FvH4_4g09832

Transposase family tnp2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000136
Physical Location & Seq
Forward (+)
12049199 .. 12052951
3753 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g09832.t1

Sequence Viewer

Length: 1536 bp
ATGGGAATTAGAAAGCAGTATCATGTGAAGGAGAGGGAAGATGGTACTAAATACTTTGAGCCTGCTGATTTTGAGATGAAAAATGATGGGAAAGATAAGTTCCTCTTAGCCTTATCTCAGTCAAGAATGCCGGATGGTTCTGCTTCTAATATTGCAAGGGAGCATATGTCTACCATTAAAAATCAATATCCTAATGCCAATGATGTTGATGTTGCACGTATTCATTTTGATGAGTTTGCAGACTGGTTTAAGGCACATGTGAGTTGTTTGCAAAATATGGGTGATGTGTCCTTACCGGAAGAAATTATGGCTTTGTCAAATCCTCCTTGTCCTTCAGCAGCTAGGCTGAAATCATATACATCCAAAGGCCATTTTTTTCGAGTGAAAAGTGTTGACAACAAGCGAACTAGGCAACACAGTGGTGTGTCTTTACAAGGAGATACTTTACCATATTATGGGAGATTGACAGAGATCATCAAAATTAGCTACTCTATTGATATCAAGTATGTGTTGTTTAGGTGTGAGTGGGCACATCCTTCAACAGGAGTGAAAAAAGATCCTTTTAACTTCACTTTAGTTAACTTTAGAAGATTGTTATACCAGAATGACCGGGTTAGGGATGAACCATTCATCTTAGCATCTCAAGCACATCAGGTGTGGTATATCCCAGATCCTTCAGGAGAAGGTTGGCTAAATGTCAGCGAAGTGGAGTCTAAGGACTTCTCTCATGTGCAATTTGACACGAGTGATGAAATGGAGTCGGTGGTGACCATGTTGGGGAAGAAAAGGAAGGTTGGTAGACCATGCCACATGTCTGAATTCTTGAGTCCTAGCGGTTCTACATCAAGCCACAATGGTTCCTCATCATCACAGTCATCCTACACGTCTATTCGTCCACCTTTGATACCGCCAACCCCACTGCCTTCTCCTCCCCAACCTACTCCTCCCTCTACATTACCTCTTCCAGCCCCAGATGCTCAGCCACAACCTACTAGCAATACTGTCAGTAGAGGTCATAACAAGGGCATTCCAGAGTGGAATACTAGAGAGAATGTCAACATTATGTTTGATTCTAAATTCCAACCTGTTGGAGAAAGAGCTACACAATTGAAGTCACAATTGGGCAAGATTGTGCGTGATGGCAGGAGGATTCCATTGACAATTATGGACTGGAAATCTGTTGATGAAAAAGTCAAAGAGGGAATTTGGAATGAGGTTAAGACAAATTTGGTTGATGTTCCAGAAGGATACAAACCTGTGTGTCTCAAAAGTTGCAATTATCTTTGGAAGGATCATAAAAGCAAAACCAAATCTAACTACTTTGTACCAAACAAAAGCAATCCAAAGCTGAGTTCTATGGTTCCTCCAAATATTATAGCAGATCAATGGACTATGCTTGTTGCCTATTGGAACACTGAGGATACAAAGGCAATAGTGACTCGTAATTCAATCAATCGAGAGACACGTGGACCATCTCATAATACTGGTAGAAAGAATTTTGCTCAATTAAGATCTGAGATGGAACAAAGTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

512

Amino Acids

57.97

Weight (kDa)

9.08

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4216 PF13952 159 - 231 5.8e-19 Domain of unknown function (DUF4216)
Transposase_24 PF03004 461 - 509 2.1e-10 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 455
AccI GTMKAC 2 cut(s) 170, 799
AciI CCGC 2 cut(s) 834, 908
AclWI GGATC 3 cut(s) 551, 665, 1299
AcsI RAATTY 5 cut(s) 818, 1076, 1203, 1225, 1495
AcuI CTGAAG 2 cut(s) 318, 660
AcvI CACGTG 1 cut(s) 1466
AfaI GTAC 2 cut(s) 46, 1326
AfiI CCNNNNNNNGG 4 cut(s) 455, 542, 616, 777
AflIII ACRYGT 4 cut(s) 256, 810, 882, 1463
AgsI TTSAA 3 cut(s) 540, 1111, 1449
AjiI CACGTC 1 cut(s) 885
AjuI GAANNNNNNNTTGG 4 cut(s) 1103, 1135, 1336, 1368
AleI CACNNNNGTG 1 cut(s) 420
AluBI AGCT 4 cut(s) 341, 486, 1100, 1348
AluI AGCT 4 cut(s) 341, 486, 1100, 1348
Alw26I GTCTC 2 cut(s) 1268, 1454
AlwI GGATC 3 cut(s) 551, 665, 1299
AoxI GGCC 1 cut(s) 367
ApeKI GCWGC 1 cut(s) 338
ApoI RAATTY 5 cut(s) 818, 1076, 1203, 1225, 1495
AspS9I GGNCC 1 cut(s) 1469
AsuC2I CCSGG 1 cut(s) 611
AsuHPI GGTGA 2 cut(s) 293, 778
AvaII GGWCC 1 cut(s) 1469
BaeGI GKGCMC 1 cut(s) 532
BauI CACGAG 1 cut(s) 742
BbrPI CACGTG 1 cut(s) 1466
BbvI GCAGC 1 cut(s) 350
BccI CCATC 6 cut(s) 35, 80, 128, 1133, 1480, 1513
BciVI GTATCC 2 cut(s) 1241, 1414
BcnI CCSGG 1 cut(s) 611
BcoDI GTCTC 2 cut(s) 1268, 1454
BfaI CTAG 5 cut(s) 342, 408, 831, 993, 1044
BfuI GTATCC 2 cut(s) 1241, 1414
BglII AGATCT 1 cut(s) 1511
BisI GCNGC 1 cut(s) 339
BlpI GCTNAGC 1 cut(s) 978
BlsI GCNGC 1 cut(s) 340
Bme1390I CCNGG 1 cut(s) 611
Bme18I GGWCC 1 cut(s) 1469
BmgBI CACGTC 1 cut(s) 885
BmgT120I GGNCC 1 cut(s) 1469
BmiI GGNNCC 2 cut(s) 859, 1362
BmrFI CCNGG 1 cut(s) 611
BmsI GCATC 2 cut(s) 647, 964
Bpu1102I GCTNAGC 1 cut(s) 978
BpuEI CTTGAG 2 cut(s) 627, 844
BpuMI CCSGG 1 cut(s) 611
BsaAI YACGTR 2 cut(s) 218, 1466
BsaWI WCCGGW 1 cut(s) 295
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 4 cut(s) 455, 542, 616, 777
Bse1I ACTGG 3 cut(s) 248, 1175, 1489
BseGI GGATG 5 cut(s) 139, 359, 532, 625, 875
BseLI CCNNNNNNNGG 4 cut(s) 455, 542, 616, 777
BseMII CTCAG 5 cut(s) 131, 992, 1340, 1407, 1506
BseNI ACTGG 3 cut(s) 248, 1175, 1489
BseRI GAGGAG 2 cut(s) 918, 933
BseSI GKGCMC 1 cut(s) 532
BseXI GCAGC 1 cut(s) 350
BshFI GGCC 1 cut(s) 369
BsiSI CCGG 3 cut(s) 131, 296, 610
BslI CCNNNNNNNGG 4 cut(s) 455, 542, 616, 777
BsmAI GTCTC 2 cut(s) 1268, 1454
BsmI GAATGC 2 cut(s) 132, 1026
BsnI GGCC 1 cut(s) 369
Bsp1286I GDGCHC 1 cut(s) 532
Bsp143I GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
Bsp1720I GCTNAGC 1 cut(s) 978
BspACI CCGC 2 cut(s) 834, 908
BspANI GGCC 1 cut(s) 369
BspCNI CTCAG 5 cut(s) 130, 991, 1341, 1408, 1507
BspLI GGNNCC 2 cut(s) 859, 1362
BspPI GGATC 3 cut(s) 551, 665, 1299
BsrI ACTGG 3 cut(s) 248, 1175, 1489
BssMI GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
BssSI CACGAG 1 cut(s) 742
Bst2BI CACGAG 1 cut(s) 742
Bst4CI ACNGT 3 cut(s) 419, 873, 1003
Bst6I CTCTTC 1 cut(s) 966
BstBAI YACGTR 2 cut(s) 218, 1466
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 8 cut(s) 106, 117, 634, 714, 978, 1349, 1416, 1515
BstEII GGTNACC 1 cut(s) 766
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 5 cut(s) 139, 359, 532, 625, 875
BstKTI GATC 6 cut(s) 474, 559, 673, 1294, 1384, 1514
BstMAI GTCTC 2 cut(s) 1268, 1454
BstMBI GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
BstMWI GCNNNNNNNGC 3 cut(s) 409, 644, 974
BstNSI RCATGY 2 cut(s) 260, 814
BstPI GGTNACC 1 cut(s) 766
BstSCI CCNGG 1 cut(s) 609
BstSLI GKGCMC 1 cut(s) 532
BstV1I GCAGC 1 cut(s) 350
BstX2I RGATCY 3 cut(s) 556, 670, 1511
BstXI CCANNNNNNTGG 1 cut(s) 1088
BstYI RGATCY 3 cut(s) 556, 670, 1511
BsuI GTATCC 2 cut(s) 1241, 1414
BsuRI GGCC 1 cut(s) 369
BtrI CACGTC 1 cut(s) 885
BtsCI GGATG 5 cut(s) 139, 359, 532, 625, 875
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 3 cut(s) 424, 917, 1413
Cac8I GCNNGC 1 cut(s) 63
Cfr13I GGNCC 1 cut(s) 1469
Csp6I GTAC 2 cut(s) 45, 1325
CviAII CATG 6 cut(s) 23, 257, 728, 772, 804, 811
CviQI GTAC 2 cut(s) 45, 1325
DdeI CTNAG 8 cut(s) 106, 117, 634, 714, 978, 1349, 1416, 1515
DpnI GATC 6 cut(s) 473, 558, 672, 1293, 1383, 1513
DpnII GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
Eam1104I CTCTTC 1 cut(s) 966
EarI CTCTTC 1 cut(s) 966
Eco32I GATATC 1 cut(s) 499
Eco47I GGWCC 1 cut(s) 1469
Eco57I CTGAAG 2 cut(s) 318, 660
Eco72I CACGTG 1 cut(s) 1466
Eco91I GGTNACC 1 cut(s) 766
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoO65I GGTNACC 1 cut(s) 766
EcoRI GAATTC 1 cut(s) 818
EcoRV GATATC 1 cut(s) 499
FaeI CATG 6 cut(s) 26, 260, 731, 775, 807, 814
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FatI CATG 6 cut(s) 22, 256, 727, 771, 803, 810
FauNDI CATATG 1 cut(s) 165
FblI GTMKAC 2 cut(s) 170, 799
Fnu4HI GCNGC 1 cut(s) 339
FokI GGATG 5 cut(s) 146, 346, 519, 632, 862
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 5 cut(s) 342, 408, 831, 993, 1044
GluI GCNGC 1 cut(s) 339
HaeIII GGCC 1 cut(s) 369
HapII CCGG 3 cut(s) 131, 296, 610
Hin1II CATG 6 cut(s) 26, 260, 731, 775, 807, 814
HincII GTYRAC 3 cut(s) 394, 580, 1057
HindII GTYRAC 3 cut(s) 394, 580, 1057
HinfI GANTC 6 cut(s) 710, 758, 826, 1070, 1150, 1438
HpaI GTTAAC 1 cut(s) 580
HpaII CCGG 3 cut(s) 131, 296, 610
HphI GGTGA 2 cut(s) 293, 778
Hpy166II GTNNAC 7 cut(s) 171, 394, 580, 800, 896, 1057, 1469
Hpy188I TCNGA 2 cut(s) 817, 1516
Hpy188III TCNNGA 6 cut(s) 123, 678, 823, 1031, 1241, 1457
Hpy8I GTNNAC 7 cut(s) 171, 394, 580, 800, 896, 1057, 1469
HpyAV CCTTC 9 cut(s) 22, 342, 546, 677, 684, 784, 933, 1238, 1282
HpyCH4III ACNGT 3 cut(s) 419, 873, 1003
HpyCH4IV ACGT 3 cut(s) 217, 884, 1465
HpyCH4V TGCA 6 cut(s) 155, 215, 239, 271, 733, 1275
HpyF10VI GCNNNNNNNGC 3 cut(s) 409, 644, 974
HpyF3I CTNAG 8 cut(s) 106, 117, 634, 714, 978, 1349, 1416, 1515
HpySE526I ACGT 3 cut(s) 217, 884, 1465
Hsp92II CATG 6 cut(s) 26, 260, 731, 775, 807, 814
KspAI GTTAAC 1 cut(s) 580
Kzo9I GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 2 cut(s) 647, 964
MaeI CTAG 5 cut(s) 342, 408, 831, 993, 1044
MaeII ACGT 3 cut(s) 217, 884, 1465
MaeIII GTNAC 3 cut(s) 766, 1113, 1435
MalI GATC 6 cut(s) 473, 558, 672, 1293, 1383, 1513
MboI GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
MboII GAAGA 5 cut(s) 50, 311, 600, 793, 953
MfeI CAATTG 2 cut(s) 1106, 1118
MflI RGATCY 3 cut(s) 556, 670, 1511
MhlI GDGCHC 1 cut(s) 532
MlyI GAGTC 4 cut(s) 719, 767, 835, 1432
MmeI TCCRAC 2 cut(s) 1069, 1105
MseI TTAA 6 cut(s) 177, 249, 564, 579, 1218, 1508
MslI CAYNNNNRTG 2 cut(s) 228, 420
MspI CCGG 3 cut(s) 131, 296, 610
MspR9I CCNGG 1 cut(s) 611
MunI CAATTG 2 cut(s) 1106, 1118
Mva1269I GAATGC 2 cut(s) 132, 1026
MwoI GCNNNNNNNGC 3 cut(s) 409, 644, 974
NciI CCSGG 1 cut(s) 611
NdeI CATATG 1 cut(s) 165
NdeII GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
NlaIII CATG 6 cut(s) 26, 260, 731, 775, 807, 814
NlaIV GGNNCC 2 cut(s) 859, 1362
NmuCI GTSAC 3 cut(s) 766, 1113, 1435
NspI RCATGY 2 cut(s) 260, 814
OliI CACNNNNGTG 1 cut(s) 420
PciI ACATGT 2 cut(s) 256, 810
PcsI WCGNNNNNNNCGW 1 cut(s) 1462
PctI GAATGC 2 cut(s) 132, 1026
PfeI GAWTC 2 cut(s) 1070, 1150
PflMI CCANNNNNTGG 1 cut(s) 455
PkrI GCNGC 1 cut(s) 340
PleI GAGTC 4 cut(s) 718, 766, 834, 1432
PmaCI CACGTG 1 cut(s) 1466
PmlI CACGTG 1 cut(s) 1466
PpsI GAGTC 4 cut(s) 718, 766, 834, 1432
Ppu21I YACGTR 2 cut(s) 218, 1466
PscI ACATGT 2 cut(s) 256, 810
PspCI CACGTG 1 cut(s) 1466
PspEI GGTNACC 1 cut(s) 766
PspN4I GGNNCC 2 cut(s) 859, 1362
PspPI GGNCC 1 cut(s) 1469
PsuI RGATCY 3 cut(s) 556, 670, 1511
RsaI GTAC 2 cut(s) 46, 1326
RsaNI GTAC 2 cut(s) 45, 1325
RseI CAYNNNNRTG 2 cut(s) 228, 420
SaqAI TTAA 6 cut(s) 177, 249, 564, 579, 1218, 1508
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 6 cut(s) 471, 556, 670, 1291, 1381, 1511
Sau96I GGNCC 1 cut(s) 1469
SchI GAGTC 4 cut(s) 719, 767, 835, 1432
ScrFI CCNGG 1 cut(s) 611
SduI GDGCHC 1 cut(s) 532
SfaNI GCATC 2 cut(s) 647, 964
SinI GGWCC 1 cut(s) 1469
SmiMI CAYNNNNRTG 2 cut(s) 228, 420
SmlI CTYRAG 2 cut(s) 642, 823
SmoI CTYRAG 2 cut(s) 642, 823
SsiI CCGC 2 cut(s) 834, 908
SspI AATATT 2 cut(s) 151, 1372
SspMI CTAG 5 cut(s) 342, 408, 831, 993, 1044
StyD4I CCNGG 1 cut(s) 609
TaaI ACNGT 3 cut(s) 419, 873, 1003
TaiI ACGT 3 cut(s) 220, 887, 1468
TaqI TCGA 2 cut(s) 379, 1456
TfiI GAWTC 2 cut(s) 1070, 1150
Tru1I TTAA 6 cut(s) 177, 249, 564, 579, 1218, 1508
Tru9I TTAA 6 cut(s) 177, 249, 564, 579, 1218, 1508
TscAI CASTG 3 cut(s) 424, 924, 1420
TseFI GTSAC 3 cut(s) 766, 1113, 1435
TseI GCWGC 1 cut(s) 338
Tsp45I GTSAC 3 cut(s) 766, 1113, 1435
TspDTI ATGAA 6 cut(s) 92, 212, 619, 636, 765, 1200
TspRI CASTG 3 cut(s) 424, 924, 1420
Van91I CCANNNNNTGG 1 cut(s) 455
VpaK11BI GGWCC 1 cut(s) 1469
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 5 cut(s) 818, 1076, 1203, 1225, 1495
XceI RCATGY 2 cut(s) 260, 814
XmiI GTMKAC 2 cut(s) 170, 799
XspI CTAG 5 cut(s) 342, 408, 831, 993, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.