FvH4_1g28181

Transposase family tnp2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000136
Physical Location & Seq
Reverse (-)
20018362 .. 20023187
4826 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g28181.t1

Sequence Viewer

Length: 1902 bp
ATGGGAATTAGAAAGCAGTACCATGTGAAGGAGAGGGAAGATGGTACTAAATACTTTGAGCTTGCTGATTTTGAGATGAAAAATGATGGGAAAGATAAGTTCCTCTTAGCCTTATCTCAGTCAAGAATGCCGGATGATTCTGCTTCTAATATTGCAAGGCGGGAGCATACCATTAAAAATCAATATCCTAATGTCAATGATGTTGATGTTGCGCGTATTCATGTTGATGAGTTTACAGACTGGTTTAAGGCACATGTGAGTTGCCTGCAAAATATGGGTGATGTGTCCTTATCGGAAGAAATTGTGGCTTTCTCAAATCCTCCTAGTCCTTCAGTAGCTAGGCTAAAATCATATACATCCAAAAGCCATTTTTTTCAAGTGAAAAGTGTTGACAACAAGCGAACTAGGCAAAACAGTGGTGTGTCTTTACAAGGAGATACTTTACCATATTATGGGAGATTGACAGAGATCATCAAAATTAGCTACTCTATTGATATCAAGTATGTGTTGTTTAGGTGTGAGTGGGCACATCCTTCAGCAGGAGTGAAAAAAGATCCTTTTAACTTCACTTTAGTTAACTTTAGAAGATTGTTATACCAGAATGACCGAGTTAGGGATGAACCATTCATCTTAGCATCTCAAGCACATCAGGTGACCATGTTCGGGAAGAAAAGGAAGGTTGGTAGACCACGCCACATGTCTAAATTCTTGAGTCCTAGTGGTTCTGCATCAAGCCACAATGGTTCCTCATCATCACAGTCATCCTACACATCTCTTCGTCCACCTTTGATACCGCCAACCCCACTGCCTTCTCCTCCCCAACCTACTCCTCCTTCTACATTACCTCTTCCAGCCCCAGATGCTCAGCCGCAACCTACTAACAATACTGTCAGTAGAGGTCATAATAAGAGCATTCCAGAGTGGAATACTGGAGAGAAGGTCAACATTATATTTGATTCCAAATTCCAATCTGTTGGAGAAAGAGCTACACAATTAAAGTCACAATTGGGCAAGATTGTGCGTGATGGCAGGAGGATTCCATTGACAATTATGGACTGGAAATTTGTTGATGAAAAAGTCAAAGAGAGAATTTGGAATGAGGTTAAGACAAATTTGGTTGATGTTCCAGAAGGATACAAACCTGTGTGTCACAAAAGTTGCAATTATCTTTGGAAGGATCATAAAAGCAAAACCAAATCTAACTATTTTGTACCAAACAAAAGCAATCCAGAGCTGAGTTCTATGATTCCTCCAAATATTATAGCAGATCAATGGACTGTGCTTGTTGCCTATTGGAACACTGAGGATGCAAAGGTAGAAGTGTTATGTCATTTCCATTATATTTTGCCAAATAGATGGAACAAAGTGGAGAAGAATCTGATAAATTTAGTGTGTGGAAAAAAACACGCAAAGAATCCAATCCAGAAGTTGCCCAAGTCATTGAAACTGTCACTGGTGAGACCGGTGGAAGACCAAAAGCTCACAGCTGTAAAAGACTGTGTTTTTCATGATGTTATTGGAGAGGATGGTCATGGTTATTGTCGTACCTATGGTTTTACTGTGCCTCACAATTTGGTATATCCACAAGAACCATTGGAAACTGCTGGTAACAATGACCTTATAGCCAAAATCACTGAAGAGGTAACAGAGAAACTGAAAGAGTCTTTTGATAAGAAATTGGAGGATGCTATTAAAATGCTTCAAGCTCAGATTGCCAATAATATGGATTGCACAATTGCACATGGGGGAAGAAACACAATTGCACATGGACTGGTACCAGCTGATGCAACAAGTGGCCATGAGGCTAGGAGGGAGTCCATAGGAGAGGGAGATCCTGAGGTCACTACCCATTTTGATTCAACTTCTGATGATGTCACTGGTCACCATGATCCCCCTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

634

Amino Acids

71.56

Weight (kDa)

8.82

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4216 PF13952 158 - 218 7.7e-14 Domain of unknown function (DUF4216)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1774
AccB1I GGYRCC 1 cut(s) 1774
AccB7I CCANNNNNTGG 1 cut(s) 452
AccI GTMKAC 1 cut(s) 685
AccII CGCG 1 cut(s) 214
AciI CCGC 3 cut(s) 160, 794, 869
AclWI GGATC 4 cut(s) 548, 1185, 1826, 1883
AcoI YGGCCR 1 cut(s) 1795
AcsI RAATTY 6 cut(s) 704, 962, 1061, 1089, 1111, 1384
AcuI CTGAAG 3 cut(s) 315, 519, 1656
AfaI GTAC 5 cut(s) 20, 46, 1212, 1546, 1776
AfiI CCNNNNNNNGG 5 cut(s) 28, 452, 539, 613, 663
AflIII ACRYGT 2 cut(s) 253, 696
AgeI ACCGGT 1 cut(s) 1462
AgsI TTSAA 4 cut(s) 377, 1444, 1703, 1860
AluBI AGCT 9 cut(s) 61, 338, 483, 986, 1234, 1480, 1487, 1706, 1781
AluI AGCT 9 cut(s) 61, 338, 483, 986, 1234, 1480, 1487, 1706, 1781
Alw26I GTCTC 1 cut(s) 1453
AlwI GGATC 4 cut(s) 548, 1185, 1826, 1883
AoxI GGCC 1 cut(s) 1795
ApoI RAATTY 6 cut(s) 704, 962, 1061, 1089, 1111, 1384
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
AsiGI ACCGGT 1 cut(s) 1462
Asp718I GGTACC 1 cut(s) 1774
AspLEI GCGC 1 cut(s) 214
AsuHPI GGTGA 4 cut(s) 290, 664, 1468, 1874
AxyI CCTNAGG 1 cut(s) 1836
BaeGI GKGCMC 1 cut(s) 529
BalI TGGCCA 1 cut(s) 1797
BanI GGYRCC 1 cut(s) 1774
BbsI GAAGAC 1 cut(s) 1476
BccI CCATC 5 cut(s) 35, 80, 1019, 1350, 1520
BciVI GTATCC 1 cut(s) 1127
BcoDI GTCTC 1 cut(s) 1453
BfaI CTAG 5 cut(s) 324, 339, 405, 717, 1806
BfuI GTATCC 1 cut(s) 1127
BisI GCNGC 1 cut(s) 869
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 1 cut(s) 870
BmiI GGNNCC 2 cut(s) 745, 1776
BmsI GCATC 6 cut(s) 644, 737, 850, 1297, 1675, 1774
BpiI GAAGAC 1 cut(s) 1476
BpmI CTGGAG 1 cut(s) 951
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 2 cut(s) 624, 730
BsaI GGTCTC 1 cut(s) 1453
BsaWI WCCGGW 1 cut(s) 1462
BsaXI ACNNNNNCTCC 2 cut(s) 924, 954
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 452, 539, 613, 663
Bse118I RCCGGY 1 cut(s) 1462
Bse1I ACTGG 6 cut(s) 245, 934, 1061, 1458, 1776, 1882
Bse21I CCTNAGG 1 cut(s) 1836
BseGI GGATG 8 cut(s) 139, 356, 529, 622, 761, 1312, 1531, 1690
BseLI CCNNNNNNNGG 5 cut(s) 28, 452, 539, 613, 663
BseMII CTCAG 6 cut(s) 131, 878, 1226, 1293, 1721, 1827
BseNI ACTGG 6 cut(s) 245, 934, 1061, 1458, 1776, 1882
BseRI GAGGAG 2 cut(s) 804, 819
BseSI GKGCMC 1 cut(s) 529
Bsh1236I CGCG 1 cut(s) 214
BshFI GGCC 1 cut(s) 1797
BshNI GGYRCC 1 cut(s) 1774
BshTI ACCGGT 1 cut(s) 1462
BsiSI CCGG 2 cut(s) 131, 1463
BslI CCNNNNNNNGG 5 cut(s) 28, 452, 539, 613, 663
BsmAI GTCTC 1 cut(s) 1453
BsmI GAATGC 2 cut(s) 132, 912
BsnI GGCC 1 cut(s) 1797
Bso31I GGTCTC 1 cut(s) 1453
Bsp1286I GDGCHC 1 cut(s) 529
Bsp143I GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
Bsp1720I GCTNAGC 1 cut(s) 864
BspACI CCGC 3 cut(s) 160, 794, 869
BspANI GGCC 1 cut(s) 1797
BspCNI CTCAG 6 cut(s) 130, 877, 1227, 1294, 1720, 1828
BspFNI CGCG 1 cut(s) 214
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 2 cut(s) 745, 1776
BspPI GGATC 4 cut(s) 548, 1185, 1826, 1883
BspT107I GGYRCC 1 cut(s) 1774
BspTNI GGTCTC 1 cut(s) 1453
BsrFI RCCGGY 1 cut(s) 1462
BsrI ACTGG 6 cut(s) 245, 934, 1061, 1458, 1776, 1882
BssAI RCCGGY 1 cut(s) 1462
BssMI GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
Bst4CI ACNGT 7 cut(s) 416, 759, 889, 1279, 1449, 1499, 1561
Bst6I CTCTTC 3 cut(s) 780, 852, 1632
BstC8I GCNNGC 2 cut(s) 63, 266
BstDEI CTNAG 8 cut(s) 106, 117, 631, 864, 1235, 1302, 1707, 1836
BstEII GGTNACC 2 cut(s) 652, 1880
BstENI CCTNNNNNAGG 1 cut(s) 537
BstF5I GGATG 8 cut(s) 139, 356, 529, 622, 761, 1312, 1531, 1690
BstFNI CGCG 1 cut(s) 214
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 6 cut(s) 471, 556, 1180, 1270, 1834, 1891
BstMAI GTCTC 1 cut(s) 1453
BstMBI GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
BstMWI GCNNNNNNNGC 4 cut(s) 406, 641, 860, 1712
BstNSI RCATGY 2 cut(s) 257, 700
BstPI GGTNACC 2 cut(s) 652, 1880
BstSLI GKGCMC 1 cut(s) 529
BstUI CGCG 1 cut(s) 214
BstV2I GAAGAC 1 cut(s) 1476
BstX2I RGATCY 2 cut(s) 553, 1831
BstXI CCANNNNNNTGG 3 cut(s) 974, 1356, 1723
BstYI RGATCY 2 cut(s) 553, 1831
Bsu36I CCTNAGG 1 cut(s) 1836
BsuI GTATCC 1 cut(s) 1127
BsuRI GGCC 1 cut(s) 1797
BtsCI GGATG 8 cut(s) 139, 356, 529, 622, 761, 1312, 1531, 1690
BtsI GCAGTG 1 cut(s) 803
BtsIMutI CAGTG 6 cut(s) 421, 803, 1299, 1451, 1632, 1875
Cac8I GCNNGC 2 cut(s) 63, 266
CciI TCATGA 1 cut(s) 1507
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 1462
Csp6I GTAC 5 cut(s) 19, 45, 1211, 1545, 1775
CspAI ACCGGT 1 cut(s) 1462
CviQI GTAC 5 cut(s) 19, 45, 1211, 1545, 1775
DdeI CTNAG 8 cut(s) 106, 117, 631, 864, 1235, 1302, 1707, 1836
DpnI GATC 6 cut(s) 470, 555, 1179, 1269, 1833, 1890
DpnII GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
EaeI YGGCCR 1 cut(s) 1795
Eam1104I CTCTTC 3 cut(s) 780, 852, 1632
EarI CTCTTC 3 cut(s) 780, 852, 1632
Eco31I GGTCTC 1 cut(s) 1453
Eco32I GATATC 1 cut(s) 496
Eco57I CTGAAG 3 cut(s) 315, 519, 1656
Eco81I CCTNAGG 1 cut(s) 1836
Eco91I GGTNACC 2 cut(s) 652, 1880
EcoNI CCTNNNNNAGG 1 cut(s) 537
EcoO65I GGTNACC 2 cut(s) 652, 1880
EcoRV GATATC 1 cut(s) 496
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FauI CCCGC 1 cut(s) 153
FblI GTMKAC 1 cut(s) 685
Fnu4HI GCNGC 1 cut(s) 869
FokI GGATG 8 cut(s) 146, 343, 516, 629, 748, 1319, 1538, 1697
Fsp4HI GCNGC 1 cut(s) 869
FspBI CTAG 5 cut(s) 324, 339, 405, 717, 1806
GlaI GCGC 1 cut(s) 213
GluI GCNGC 1 cut(s) 869
GsuI CTGGAG 1 cut(s) 951
HaeIII GGCC 1 cut(s) 1797
HapII CCGG 2 cut(s) 131, 1463
HhaI GCGC 1 cut(s) 214
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HincII GTYRAC 3 cut(s) 391, 577, 943
HindII GTYRAC 3 cut(s) 391, 577, 943
HpaI GTTAAC 1 cut(s) 577
HpaII CCGG 2 cut(s) 131, 1463
HphI GGTGA 4 cut(s) 290, 664, 1468, 1874
Hpy166II GTNNAC 6 cut(s) 234, 391, 577, 686, 782, 943
Hpy188I TCNGA 4 cut(s) 295, 1380, 1710, 1867
Hpy188III TCNNGA 9 cut(s) 123, 664, 709, 917, 1127, 1229, 1423, 1508, 1835
Hpy8I GTNNAC 6 cut(s) 234, 391, 577, 686, 782, 943
HpyAV CCTTC 9 cut(s) 22, 339, 543, 670, 819, 843, 931, 1124, 1168
HpyCH4III ACNGT 7 cut(s) 416, 759, 889, 1279, 1449, 1499, 1561
HpyF10VI GCNNNNNNNGC 4 cut(s) 406, 641, 860, 1712
HpyF3I CTNAG 8 cut(s) 106, 117, 631, 864, 1235, 1302, 1707, 1836
HspAI GCGC 1 cut(s) 212
KpnI GGTACC 1 cut(s) 1778
KspAI GTTAAC 1 cut(s) 577
Kzo9I GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
LmnI GCTCC 1 cut(s) 163
LweI GCATC 6 cut(s) 644, 737, 850, 1297, 1675, 1774
MaeI CTAG 5 cut(s) 324, 339, 405, 717, 1806
MaeIII GTNAC 9 cut(s) 652, 999, 1148, 1449, 1607, 1642, 1840, 1873, 1880
MalI GATC 6 cut(s) 470, 555, 1179, 1269, 1833, 1890
MboI GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
MfeI CAATTG 3 cut(s) 1004, 1734, 1758
MflI RGATCY 2 cut(s) 553, 1831
MhlI GDGCHC 1 cut(s) 529
MlsI TGGCCA 1 cut(s) 1797
MluNI TGGCCA 1 cut(s) 1797
MlyI GAGTC 3 cut(s) 721, 1670, 1823
MmeI TCCRAC 1 cut(s) 955
Mox20I TGGCCA 1 cut(s) 1797
MscI TGGCCA 1 cut(s) 1797
MseI TTAA 7 cut(s) 174, 246, 561, 576, 995, 1104, 1692
MslI CAYNNNNRTG 1 cut(s) 225
Msp20I TGGCCA 1 cut(s) 1797
MspA1I CMGCKG 2 cut(s) 1487, 1781
MspI CCGG 2 cut(s) 131, 1463
MunI CAATTG 3 cut(s) 1004, 1734, 1758
Mva1269I GAATGC 2 cut(s) 132, 912
MvnI CGCG 1 cut(s) 214
MwoI GCNNNNNNNGC 4 cut(s) 406, 641, 860, 1712
NdeII GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
NlaIV GGNNCC 2 cut(s) 745, 1776
NmuCI GTSAC 7 cut(s) 652, 999, 1148, 1449, 1840, 1873, 1880
NspI RCATGY 2 cut(s) 257, 700
PagI TCATGA 1 cut(s) 1507
PciI ACATGT 2 cut(s) 253, 696
PctI GAATGC 2 cut(s) 132, 912
PfeI GAWTC 7 cut(s) 137, 956, 1036, 1246, 1375, 1414, 1856
PflMI CCANNNNNTGG 1 cut(s) 452
PinAI ACCGGT 1 cut(s) 1462
PkrI GCNGC 1 cut(s) 870
PleI GAGTC 3 cut(s) 720, 1669, 1822
PpsI GAGTC 3 cut(s) 720, 1669, 1822
PscI ACATGT 2 cut(s) 253, 696
PspEI GGTNACC 2 cut(s) 652, 1880
PspN4I GGNNCC 2 cut(s) 745, 1776
PsuI RGATCY 2 cut(s) 553, 1831
PvuII CAGCTG 2 cut(s) 1487, 1781
RsaI GTAC 5 cut(s) 20, 46, 1212, 1546, 1776
RsaNI GTAC 5 cut(s) 19, 45, 1211, 1545, 1775
RseI CAYNNNNRTG 1 cut(s) 225
SaqAI TTAA 7 cut(s) 174, 246, 561, 576, 995, 1104, 1692
SatI GCNGC 1 cut(s) 869
Sau3AI GATC 6 cut(s) 468, 553, 1177, 1267, 1831, 1888
SchI GAGTC 3 cut(s) 721, 1670, 1823
SduI GDGCHC 1 cut(s) 529
SfaNI GCATC 6 cut(s) 644, 737, 850, 1297, 1675, 1774
SmiMI CAYNNNNRTG 1 cut(s) 225
SmlI CTYRAG 2 cut(s) 639, 709
SmoI CTYRAG 2 cut(s) 639, 709
SsiI CCGC 3 cut(s) 160, 794, 869
SspI AATATT 2 cut(s) 151, 1258
SspMI CTAG 5 cut(s) 324, 339, 405, 717, 1806
TaaI ACNGT 7 cut(s) 416, 759, 889, 1279, 1449, 1499, 1561
TaqII GACCGA 1 cut(s) 621
TauI GCSGC 1 cut(s) 871
TfiI GAWTC 7 cut(s) 137, 956, 1036, 1246, 1375, 1414, 1856
Tru1I TTAA 7 cut(s) 174, 246, 561, 576, 995, 1104, 1692
Tru9I TTAA 7 cut(s) 174, 246, 561, 576, 995, 1104, 1692
TscAI CASTG 6 cut(s) 421, 810, 1306, 1458, 1639, 1882
TseFI GTSAC 7 cut(s) 652, 999, 1148, 1449, 1840, 1873, 1880
Tsp45I GTSAC 7 cut(s) 652, 999, 1148, 1449, 1840, 1873, 1880
TspDTI ATGAA 6 cut(s) 92, 209, 616, 633, 1086, 1496
TspRI CASTG 6 cut(s) 421, 810, 1306, 1458, 1639, 1882
Van91I CCANNNNNTGG 1 cut(s) 452
XagI CCTNNNNNAGG 1 cut(s) 537
XapI RAATTY 6 cut(s) 704, 962, 1061, 1089, 1111, 1384
XceI RCATGY 2 cut(s) 257, 700
XmiI GTMKAC 1 cut(s) 685
XspI CTAG 5 cut(s) 324, 339, 405, 717, 1806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.