 447
Eco24I GRGCYC 4 cut(s) 133, 361, 455, 1096
Eco47I GGWCC 2 cut(s) 422, 1213
Eco53kI GAGCTC 2 cut(s) 131, 453
Eco57I CTGAAG 5 cut(s) 45, 447, 543, 963, 1197
EcoICRI GAGCTC 2 cut(s) 131, 453
EcoO109I RGGNCCY 2 cut(s) 422, 568
EcoRII CCWGG 4 cut(s) 144, 396, 766, 1096
EcoT14I CCWWGG 1 cut(s) 284
EcoT22I ATGCAT 2 cut(s) 370, 826
EcoT38I GRGCYC 4 cut(s) 133, 361, 455, 1096
ErhI CCWWGG 1 cut(s) 284
FaeI CATG 3 cut(s) 637, 824, 1172
FaqI GGGAC 2 cut(s) 166, 502
FatI CATG 3 cut(s) 633, 820, 1168
FauI CCCGC 1 cut(s) 942
FbaI TGATCA 2 cut(s) 139, 1165
Fnu4HI GCNGC 6 cut(s) 462, 804, 807, 840, 1173, 1182
FokI GGATG 1 cut(s) 811
FriOI GRGCYC 4 cut(s) 133, 361, 455, 1096
Fsp4HI GCNGC 6 cut(s) 462, 804, 807, 840, 1173, 1182
FspBI CTAG 3 cut(s) 191, 255, 285
GlaI GCGC 1 cut(s) 1076
GluI GCNGC 6 cut(s) 462, 804, 807, 840, 1173, 1182
GsaI CCCAGC 1 cut(s) 72
HaeIII GGCC 5 cut(s) 19, 447, 570, 803, 1023
HapII CCGG 2 cut(s) 207, 828
HhaI GCGC 1 cut(s) 1077
Hin1II CATG 3 cut(s) 637, 824, 1172
Hin6I GCGC 1 cut(s) 1075
HinP1I GCGC 1 cut(s) 1075
HindIII AAGCTT 3 cut(s) 659, 873, 969
HinfI GANTC 2 cut(s) 963, 1016
HpaII CCGG 2 cut(s) 207, 828
HphI GGTGA 5 cut(s) 17, 134, 221, 260, 1286
Hpy188I TCNGA 8 cut(s) 25, 61, 263, 310, 940, 1015, 1038, 1057
Hpy188III TCNNGA 4 cut(s) 234, 425, 797, 828
Hpy99I CGWCG 1 cut(s) 783
HpyAV CCTTC 4 cut(s) 30, 213, 422, 1094
HpyCH4III ACNGT 7 cut(s) 55, 157, 240, 440, 760, 1116, 1280
HpyCH4IV ACGT 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 6 cut(s) 356, 365, 639, 920, 1178, 1181
HpyF3I CTNAG 9 cut(s) 30, 216, 449, 508, 699, 937, 1025, 1088, 1221
HpySE526I ACGT 1 cut(s) 87
Hsp92II CATG 3 cut(s) 637, 824, 1172
HspAI GCGC 1 cut(s) 1075
Kpn2I TCCGGA 1 cut(s) 827
Ksp22I TGATCA 2 cut(s) 139, 1165
KspI CCGCGG 1 cut(s) 807
Kzo9I GATC 5 cut(s) 139, 541, 589, 1080, 1165
LmnI GCTCC 5 cut(s) 128, 356, 458, 1099, 1109
Lsp1109I GCAGC 4 cut(s) 448, 851, 1168, 1184
LweI GCATC 1 cut(s) 833
MaeI CTAG 3 cut(s) 191, 255, 285
MaeII ACGT 1 cut(s) 87
MaeIII GTNAC 2 cut(s) 209, 1274
MalI GATC 5 cut(s) 141, 543, 591, 1082, 1167
MboI GATC 5 cut(s) 139, 541, 589, 1080, 1165
MboII GAAGA 6 cut(s) 95, 301, 338, 536, 1004, 1211
MfeI CAATTG 1 cut(s) 1070
MflI RGATCY 1 cut(s) 1080
MhlI GDGCHC 6 cut(s) 133, 361, 455, 1096, 1114, 1285
MluCI AATT 7 cut(s) 42, 114, 171, 560, 751, 907, 1070
MmeI TCCRAC 1 cut(s) 1240
MnlI CCTC 8 cut(s) 68, 143, 347, 371, 466, 793, 1130, 1261
Mph1103I ATGCAT 2 cut(s) 370, 826
MroI TCCGGA 1 cut(s) 827
MroXI GAANNNNTTC 1 cut(s) 87
MseI TTAA 4 cut(s) 35, 174, 243, 1238
MspA1I CMGCKG 3 cut(s) 806, 1175, 1253
MspI CCGG 2 cut(s) 207, 828
MspR9I CCNGG 4 cut(s) 146, 398, 768, 1098
MunI CAATTG 1 cut(s) 1070
Mva1269I GAATGC 2 cut(s) 298, 1052
MvaI CCWGG 4 cut(s) 146, 398, 768, 1098
MvnI CGCG 1 cut(s) 806
MwoI GCNNNNNNNGC 6 cut(s) 356, 365, 639, 920, 1178, 1181
NdeII GATC 5 cut(s) 139, 541, 589, 1080, 1165
NlaIII CATG 3 cut(s) 637, 824, 1172
NlaIV GGNNCC 4 cut(s) 307, 358, 569, 1095
NmuCI GTSAC 2 cut(s) 209, 1274
NsiI ATGCAT 2 cut(s) 370, 826
NspI RCATGY 1 cut(s) 824
NspV TTCGAA 2 cut(s) 966, 990
PaeI GCATGC 1 cut(s) 824
PceI AGGCCT 1 cut(s) 447
PctI GAATGC 2 cut(s) 298, 1052
PdmI GAANNNNTTC 1 cut(s) 87
PfeI GAWTC 2 cut(s) 963, 1016
PfoI TCCNGGA 1 cut(s) 766
PkrI GCNGC 6 cut(s) 463, 805, 808, 841, 1174, 1183
PpuMI RGGWCCY 1 cut(s) 422
PshBI ATTAAT 1 cut(s) 174
Psp124BI GAGCTC 2 cut(s) 133, 455
Psp5II RGGWCCY 1 cut(s) 422
Psp6I CCWGG 4 cut(s) 144, 396, 766, 1096
PspFI CCCAGC 1 cut(s) 68
PspGI CCWGG 4 cut(s) 144, 396, 766, 1096
PspN4I GGNNCC 4 cut(s) 307, 358, 569, 1095
PspPI GGNCC 3 cut(s) 422, 568, 1213
PspPPI RGGWCCY 1 cut(s) 422
PsrI GAACNNNNNNTAC 4 cut(s) 424, 456, 1050, 1082
PstNI CAGNNNCTG 1 cut(s) 1019
PsuI RGATCY 1 cut(s) 1080
PvuII CAGCTG 1 cut(s) 1175
RsaI GTAC 1 cut(s) 1205
RsaNI GTAC 1 cut(s) 1204
SacI GAGCTC 2 cut(s) 133, 455
SacII CCGCGG 1 cut(s) 807
SaqAI TTAA 4 cut(s) 35, 174, 243, 1238
SatI GCNGC 6 cut(s) 462, 804, 807, 840, 1173, 1182
Sau3AI GATC 5 cut(s) 139, 541, 589, 1080, 1165
Sau96I GGNCC 3 cut(s) 422, 568, 1213
ScrFI CCNGG 4 cut(s) 146, 398, 768, 1098
SduI GDGCHC 6 cut(s) 133, 361, 455, 1096, 1114, 1285
SfaNI GCATC 1 cut(s) 833
Sfr303I CCGCGG 1 cut(s) 807
SfuI TTCGAA 2 cut(s) 966, 990
SgrBI CCGCGG 1 cut(s) 807
SinI GGWCC 2 cut(s) 422, 1213
SphI GCATGC 1 cut(s) 824
Sse9I AATT 7 cut(s) 42, 114, 171, 560, 751, 907, 1070
SseBI AGGCCT 1 cut(s) 447
SsiI CCGC 5 cut(s) 804, 806, 949, 1050, 1253
SspI AATATT 2 cut(s) 532, 723
SspMI CTAG 3 cut(s) 191, 255, 285
SstI GAGCTC 2 cut(s) 133, 455
StuI AGGCCT 1 cut(s) 447
StyD4I CCNGG 4 cut(s) 144, 396, 766, 1096
StyI CCWWGG 1 cut(s) 284
TaaI ACNGT 7 cut(s) 55, 157, 240, 440, 760, 1116, 1280
TaiI ACGT 1 cut(s) 90
TaqI TCGA 5 cut(s) 81, 112, 781, 966, 990
TasI AATT 7 cut(s) 42, 114, 171, 560, 751, 907, 1070
TatI WGTACW 1 cut(s) 1203
TauI GCSGC 2 cut(s) 806, 809
TfiI GAWTC 2 cut(s) 963, 1016
Tru1I TTAA 4 cut(s) 35, 174, 243, 1238
Tru9I TTAA 4 cut(s) 35, 174, 243, 1238
TscAI CASTG 3 cut(s) 1068, 1126, 1158
TseFI GTSAC 2 cut(s) 209, 1274
TseI GCWGC 4 cut(s) 461, 839, 1172, 1181
Tsp45I GTSAC 2 cut(s) 209, 1274
TspDTI ATGAA 5 cut(s) 285, 339, 573, 650, 1059
TspRI CASTG 3 cut(s) 1068, 1126, 1158
VpaK11BI GGWCC 2 cut(s) 422, 1213
VspI ATTAAT 1 cut(s) 174
XapI RAATTY 2 cut(s) 114, 560
XceI RCATGY 1 cut(s) 824
XmaJI CCTAGG 1 cut(s) 284
XmnI GAANNNNTTC 1 cut(s) 87
XspI CTAG 3 cut(s) 191, 255, 285
Zsp2I ATGCAT 2 cut(s) 370, 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.