Plant transposase (Ptta/En/Spm family)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1254 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1789 |
| AccBSI | CCGCTC | 1 cut(s) | 313 |
| AccI | GTMKAC | 2 cut(s) | 1959, 2276 |
| AciI | CCGC | 4 cut(s) | 311, 1491, 1949, 2220 |
| AclWI | GGATC | 7 cut(s) | 257, 605, 1796, 1863, 2230, 2479, 2736 |
| AcoI | YGGCCR | 4 cut(s) | 411, 2106, 2262, 2602 |
| AcsI | RAATTY | 9 cut(s) | 34, 158, 538, 624, 760, 1018, 1193, 1755, 2529 |
| AcuI | CTGAAG | 4 cut(s) | 1731, 1862, 2544, 2571 |
| AdeI | CACNNNGTG | 1 cut(s) | 1067 |
| AfaI | GTAC | 7 cut(s) | 13, 207, 563, 840, 1187, 1325, 1875 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 123, 317, 815, 938, 1212, 1789, 2271 |
| AhlI | ACTAGT | 1 cut(s) | 1841 |
| AjnI | CCWGG | 3 cut(s) | 116, 478, 1051 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1786, 1818 |
| Alw21I | GWGCWC | 3 cut(s) | 1115, 1350, 1626 |
| Alw26I | GTCTC | 5 cut(s) | 786, 835, 1052, 1997, 2442 |
| Alw44I | GTGCAC | 2 cut(s) | 1111, 1622 |
| AlwI | GGATC | 7 cut(s) | 257, 605, 1796, 1863, 2230, 2479, 2736 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1085 |
| ApaLI | GTGCAC | 2 cut(s) | 1111, 1622 |
| ApoI | RAATTY | 9 cut(s) | 34, 158, 538, 624, 760, 1018, 1193, 1755, 2529 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 813, 845, 2114, 2146 |
| AseI | ATTAAT | 1 cut(s) | 1430 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 34 |
| AspS9I | GGNCC | 4 cut(s) | 475, 1031, 1203, 1540 |
| AsuC2I | CCSGG | 1 cut(s) | 384 |
| AsuHPI | GGTGA | 6 cut(s) | 521, 721, 1041, 1451, 1486, 2132 |
| AvaII | GGWCC | 2 cut(s) | 1203, 1540 |
| AxyI | CCTNAGG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| BaeGI | GKGCMC | 2 cut(s) | 1115, 1626 |
| BalI | TGGCCA | 3 cut(s) | 413, 2108, 2604 |
| BanII | GRGCYC | 1 cut(s) | 1350 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 946, 978 |
| BauI | CACGAG | 2 cut(s) | 273, 2439 |
| BbsI | GAAGAC | 3 cut(s) | 671, 1035, 1719 |
| Bbv12I | GWGCWC | 3 cut(s) | 1115, 1350, 1626 |
| BceAI | ACGGC | 1 cut(s) | 916 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 264, 298, 1490, 1524 |
| BciT130I | CCWGG | 3 cut(s) | 118, 480, 1053 |
| BciVI | GTATCC | 1 cut(s) | 1498 |
| BclI | TGATCA | 2 cut(s) | 511, 1009 |
| BcnI | CCSGG | 1 cut(s) | 384 |
| BcoDI | GTCTC | 5 cut(s) | 786, 835, 1052, 1997, 2442 |
| BcuI | ACTAGT | 1 cut(s) | 1841 |
| BfaI | CTAG | 4 cut(s) | 438, 1397, 1842, 2117 |
| BfmI | CTRYAG | 4 cut(s) | 664, 684, 1071, 2097 |
| BfuI | GTATCC | 1 cut(s) | 1498 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 384, 480, 1053 |
| Bme18I | GGWCC | 2 cut(s) | 1203, 1540 |
| BmgT120I | GGNCC | 4 cut(s) | 475, 1031, 1203, 1540 |
| BmiI | GGNNCC | 5 cut(s) | 309, 477, 1032, 1204, 2691 |
| BmrFI | CCNGG | 4 cut(s) | 118, 384, 480, 1053 |
| BmsI | GCATC | 6 cut(s) | 305, 345, 473, 1228, 1552, 2291 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2456 |
| BpiI | GAAGAC | 3 cut(s) | 671, 1035, 1719 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1047, 1079 |
| BpmI | CTGGAG | 2 cut(s) | 139, 1074 |
| BpuEI | CTTGAG | 6 cut(s) | 285, 325, 1206, 1283, 1670, 2705 |
| BpuMI | CCSGG | 1 cut(s) | 384 |
| BsaAI | YACGTR | 1 cut(s) | 561 |
| BsaI | GGTCTC | 2 cut(s) | 786, 1997 |
| BsaJI | CCNNGG | 6 cut(s) | 478, 578, 1102, 1178, 1805, 2673 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 783, 813, 1914, 1944 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 123, 317, 815, 938, 1212, 1789, 2271 |
| Bse118I | RCCGGY | 1 cut(s) | 2540 |
| Bse1I | ACTGG | 4 cut(s) | 721, 1519, 2265, 2458 |
| Bse21I | CCTNAGG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| Bse3DI | GCAATG | 4 cut(s) | 145, 374, 1959, 2109 |
| BseBI | CCWGG | 3 cut(s) | 118, 480, 1053 |
| BseDI | CCNNGG | 6 cut(s) | 478, 578, 1102, 1178, 1805, 2673 |
| BseGI | GGATG | 8 cut(s) | 327, 1003, 1139, 1309, 2282, 2385, 2425, 2605 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 123, 317, 815, 938, 1212, 1789, 2271 |
| BseMI | GCAATG | 4 cut(s) | 145, 374, 1959, 2109 |
| BseMII | CTCAG | 3 cut(s) | 62, 2301, 2574 |
| BseNI | ACTGG | 4 cut(s) | 721, 1519, 2265, 2458 |
| BseRI | GAGGAG | 3 cut(s) | 36, 136, 1785 |
| BseSI | GKGCMC | 2 cut(s) | 1115, 1626 |
| BseYI | CCCAGC | 1 cut(s) | 1565 |
| BsgI | GTGCAG | 2 cut(s) | 1013, 2067 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1115, 1350, 1626 |
| BsiSI | CCGG | 3 cut(s) | 383, 2265, 2541 |
| BslFI | GGGAC | 5 cut(s) | 995, 1216, 1700, 1763, 1994 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 123, 317, 815, 938, 1212, 1789, 2271 |
| BsmAI | GTCTC | 5 cut(s) | 786, 835, 1052, 1997, 2442 |
| BsmFI | GGGAC | 5 cut(s) | 995, 1216, 1700, 1763, 1994 |
| BsmI | GAATGC | 3 cut(s) | 553, 1825, 2403 |
| Bso31I | GGTCTC | 2 cut(s) | 786, 1997 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1115, 1350, 1626 |
| Bsp19I | CCATGG | 1 cut(s) | 1102 |
| BspACI | CCGC | 4 cut(s) | 311, 1491, 1949, 2220 |
| BspCNI | CTCAG | 3 cut(s) | 61, 2300, 2575 |
| BspHI | TCATGA | 3 cut(s) | 1012, 1834, 2358 |
| BspLI | GGNNCC | 5 cut(s) | 309, 477, 1032, 1204, 2691 |
| BspMAI | CTGCAG | 2 cut(s) | 1075, 2101 |
| BspPI | GGATC | 7 cut(s) | 257, 605, 1796, 1863, 2230, 2479, 2736 |
| BspTNI | GGTCTC | 2 cut(s) | 786, 1997 |
| BsrBI | CCGCTC | 1 cut(s) | 313 |
| BsrDI | GCAATG | 4 cut(s) | 145, 374, 1959, 2109 |
| BsrFI | RCCGGY | 1 cut(s) | 2540 |
| BsrI | ACTGG | 4 cut(s) | 721, 1519, 2265, 2458 |
| BssAI | RCCGGY | 1 cut(s) | 2540 |
| BssECI | CCNNGG | 6 cut(s) | 478, 578, 1102, 1178, 1805, 2673 |
| BssNAI | GTATAC | 2 cut(s) | 1960, 2277 |
| BssSI | CACGAG | 2 cut(s) | 273, 2439 |
| BssT1I | CCWWGG | 5 cut(s) | 578, 1102, 1178, 1805, 2673 |
| Bst1107I | GTATAC | 2 cut(s) | 1960, 2277 |
| Bst2BI | CACGAG | 2 cut(s) | 273, 2439 |
| Bst2UI | CCWGG | 3 cut(s) | 118, 480, 1053 |
| Bst4CI | ACNGT | 9 cut(s) | 592, 1117, 1375, 2041, 2063, 2237, 2271, 2637, 2761 |
| Bst6I | CTCTTC | 2 cut(s) | 1263, 2547 |
| BstBAI | YACGTR | 1 cut(s) | 561 |
| BstC8I | GCNNGC | 5 cut(s) | 287, 1938, 2079, 2542, 2651 |
| BstDEI | CTNAG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| BstDSI | CCRYGG | 1 cut(s) | 1102 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 121, 1210 |
| BstF5I | GGATG | 8 cut(s) | 327, 1003, 1139, 1309, 2282, 2385, 2425, 2605 |
| BstMAI | GTCTC | 5 cut(s) | 786, 835, 1052, 1997, 2442 |
| BstNI | CCWGG | 3 cut(s) | 118, 480, 1053 |
| BstNSI | RCATGY | 3 cut(s) | 900, 1042, 2653 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2456 |
| BstSCI | CCNGG | 4 cut(s) | 116, 382, 478, 1051 |
| BstSFI | CTRYAG | 4 cut(s) | 664, 684, 1071, 2097 |
| BstSLI | GKGCMC | 2 cut(s) | 1115, 1626 |
| BstV2I | GAAGAC | 3 cut(s) | 671, 1035, 1719 |
| BstX2I | RGATCY | 1 cut(s) | 1855 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 585, 2707 |
| BstYI | RGATCY | 1 cut(s) | 1855 |
| BstZ17I | GTATAC | 2 cut(s) | 1960, 2277 |
| Bsu36I | CCTNAGG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| BsuI | GTATCC | 1 cut(s) | 1498 |
| BtgI | CCRYGG | 1 cut(s) | 1102 |
| BtgZI | GCGATG | 1 cut(s) | 1273 |
| BtsCI | GGATG | 8 cut(s) | 327, 1003, 1139, 1309, 2282, 2385, 2425, 2605 |
| BtsI | GCAGTG | 2 cut(s) | 2517, 2660 |
| BtsIMutI | CAGTG | 6 cut(s) | 1113, 2276, 2517, 2633, 2660, 2766 |
| Cac8I | GCNNGC | 5 cut(s) | 287, 1938, 2079, 2542, 2651 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1085 |
| CciI | TCATGA | 3 cut(s) | 1012, 1834, 2358 |
| Cfr10I | RCCGGY | 1 cut(s) | 2540 |
| Cfr13I | GGNCC | 4 cut(s) | 475, 1031, 1203, 1540 |
| CseI | GACGC | 1 cut(s) | 2039 |
| Csp6I | GTAC | 7 cut(s) | 12, 206, 562, 839, 1186, 1324, 1874 |
| CviQI | GTAC | 7 cut(s) | 12, 206, 562, 839, 1186, 1324, 1874 |
| DdeI | CTNAG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| DraI | TTTAAA | 1 cut(s) | 2160 |
| DraIII | CACNNNGTG | 1 cut(s) | 1067 |
| EaeI | YGGCCR | 4 cut(s) | 411, 2106, 2262, 2602 |
| Eam1104I | CTCTTC | 2 cut(s) | 1263, 2547 |
| EarI | CTCTTC | 2 cut(s) | 1263, 2547 |
| EciI | GGCGGA | 1 cut(s) | 1506 |
| Ecl136II | GAGCTC | 1 cut(s) | 1348 |
| Eco130I | CCWWGG | 5 cut(s) | 578, 1102, 1178, 1805, 2673 |
| Eco24I | GRGCYC | 1 cut(s) | 1350 |
| Eco31I | GGTCTC | 2 cut(s) | 786, 1997 |
| Eco47I | GGWCC | 2 cut(s) | 1203, 1540 |
| Eco53kI | GAGCTC | 1 cut(s) | 1348 |
| Eco57I | CTGAAG | 4 cut(s) | 1731, 1862, 2544, 2571 |
| Eco81I | CCTNAGG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| EcoICRI | GAGCTC | 1 cut(s) | 1348 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 121, 1210 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1203 |
| EcoRI | GAATTC | 3 cut(s) | 34, 760, 1755 |
| EcoRII | CCWGG | 3 cut(s) | 116, 478, 1051 |
| EcoT14I | CCWWGG | 5 cut(s) | 578, 1102, 1178, 1805, 2673 |
| EcoT22I | ATGCAT | 2 cut(s) | 466, 1040 |
| EcoT38I | GRGCYC | 1 cut(s) | 1350 |
| ErhI | CCWWGG | 5 cut(s) | 578, 1102, 1178, 1805, 2673 |
| FaqI | GGGAC | 5 cut(s) | 995, 1216, 1700, 1763, 1994 |
| FauNDI | CATATG | 2 cut(s) | 220, 1615 |
| FbaI | TGATCA | 2 cut(s) | 511, 1009 |
| FblI | GTMKAC | 2 cut(s) | 1959, 2276 |
| FokI | GGATG | 8 cut(s) | 334, 1010, 1126, 1316, 2269, 2392, 2432, 2612 |
| FriOI | GRGCYC | 1 cut(s) | 1350 |
| FspBI | CTAG | 4 cut(s) | 438, 1397, 1842, 2117 |
| GsaI | CCCAGC | 1 cut(s) | 1569 |
| GsuI | CTGGAG | 2 cut(s) | 139, 1074 |
| HapII | CCGG | 3 cut(s) | 383, 2265, 2541 |
| HgaI | GACGC | 1 cut(s) | 2039 |
| HincII | GTYRAC | 1 cut(s) | 485 |
| HindII | GTYRAC | 1 cut(s) | 485 |
| HinfI | GANTC | 7 cut(s) | 828, 868, 1385, 1417, 2423, 2578, 2715 |
| HpaII | CCGG | 3 cut(s) | 383, 2265, 2541 |
| HphI | GGTGA | 6 cut(s) | 521, 721, 1041, 1451, 1486, 2132 |
| HpyCH4III | ACNGT | 9 cut(s) | 592, 1117, 1375, 2041, 2063, 2237, 2271, 2637, 2761 |
| HpyCH4IV | ACGT | 5 cut(s) | 560, 704, 776, 1334, 2355 |
| HpyF3I | CTNAG | 5 cut(s) | 48, 1470, 2287, 2583, 2694 |
| HpySE526I | ACGT | 5 cut(s) | 560, 704, 776, 1334, 2355 |
| KroI | GCCGGC | 1 cut(s) | 2540 |
| KroNI | GCCGGC | 1 cut(s) | 2542 |
| Ksp22I | TGATCA | 2 cut(s) | 511, 1009 |
| LmnI | GCTCC | 3 cut(s) | 1772, 2646, 2695 |
| LweI | GCATC | 6 cut(s) | 305, 345, 473, 1228, 1552, 2291 |
| MaeI | CTAG | 4 cut(s) | 438, 1397, 1842, 2117 |
| MaeII | ACGT | 5 cut(s) | 560, 704, 776, 1334, 2355 |
| MaeIII | GTNAC | 6 cut(s) | 777, 877, 961, 2120, 2231, 2458 |
| MbiI | CCGCTC | 1 cut(s) | 313 |
| MfeI | CAATTG | 2 cut(s) | 77, 765 |
| MflI | RGATCY | 1 cut(s) | 1855 |
| MhlI | GDGCHC | 3 cut(s) | 1115, 1350, 1626 |
| MlsI | TGGCCA | 3 cut(s) | 413, 2108, 2604 |
| MluNI | TGGCCA | 3 cut(s) | 413, 2108, 2604 |
| MlyI | GAGTC | 4 cut(s) | 837, 877, 2432, 2572 |
| Mox20I | TGGCCA | 3 cut(s) | 413, 2108, 2604 |
| Mph1103I | ATGCAT | 2 cut(s) | 466, 1040 |
| MroNI | GCCGGC | 1 cut(s) | 2540 |
| MroXI | GAANNNNTTC | 1 cut(s) | 34 |
| MscI | TGGCCA | 3 cut(s) | 413, 2108, 2604 |
| MseI | TTAA | 6 cut(s) | 131, 153, 1430, 2159, 2352, 2367 |
| MslI | CAYNNNNRTG | 4 cut(s) | 801, 1527, 1629, 2406 |
| Msp20I | TGGCCA | 3 cut(s) | 413, 2108, 2604 |
| MspI | CCGG | 3 cut(s) | 383, 2265, 2541 |
| MspR9I | CCNGG | 4 cut(s) | 118, 384, 480, 1053 |
| MunI | CAATTG | 2 cut(s) | 77, 765 |
| Mva1269I | GAATGC | 3 cut(s) | 553, 1825, 2403 |
| MvaI | CCWGG | 3 cut(s) | 118, 480, 1053 |
| NaeI | GCCGGC | 1 cut(s) | 2542 |
| NciI | CCSGG | 1 cut(s) | 384 |
| NcoI | CCATGG | 1 cut(s) | 1102 |
| NdeI | CATATG | 2 cut(s) | 220, 1615 |
| NgoMIV | GCCGGC | 1 cut(s) | 2540 |
| NlaIV | GGNNCC | 5 cut(s) | 309, 477, 1032, 1204, 2691 |
| NmuCI | GTSAC | 3 cut(s) | 777, 2120, 2458 |
| NsiI | ATGCAT | 2 cut(s) | 466, 1040 |
| NspI | RCATGY | 3 cut(s) | 900, 1042, 2653 |
| PaeI | GCATGC | 1 cut(s) | 2653 |
| PagI | TCATGA | 3 cut(s) | 1012, 1834, 2358 |
| PctI | GAATGC | 3 cut(s) | 553, 1825, 2403 |
| PdiI | GCCGGC | 1 cut(s) | 2542 |
| PdmI | GAANNNNTTC | 1 cut(s) | 34 |
| PfeI | GAWTC | 3 cut(s) | 1385, 1417, 2715 |
| PflFI | GACNNNGTC | 1 cut(s) | 797 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1789 |
| PleI | GAGTC | 4 cut(s) | 836, 876, 2431, 2572 |
| PpsI | GAGTC | 4 cut(s) | 836, 876, 2431, 2572 |
| Ppu21I | YACGTR | 1 cut(s) | 561 |
| PpuMI | RGGWCCY | 1 cut(s) | 1203 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2456 |
| PshBI | ATTAAT | 1 cut(s) | 1430 |
| PsiI | TTATAA | 1 cut(s) | 1254 |
| Psp124BI | GAGCTC | 1 cut(s) | 1350 |
| Psp5II | RGGWCCY | 1 cut(s) | 1203 |
| Psp6I | CCWGG | 3 cut(s) | 116, 478, 1051 |
| PspFI | CCCAGC | 1 cut(s) | 1565 |
| PspGI | CCWGG | 3 cut(s) | 116, 478, 1051 |
| PspN4I | GGNNCC | 5 cut(s) | 309, 477, 1032, 1204, 2691 |
| PspPI | GGNCC | 4 cut(s) | 475, 1031, 1203, 1540 |
| PspPPI | RGGWCCY | 1 cut(s) | 1203 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1662, 1694 |
| PstI | CTGCAG | 2 cut(s) | 1075, 2101 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1085 |
| PsuI | RGATCY | 1 cut(s) | 1855 |
| PsyI | GACNNNGTC | 1 cut(s) | 797 |
| RsaI | GTAC | 7 cut(s) | 13, 207, 563, 840, 1187, 1325, 1875 |
| RsaNI | GTAC | 7 cut(s) | 12, 206, 562, 839, 1186, 1324, 1874 |
| RseI | CAYNNNNRTG | 4 cut(s) | 801, 1527, 1629, 2406 |
| SacI | GAGCTC | 1 cut(s) | 1350 |
| SaqAI | TTAA | 6 cut(s) | 131, 153, 1430, 2159, 2352, 2367 |
| Sau96I | GGNCC | 4 cut(s) | 475, 1031, 1203, 1540 |
| SchI | GAGTC | 4 cut(s) | 837, 877, 2432, 2572 |
| ScrFI | CCNGG | 4 cut(s) | 118, 384, 480, 1053 |
| SduI | GDGCHC | 3 cut(s) | 1115, 1350, 1626 |
| SfaNI | GCATC | 6 cut(s) | 305, 345, 473, 1228, 1552, 2291 |
| SfcI | CTRYAG | 4 cut(s) | 664, 684, 1071, 2097 |
| SinI | GGWCC | 2 cut(s) | 1203, 1540 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 801, 1527, 1629, 2406 |
| SmlI | CTYRAG | 6 cut(s) | 300, 340, 1221, 1298, 1649, 2684 |
| SmoI | CTYRAG | 6 cut(s) | 300, 340, 1221, 1298, 1649, 2684 |
| SpeI | ACTAGT | 1 cut(s) | 1841 |
| SphI | GCATGC | 1 cut(s) | 2653 |
| SsiI | CCGC | 4 cut(s) | 311, 1491, 1949, 2220 |
| SspI | AATATT | 3 cut(s) | 1536, 1831, 2156 |
| SspMI | CTAG | 4 cut(s) | 438, 1397, 1842, 2117 |
| SstI | GAGCTC | 1 cut(s) | 1350 |
| StyD4I | CCNGG | 4 cut(s) | 116, 382, 478, 1051 |
| StyI | CCWWGG | 5 cut(s) | 578, 1102, 1178, 1805, 2673 |
| TaaI | ACNGT | 9 cut(s) | 592, 1117, 1375, 2041, 2063, 2237, 2271, 2637, 2761 |
| TaiI | ACGT | 5 cut(s) | 563, 707, 779, 1337, 2358 |
| TaqI | TCGA | 1 cut(s) | 1500 |
| TatI | WGTACW | 2 cut(s) | 838, 1873 |
| TauI | GCSGC | 1 cut(s) | 1952 |
| TfiI | GAWTC | 3 cut(s) | 1385, 1417, 2715 |
| Tru1I | TTAA | 6 cut(s) | 131, 153, 1430, 2159, 2352, 2367 |
| Tru9I | TTAA | 6 cut(s) | 131, 153, 1430, 2159, 2352, 2367 |
| TscAI | CASTG | 6 cut(s) | 1120, 2276, 2524, 2640, 2660, 2766 |
| TseFI | GTSAC | 3 cut(s) | 777, 2120, 2458 |
| Tsp45I | GTSAC | 3 cut(s) | 777, 2120, 2458 |
| TspGWI | ACGGA | 2 cut(s) | 1731, 2577 |
| TspRI | CASTG | 6 cut(s) | 1120, 2276, 2524, 2640, 2660, 2766 |
| Tth111I | GACNNNGTC | 1 cut(s) | 797 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1789 |
| VneI | GTGCAC | 2 cut(s) | 1111, 1622 |
| VpaK11BI | GGWCC | 2 cut(s) | 1203, 1540 |
| VspI | ATTAAT | 1 cut(s) | 1430 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 121, 1210 |
| XapI | RAATTY | 9 cut(s) | 34, 158, 538, 624, 760, 1018, 1193, 1755, 2529 |
| XbaI | TCTAGA | 1 cut(s) | 437 |
| XceI | RCATGY | 3 cut(s) | 900, 1042, 2653 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 114, 2640 |
| XmiI | GTMKAC | 2 cut(s) | 1959, 2276 |
| XmnI | GAANNNNTTC | 1 cut(s) | 34 |
| XspI | CTAG | 4 cut(s) | 438, 1397, 1842, 2117 |
| Zsp2I | ATGCAT | 2 cut(s) | 466, 1040 |