RLG00000007906

Transposase family tnp2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000136
Physical Location & Seq
Forward (+)
22675269 .. 22676684
1416 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007906

Sequence Viewer

Length: 1416 bp
ATGGACAAATCATGGATAGATTTAGCAGATAGGCATTCTCCAGCATATTATGATGCAATAGATCAATTTTTGACTTTTGCATACATCAATAGGGATCTGGGTTCAAGGATTTATTGTCCTTGTAGAAAGTGTGAAAATTGTTATCTCTATGTAAGATTAGTTGTGCGGCAGAATCTTCGTGATTATGGTTTCTTTAAGAAGTATAGAAAATGGGATAAACATGGTGAGCCTAATCATTATGTTCATCCGGTGGATGGAAATCAAAATGGTATTGGGTTAGATTCTTATATGGAAGATGATATGGTCAGACTTGTCCAAGAAGCTTTCGGAGTTCCTAATGTAGGAACACATGATCGGACTAGTGAAGAAAACTCAACTAATCCTAATGTAGGGGCAAACGAACCTACCAAGAAGTTCTTGAACCTTCTTGAGGATGCAAACCTTCCATTGTATCCAGGTTCTAAGAGACACACAGCTTTGTCATATACAGTTCGTCTTTTGCAAGCGAAGGTGCTCCATGGATGGACAGATAAATCCTTCAAAACTTTACTTGAGATAGCAAAAGAATCTATGCCTGACAGTGTGCAACTTCCTAAGTCATATTATGAAGCCCAGAAGTTAACAGAAGATCTCGAATTCACTTATGAAATAGTAGATGCATGTCCTAACAGTTGTATGTTGTTTAGAAATGAAGACATAAATTTGGATGAATGCAGAATATGCAAGACATCTAGATGGAAAGATAACGATGGTAGTTCAAATGATGTTGTAGCACTTGGGAAACGAAAAGCAGCAAAACAAGCAAGATATTTTCCTTTAAAACCAAAGTTACAAAGGTTGTTTATGTCTTCAAAAACGGCAAAGCTTATGAGATGGCATGGAGAGGAAAGAACCGATGATGGTGTGTTTAGGCATCCTGCAGACTCTCTTGCATGGAAAGATTTTGACCAAAAACACACAAATTTTTCGGGAGACATTTGCAATGTAAGGCTTGGGTTAGCATCTGATGGATTCAACCCATTCAGGTCTATGAATATAGTTCATAGTACCTGGCCTATCATATTGGTTCCCTACAAGTTACCACCTATGATGTGCATGAAGCAGCCCTTTATATTTCTATCTGTTCTTATTGATGGTCCTAAGGCACCCGGTGATAAAATTGATGTCTACATGCAGCCATTCATTGAAGAATTGAAGGAATTGTATGAAGATGGTGTAGAAACATTTGATGCATTCAGCAATGAAATGTTTAAAATGCATGCTGCATTGTTGTGGACGATTAATGACTTTCCTGCCTATGCCAACTTGTCGGGGTGGAGTACAAAAGGTGAATTTGCTTGCTCATCATGCAACTCTAAAAGTGGTTACCAGCAGTTGAATTTTGGTCAAAAAGGTTCATACATGACTCATCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

472

Amino Acids

54.27

Weight (kDa)

6.68

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 3 - 76 2.9e-16 Transposase-associated domain
Transposase_21 PF02992 300 - 471 2.1e-77 Transposase family tnp2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1144
AccI GTMKAC 1 cut(s) 1167
AciI CCGC 1 cut(s) 166
AclWI GGATC 1 cut(s) 102
AcsI RAATTY 5 cut(s) 635, 700, 961, 1331, 1378
AdeI CACNNNGTG 1 cut(s) 1151
AfaI GTAC 2 cut(s) 1048, 1321
AfiI CCNNNNNNNGG 4 cut(s) 254, 341, 389, 430
AgsI TTSAA 9 cut(s) 105, 421, 541, 759, 852, 1015, 1187, 1195, 1378
AhlI ACTAGT 1 cut(s) 359
AjnI CCWGG 2 cut(s) 454, 1049
AluBI AGCT 3 cut(s) 323, 476, 865
AluI AGCT 3 cut(s) 323, 476, 865
Alw21I GWGCWC 1 cut(s) 516
Alw26I GTCTC 2 cut(s) 460, 966
AlwI GGATC 1 cut(s) 102
AoxI GGCC 1 cut(s) 1052
ApeKI GCWGC 4 cut(s) 791, 1102, 1174, 1262
ApoI RAATTY 5 cut(s) 635, 700, 961, 1331, 1378
AseI ATTAAT 1 cut(s) 1281
AspS9I GGNCC 1 cut(s) 1136
AsuC2I CCSGG 1 cut(s) 1149
AsuHPI GGTGA 3 cut(s) 236, 1163, 1340
AvaII GGWCC 1 cut(s) 1136
AxyI CCTNAGG 1 cut(s) 1140
BanI GGYRCC 1 cut(s) 1144
BbsI GAAGAC 2 cut(s) 699, 840
Bbv12I GWGCWC 1 cut(s) 516
BbvI GCAGC 4 cut(s) 803, 1114, 1186, 1249
BccI CCATC 9 cut(s) 248, 516, 729, 743, 867, 893, 1001, 1127, 1205
BceAI ACGGC 1 cut(s) 873
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 2 cut(s) 456, 1051
BciVI GTATCC 1 cut(s) 462
BcnI CCSGG 1 cut(s) 1149
BcoDI GTCTC 2 cut(s) 460, 966
BcuI ACTAGT 1 cut(s) 359
BfaI CTAG 2 cut(s) 360, 732
BfmI CTRYAG 1 cut(s) 918
BfuI GTATCC 1 cut(s) 462
BglII AGATCT 1 cut(s) 628
BisI GCNGC 5 cut(s) 167, 792, 1103, 1175, 1263
BlsI GCNGC 5 cut(s) 168, 793, 1104, 1176, 1264
Bme1390I CCNGG 3 cut(s) 456, 1051, 1149
Bme18I GGWCC 1 cut(s) 1136
BmgT120I GGNCC 1 cut(s) 1136
BmiI GGNNCC 2 cut(s) 1068, 1146
BmrFI CCNGG 3 cut(s) 456, 1051, 1149
BmsI GCATC 6 cut(s) 43, 424, 646, 922, 1010, 1219
BpiI GAAGAC 2 cut(s) 699, 840
BpmI CTGGAG 1 cut(s) 24
BpuEI CTTGAG 2 cut(s) 449, 572
BpuMI CCSGG 1 cut(s) 1149
BsaBI GATNNNNATC 1 cut(s) 258
BsaJI CCNNGG 1 cut(s) 517
BsaWI WCCGGW 1 cut(s) 247
Bsc4I CCNNNNNNNGG 4 cut(s) 254, 341, 389, 430
Bse21I CCTNAGG 1 cut(s) 1140
Bse3DI GCAATG 2 cut(s) 988, 1246
Bse8I GATNNNNATC 1 cut(s) 258
BseBI CCWGG 2 cut(s) 456, 1051
BseDI CCNNGG 1 cut(s) 517
BseGI GGATG 6 cut(s) 244, 259, 439, 527, 712, 913
BseJI GATNNNNATC 1 cut(s) 258
BseLI CCNNNNNNNGG 4 cut(s) 254, 341, 389, 430
BseMI GCAATG 2 cut(s) 988, 1246
BseXI GCAGC 4 cut(s) 803, 1114, 1186, 1249
BshFI GGCC 1 cut(s) 1054
BshNI GGYRCC 1 cut(s) 1144
BsiHKAI GWGCWC 1 cut(s) 516
BsiSI CCGG 2 cut(s) 248, 1149
BslI CCNNNNNNNGG 4 cut(s) 254, 341, 389, 430
BsmAI GTCTC 2 cut(s) 460, 966
BsmI GAATGC 3 cut(s) 34, 716, 1232
BsnI GGCC 1 cut(s) 1054
Bsp1286I GDGCHC 1 cut(s) 516
Bsp143I GATC 4 cut(s) 61, 94, 352, 628
Bsp19I CCATGG 1 cut(s) 517
BspACI CCGC 1 cut(s) 166
BspANI GGCC 1 cut(s) 1054
BspLI GGNNCC 2 cut(s) 1068, 1146
BspMAI CTGCAG 1 cut(s) 922
BspPI GGATC 1 cut(s) 102
BspT107I GGYRCC 1 cut(s) 1144
BsrDI GCAATG 2 cut(s) 988, 1246
BssECI CCNNGG 1 cut(s) 517
BssMI GATC 4 cut(s) 61, 94, 352, 628
BssT1I CCWWGG 1 cut(s) 517
Bst2UI CCWGG 2 cut(s) 456, 1051
Bst4CI ACNGT 3 cut(s) 490, 581, 671
BstAPI GCANNNNNTGC 1 cut(s) 720
BstC8I GCNNGC 3 cut(s) 504, 1260, 1339
BstDEI CTNAG 3 cut(s) 462, 594, 1140
BstDSI CCRYGG 1 cut(s) 517
BstEII GGTNACC 1 cut(s) 1364
BstENI CCTNNNNNAGG 3 cut(s) 339, 387, 428
BstF5I GGATG 6 cut(s) 244, 259, 439, 527, 712, 913
BstKTI GATC 4 cut(s) 64, 97, 355, 631
BstMAI GTCTC 2 cut(s) 460, 966
BstMBI GATC 4 cut(s) 61, 94, 352, 628
BstMWI GCNNNNNNNGC 3 cut(s) 720, 800, 1347
BstNI CCWGG 2 cut(s) 456, 1051
BstNSI RCATGY 3 cut(s) 663, 1174, 1262
BstPI GGTNACC 1 cut(s) 1364
BstSCI CCNGG 3 cut(s) 454, 1049, 1147
BstSFI CTRYAG 1 cut(s) 918
BstV1I GCAGC 4 cut(s) 803, 1114, 1186, 1249
BstV2I GAAGAC 2 cut(s) 699, 840
BstX2I RGATCY 2 cut(s) 94, 628
BstYI RGATCY 2 cut(s) 94, 628
Bsu36I CCTNAGG 1 cut(s) 1140
BsuI GTATCC 1 cut(s) 462
BsuRI GGCC 1 cut(s) 1054
BtgI CCRYGG 1 cut(s) 517
BtsCI GGATG 6 cut(s) 244, 259, 439, 527, 712, 913
BtsIMutI CAGTG 1 cut(s) 586
Cac8I GCNNGC 3 cut(s) 504, 1260, 1339
Cfr13I GGNCC 1 cut(s) 1136
Csp6I GTAC 2 cut(s) 1047, 1320
CviJI RGCY 9 cut(s) 229, 323, 476, 611, 865, 991, 1054, 1105, 1177
CviKI_1 RGCY 9 cut(s) 229, 323, 476, 611, 865, 991, 1054, 1105, 1177
CviQI GTAC 2 cut(s) 1047, 1320
DdeI CTNAG 3 cut(s) 462, 594, 1140
DpnI GATC 4 cut(s) 63, 96, 354, 630
DpnII GATC 4 cut(s) 61, 94, 352, 628
DraI TTTAAA 2 cut(s) 819, 1252
DraIII CACNNNGTG 1 cut(s) 1151
Eco130I CCWWGG 1 cut(s) 517
Eco47I GGWCC 1 cut(s) 1136
Eco81I CCTNAGG 1 cut(s) 1140
Eco91I GGTNACC 1 cut(s) 1364
EcoNI CCTNNNNNAGG 3 cut(s) 339, 387, 428
EcoO65I GGTNACC 1 cut(s) 1364
EcoRI GAATTC 1 cut(s) 635
EcoRII CCWGG 2 cut(s) 454, 1049
EcoT14I CCWWGG 1 cut(s) 517
EcoT22I ATGCAT 3 cut(s) 661, 1234, 1260
ErhI CCWWGG 1 cut(s) 517
FalI AAGNNNNNCTT 4 cut(s) 401, 433, 1091, 1123
FblI GTMKAC 1 cut(s) 1167
Fnu4HI GCNGC 5 cut(s) 167, 792, 1103, 1175, 1263
FokI GGATG 6 cut(s) 231, 266, 446, 534, 719, 900
Fsp4HI GCNGC 5 cut(s) 167, 792, 1103, 1175, 1263
FspBI CTAG 2 cut(s) 360, 732
GluI GCNGC 5 cut(s) 167, 792, 1103, 1175, 1263
GsuI CTGGAG 1 cut(s) 24
HaeIII GGCC 1 cut(s) 1054
HapII CCGG 2 cut(s) 248, 1149
HincII GTYRAC 1 cut(s) 621
HindII GTYRAC 1 cut(s) 621
HindIII AAGCTT 2 cut(s) 321, 863
HinfI GANTC 6 cut(s) 172, 281, 566, 923, 1011, 1405
HpaI GTTAAC 1 cut(s) 621
HpaII CCGG 2 cut(s) 248, 1149
HphI GGTGA 3 cut(s) 236, 1163, 1340
Hpy166II GTNNAC 3 cut(s) 621, 1168, 1275
Hpy188I TCNGA 4 cut(s) 308, 329, 357, 1006
Hpy188III TCNNGA 6 cut(s) 179, 418, 428, 632, 732, 969
Hpy8I GTNNAC 3 cut(s) 621, 1168, 1275
HpyAV CCTTC 5 cut(s) 434, 452, 502, 547, 1189
HpyCH4III ACNGT 3 cut(s) 490, 581, 671
HpyF10VI GCNNNNNNNGC 3 cut(s) 720, 800, 1347
HpyF3I CTNAG 3 cut(s) 462, 594, 1140
KspAI GTTAAC 1 cut(s) 621
Kzo9I GATC 4 cut(s) 61, 94, 352, 628
LmnI GCTCC 1 cut(s) 519
Lsp1109I GCAGC 4 cut(s) 803, 1114, 1186, 1249
LweI GCATC 6 cut(s) 43, 424, 646, 922, 1010, 1219
MaeI CTAG 2 cut(s) 360, 732
MaeIII GTNAC 3 cut(s) 828, 1077, 1364
MalI GATC 4 cut(s) 63, 96, 354, 630
MboI GATC 4 cut(s) 61, 94, 352, 628
MboII GAAGA 8 cut(s) 167, 305, 377, 638, 704, 840, 1199, 1220
MflI RGATCY 2 cut(s) 94, 628
MhlI GDGCHC 1 cut(s) 516
MlyI GAGTC 2 cut(s) 917, 1399
MnlI CCTC 2 cut(s) 424, 877
Mph1103I ATGCAT 3 cut(s) 661, 1234, 1260
MseI TTAA 5 cut(s) 195, 620, 818, 1251, 1281
MslI CAYNNNNRTG 2 cut(s) 733, 1270
MspI CCGG 2 cut(s) 248, 1149
MspR9I CCNGG 3 cut(s) 456, 1051, 1149
Mva1269I GAATGC 3 cut(s) 34, 716, 1232
MvaI CCWGG 2 cut(s) 456, 1051
MwoI GCNNNNNNNGC 3 cut(s) 720, 800, 1347
NciI CCSGG 1 cut(s) 1149
NcoI CCATGG 1 cut(s) 517
NdeII GATC 4 cut(s) 61, 94, 352, 628
NlaIV GGNNCC 2 cut(s) 1068, 1146
NsiI ATGCAT 3 cut(s) 661, 1234, 1260
NspI RCATGY 3 cut(s) 663, 1174, 1262
PaeI GCATGC 1 cut(s) 1262
PctI GAATGC 3 cut(s) 34, 716, 1232
PfeI GAWTC 4 cut(s) 172, 281, 566, 1011
PkrI GCNGC 5 cut(s) 168, 793, 1104, 1176, 1264
PleI GAGTC 2 cut(s) 917, 1399
PpsI GAGTC 2 cut(s) 917, 1399
PshBI ATTAAT 1 cut(s) 1281
Psp6I CCWGG 2 cut(s) 454, 1049
PspEI GGTNACC 1 cut(s) 1364
PspGI CCWGG 2 cut(s) 454, 1049
PspN4I GGNNCC 2 cut(s) 1068, 1146
PspPI GGNCC 1 cut(s) 1136
PstI CTGCAG 1 cut(s) 922
PsuI RGATCY 2 cut(s) 94, 628
RsaI GTAC 2 cut(s) 1048, 1321
RsaNI GTAC 2 cut(s) 1047, 1320
RseI CAYNNNNRTG 2 cut(s) 733, 1270
SaqAI TTAA 5 cut(s) 195, 620, 818, 1251, 1281
SatI GCNGC 5 cut(s) 167, 792, 1103, 1175, 1263
Sau3AI GATC 4 cut(s) 61, 94, 352, 628
Sau96I GGNCC 1 cut(s) 1136
SchI GAGTC 2 cut(s) 917, 1399
ScrFI CCNGG 3 cut(s) 456, 1051, 1149
SduI GDGCHC 1 cut(s) 516
SfaNI GCATC 6 cut(s) 43, 424, 646, 922, 1010, 1219
SfcI CTRYAG 1 cut(s) 918
SinI GGWCC 1 cut(s) 1136
SmiMI CAYNNNNRTG 2 cut(s) 733, 1270
SmlI CTYRAG 2 cut(s) 428, 551
SmoI CTYRAG 2 cut(s) 428, 551
SpeI ACTAGT 1 cut(s) 359
SphI GCATGC 1 cut(s) 1262
SsiI CCGC 1 cut(s) 166
SspMI CTAG 2 cut(s) 360, 732
StyD4I CCNGG 3 cut(s) 454, 1049, 1147
StyI CCWWGG 1 cut(s) 517
TaaI ACNGT 3 cut(s) 490, 581, 671
TaqI TCGA 1 cut(s) 633
TatI WGTACW 1 cut(s) 1319
TauI GCSGC 1 cut(s) 169
TfiI GAWTC 4 cut(s) 172, 281, 566, 1011
Tru1I TTAA 5 cut(s) 195, 620, 818, 1251, 1281
Tru9I TTAA 5 cut(s) 195, 620, 818, 1251, 1281
TscAI CASTG 1 cut(s) 586
TseI GCWGC 4 cut(s) 791, 1102, 1174, 1262
TspRI CASTG 1 cut(s) 586
VpaK11BI GGWCC 1 cut(s) 1136
VspI ATTAAT 1 cut(s) 1281
XagI CCTNNNNNAGG 3 cut(s) 339, 387, 428
XapI RAATTY 5 cut(s) 635, 700, 961, 1331, 1378
XbaI TCTAGA 1 cut(s) 731
XceI RCATGY 3 cut(s) 663, 1174, 1262
XmiI GTMKAC 1 cut(s) 1167
XspI CTAG 2 cut(s) 360, 732
Zsp2I ATGCAT 3 cut(s) 661, 1234, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.