RLG00000009863

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000136
Physical Location & Seq
Forward (+)
59101853 .. 59108067
6215 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009863

Sequence Viewer

Length: 1638 bp
ATGGATAAGAGTTGGATTGATATACGGGAAACGGACTGGCATAAATATGAAGATGGAGTTGATAGTTTTTTGGAGTTCGCATTTGCCAACAGCGTCGATCCAACAAGGATAAAGTGTCCTTGTAAGCTATGTCGGAATCGCTATTTTAAGTCTAGGGAGGAAGCAAGAGAGGATATACTGGTAGATGGATTTTGGGAAACGTATAGAATATGGGATAAACATGGTGAACCTTCCGGACCTGCAGCTGCATACCAAGGTAGTGGGGTTAACTCTGATTCGATCATCATGGATGATATGTTTGGCATGATTAATGAGGCGATTGGGATTCCCACTGCAAATCCTGGTTTAGGTGATGATTTTCCGTATAAACGACCTCGATCTAATACTACTGGAAATCAACAAGAAGCTCAATTGGTGACACCTACAGCTGCTCAATCAGAGACATCGCAGCATCATGTGTCTAAAACTAGTCAGAAGGAGCCTGTTACAACTCAATTACATGATTCAGGTCAAGTTACTGAAACAGCTAAGAAAGGTAGAGGTGCTGCTTGTGGTATGCCTGAGTGGGGAATTGGAAAACTAATTCATATTGAGTTTGATGCTAACTGGATGCCTATTAGTGAAAATGGGAAGGGATTTAGTTCACAACTTGGAATTTTGGCGCGAGATGGAGAGAAGGTTCCTCTAACATATACTTCATGGAATGCCATGCCAGACGATATTTTGGATGCCATTTGGAAAGATGTCAAGGATAATACGGATGTTCCGGATGAGTATAAACAACATTGCTTAAAGGTTGTTGGTAGTAGATGGAGGGACTGGAAGTGTCGAGTCAAGACAAAATGGTATGATAAGTATGAAACGGATGAGCAGCGATTAACATTCATTCCTAATCAGGTTGTTGGAGAGCAATGGAAGATATTAGTAAAGTATTGGGGTCTTCCGCAAATAAAGGAAATGTGTGAGACAAATAAATCTAGCCATGCACAAGGAGGAGGTGTCCCTCATAGGACTGGTCGAAAATCTTTTGCTAGACTACGAAAAGAGATGATGGAGAATGGAGAGAAAACATATCGTGTCAGCATATTTGTCAAAACAAGAGCAATGAAAACAAAGGATGATGATGGTCAACCAATTGAAATTCATGATGAGGAGGCTATTGCTGTTATTAGTCAATTCAATGAATATTTGGAGGAGAGGCCAGAAGATGAACAAGATGATACTTTTCGTGAAGAGGTATTCACTAAAGTGATGGGAGAAGATGCACATGGACGTGTTCGCATGTATGGAACAGGTGTAACTCCATCTCAAACTAATGAGAAAAGGACAATTGAGGAAATGGAAAGAAAAAACGAGGAAATGGAAAAAAACTATCAGACAAAGCTAGATGATCTTAAATTGAGCCATGAATCTCAATTGGGAGACATGAAATTAAAGTACGATGATGTATCAAATCGTCTCAATCATTTGATGGCTCATGTTGGTATCCAAGAAAACCCAAGTGGAAGTACAAGTGAACAGATTCATGATTCCTCAAGTCCACAACAACTTAGGCGTAATATAGGTACTGATGAACATCGTCAATTGGATTTGGAAGGGCAGCGACAATTATCTTCGTCTACAAACACAACTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

546

Amino Acids

62.39

Weight (kDa)

5.37

Isoelectric Point (pI)

40.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 3 - 76 1.5e-19 Transposase-associated domain
Transposase_24 PF03004 303 - 435 1.9e-23 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 247
AccI GTMKAC 1 cut(s) 1619
AccII CGCG 1 cut(s) 664
AccIII TCCGGA 2 cut(s) 233, 766
AciI CCGC 1 cut(s) 944
AclWI GGATC 1 cut(s) 92
AcsI RAATTY 2 cut(s) 654, 1140
AfaI GTAC 3 cut(s) 1439, 1510, 1567
AfiI CCNNNNNNNGG 2 cut(s) 347, 566
AflIII ACRYGT 1 cut(s) 1273
AgsI TTSAA 2 cut(s) 1139, 1180
AhlI ACTAGT 1 cut(s) 467
AjiI CACGTC 1 cut(s) 1274
AjnI CCWGG 1 cut(s) 340
AleI CACNNNNGTG 1 cut(s) 1247
AloI GAACNNNNNNTCC 2 cut(s) 663, 695
AluBI AGCT 6 cut(s) 127, 245, 407, 428, 527, 1384
AluI AGCT 6 cut(s) 127, 245, 407, 428, 527, 1384
Alw26I GTCTC 4 cut(s) 434, 959, 1416, 1463
AlwI GGATC 1 cut(s) 92
Aor13HI TCCGGA 2 cut(s) 233, 766
AoxI GGCC 1 cut(s) 1199
ApeKI GCWGC 7 cut(s) 242, 245, 428, 448, 545, 871, 1600
ApoI RAATTY 2 cut(s) 654, 1140
AseI ATTAAT 1 cut(s) 309
Asp700I GAANNNNTTC 1 cut(s) 1521
AspLEI GCGC 1 cut(s) 664
AspS9I GGNCC 1 cut(s) 236
AsuHPI GGTGA 3 cut(s) 236, 362, 427
AvaII GGWCC 1 cut(s) 236
BbsI GAAGAC 1 cut(s) 932
BbvI GCAGC 7 cut(s) 232, 254, 415, 460, 532, 883, 1612
BccI CCATC 9 cut(s) 47, 179, 662, 804, 1045, 1118, 1246, 1312, 1465
BciT130I CCWGG 1 cut(s) 342
BciVI GTATCC 1 cut(s) 1496
BcoDI GTCTC 4 cut(s) 434, 959, 1416, 1463
BcuI ACTAGT 1 cut(s) 467
BfaI CTAG 5 cut(s) 153, 468, 978, 1032, 1385
BfmI CTRYAG 2 cut(s) 240, 423
BfuAI ACCTGC 1 cut(s) 247
BfuI GTATCC 1 cut(s) 1496
BisI GCNGC 7 cut(s) 243, 246, 429, 449, 546, 872, 1601
BlsI GCNGC 7 cut(s) 244, 247, 430, 450, 547, 873, 1602
Bme1390I CCNGG 1 cut(s) 342
Bme18I GGWCC 1 cut(s) 236
BmgBI CACGTC 1 cut(s) 1274
BmgT120I GGNCC 1 cut(s) 236
BmiI GGNNCC 2 cut(s) 480, 681
BmrFI CCNGG 1 cut(s) 342
BmsI GCATC 5 cut(s) 460, 589, 600, 718, 1252
BpiI GAAGAC 1 cut(s) 932
BpuEI CTTGAG 1 cut(s) 1519
BsaBI GATNNNNATC 1 cut(s) 1575
BsaJI CCNNGG 1 cut(s) 253
BsaWI WCCGGW 2 cut(s) 233, 766
BsaXI ACNNNNNCTCC 4 cut(s) 663, 693, 984, 1014
Bsc4I CCNNNNNNNGG 2 cut(s) 347, 566
Bse1I ACTGG 6 cut(s) 41, 183, 394, 611, 824, 1018
Bse3DI GCAATG 3 cut(s) 784, 917, 1110
Bse8I GATNNNNATC 1 cut(s) 1575
BseAI TCCGGA 2 cut(s) 233, 766
BseBI CCWGG 1 cut(s) 342
BseDI CCNNGG 1 cut(s) 253
BseGI GGATG 7 cut(s) 295, 615, 733, 766, 775, 871, 1123
BseJI GATNNNNATC 1 cut(s) 1575
BseLI CCNNNNNNNGG 2 cut(s) 347, 566
BseMI GCAATG 3 cut(s) 784, 917, 1110
BseMII CTCAG 1 cut(s) 552
BseNI ACTGG 6 cut(s) 41, 183, 394, 611, 824, 1018
BseRI GAGGAG 3 cut(s) 1008, 1166, 1208
BseXI GCAGC 7 cut(s) 232, 254, 415, 460, 532, 883, 1612
Bsh1236I CGCG 1 cut(s) 664
BshFI GGCC 1 cut(s) 1201
BsiSI CCGG 2 cut(s) 234, 767
BslFI GGGAC 2 cut(s) 830, 986
BslI CCNNNNNNNGG 2 cut(s) 347, 566
BsmAI GTCTC 4 cut(s) 434, 959, 1416, 1463
BsmBI CGTCTC 1 cut(s) 1463
BsmFI GGGAC 2 cut(s) 830, 986
BsmI GAATGC 1 cut(s) 709
BsnI GGCC 1 cut(s) 1201
Bsp13I TCCGGA 2 cut(s) 233, 766
Bsp143I GATC 4 cut(s) 97, 279, 377, 1390
BspACI CCGC 1 cut(s) 944
BspANI GGCC 1 cut(s) 1201
BspCNI CTCAG 1 cut(s) 553
BspEI TCCGGA 2 cut(s) 233, 766
BspFNI CGCG 1 cut(s) 664
BspHI TCATGA 3 cut(s) 1144, 1525, 1634
BspLI GGNNCC 2 cut(s) 480, 681
BspMAI CTGCAG 1 cut(s) 244
BspMI ACCTGC 1 cut(s) 247
BspPI GGATC 1 cut(s) 92
BsrDI GCAATG 3 cut(s) 784, 917, 1110
BsrI ACTGG 6 cut(s) 41, 183, 394, 611, 824, 1018
BssECI CCNNGG 1 cut(s) 253
BssMI GATC 4 cut(s) 97, 279, 377, 1390
BssT1I CCWWGG 1 cut(s) 253
Bst2UI CCWGG 1 cut(s) 342
Bst6I CTCTTC 1 cut(s) 1227
BstDEI CTNAG 3 cut(s) 528, 561, 1550
BstENI CCTNNNNNAGG 1 cut(s) 345
BstF5I GGATG 7 cut(s) 295, 615, 733, 766, 775, 871, 1123
BstFNI CGCG 1 cut(s) 664
BstHHI GCGC 1 cut(s) 664
BstKTI GATC 4 cut(s) 100, 282, 380, 1393
BstMAI GTCTC 4 cut(s) 434, 959, 1416, 1463
BstMBI GATC 4 cut(s) 97, 279, 377, 1390
BstNI CCWGG 1 cut(s) 342
BstNSI RCATGY 1 cut(s) 1285
BstSCI CCNGG 1 cut(s) 340
BstSFI CTRYAG 2 cut(s) 240, 423
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 7 cut(s) 232, 254, 415, 460, 532, 883, 1612
BstV2I GAAGAC 1 cut(s) 932
BstXI CCANNNNNNTGG 1 cut(s) 260
BsuI GTATCC 1 cut(s) 1496
BsuRI GGCC 1 cut(s) 1201
BtgZI GCGATG 1 cut(s) 429
BtrI CACGTC 1 cut(s) 1274
BtsCI GGATG 7 cut(s) 295, 615, 733, 766, 775, 871, 1123
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 1 cut(s) 330
BveI ACCTGC 1 cut(s) 247
CciI TCATGA 3 cut(s) 1144, 1525, 1634
CfoI GCGC 1 cut(s) 664
Cfr13I GGNCC 1 cut(s) 236
CseI GACGC 1 cut(s) 82
Csp6I GTAC 3 cut(s) 1438, 1509, 1566
CviQI GTAC 3 cut(s) 1438, 1509, 1566
DdeI CTNAG 3 cut(s) 528, 561, 1550
DpnI GATC 4 cut(s) 99, 281, 379, 1392
DpnII GATC 4 cut(s) 97, 279, 377, 1390
Eam1104I CTCTTC 1 cut(s) 1227
EarI CTCTTC 1 cut(s) 1227
Eco130I CCWWGG 1 cut(s) 253
Eco47I GGWCC 1 cut(s) 236
EcoNI CCTNNNNNAGG 1 cut(s) 345
EcoRII CCWGG 1 cut(s) 340
EcoT14I CCWWGG 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 253
Esp3I CGTCTC 1 cut(s) 1463
FaqI GGGAC 2 cut(s) 830, 986
FblI GTMKAC 1 cut(s) 1619
Fnu4HI GCNGC 7 cut(s) 243, 246, 429, 449, 546, 872, 1601
FokI GGATG 7 cut(s) 302, 622, 740, 773, 782, 878, 1130
Fsp4HI GCNGC 7 cut(s) 243, 246, 429, 449, 546, 872, 1601
FspBI CTAG 5 cut(s) 153, 468, 978, 1032, 1385
GlaI GCGC 1 cut(s) 663
GluI GCNGC 7 cut(s) 243, 246, 429, 449, 546, 872, 1601
HaeIII GGCC 1 cut(s) 1201
HapII CCGG 2 cut(s) 234, 767
HgaI GACGC 1 cut(s) 82
HhaI GCGC 1 cut(s) 664
Hin6I GCGC 1 cut(s) 662
HinP1I GCGC 1 cut(s) 662
HincII GTYRAC 2 cut(s) 268, 1130
HindII GTYRAC 2 cut(s) 268, 1130
HinfI GANTC 8 cut(s) 136, 275, 325, 503, 831, 1409, 1522, 1529
HpaI GTTAAC 1 cut(s) 268
HpaII CCGG 2 cut(s) 234, 767
HphI GGTGA 3 cut(s) 236, 362, 427
Hpy166II GTNNAC 7 cut(s) 227, 268, 644, 1130, 1517, 1541, 1620
Hpy188I TCNGA 5 cut(s) 135, 274, 439, 474, 1377
Hpy188III TCNNGA 7 cut(s) 234, 767, 835, 1145, 1229, 1526, 1635
Hpy8I GTNNAC 7 cut(s) 227, 268, 644, 1130, 1517, 1541, 1620
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 5 cut(s) 240, 469, 625, 670, 1589
HpyCH4IV ACGT 2 cut(s) 200, 1273
HpyCH4V TGCA 5 cut(s) 242, 248, 335, 986, 1265
HpyF3I CTNAG 3 cut(s) 528, 561, 1550
HpySE526I ACGT 2 cut(s) 200, 1273
HspAI GCGC 1 cut(s) 662
Kpn2I TCCGGA 2 cut(s) 233, 766
KspAI GTTAAC 1 cut(s) 268
Kzo9I GATC 4 cut(s) 97, 279, 377, 1390
LmnI GCTCC 1 cut(s) 478
Lsp1109I GCAGC 7 cut(s) 232, 254, 415, 460, 532, 883, 1612
LweI GCATC 5 cut(s) 460, 589, 600, 718, 1252
MaeI CTAG 5 cut(s) 153, 468, 978, 1032, 1385
MaeII ACGT 2 cut(s) 200, 1273
MaeIII GTNAC 4 cut(s) 415, 484, 514, 1297
MalI GATC 4 cut(s) 99, 281, 379, 1392
MboI GATC 4 cut(s) 97, 279, 377, 1390
MboII GAAGA 7 cut(s) 62, 928, 932, 1217, 1244, 1271, 1605
MfeI CAATTG 5 cut(s) 410, 1134, 1329, 1415, 1583
MlyI GAGTC 1 cut(s) 840
MmeI TCCRAC 3 cut(s) 113, 125, 883
MroI TCCGGA 2 cut(s) 233, 766
MroXI GAANNNNTTC 1 cut(s) 1521
MseI TTAA 7 cut(s) 147, 267, 309, 791, 878, 1395, 1433
MslI CAYNNNNRTG 3 cut(s) 45, 1247, 1272
MspA1I CMGCKG 2 cut(s) 245, 428
MspI CCGG 2 cut(s) 234, 767
MspR9I CCNGG 1 cut(s) 342
MunI CAATTG 5 cut(s) 410, 1134, 1329, 1415, 1583
Mva1269I GAATGC 1 cut(s) 709
MvaI CCWGG 1 cut(s) 342
MvnI CGCG 1 cut(s) 664
NdeII GATC 4 cut(s) 97, 279, 377, 1390
NlaIV GGNNCC 2 cut(s) 480, 681
NmuCI GTSAC 1 cut(s) 415
NspI RCATGY 1 cut(s) 1285
OliI CACNNNNGTG 1 cut(s) 1247
PagI TCATGA 3 cut(s) 1144, 1525, 1634
PctI GAATGC 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 1521
PfeI GAWTC 7 cut(s) 136, 275, 325, 503, 1409, 1522, 1529
PkrI GCNGC 7 cut(s) 244, 247, 430, 450, 547, 873, 1602
PleI GAGTC 1 cut(s) 839
PpsI GAGTC 1 cut(s) 839
PshBI ATTAAT 1 cut(s) 309
Psp6I CCWGG 1 cut(s) 340
PspGI CCWGG 1 cut(s) 340
PspN4I GGNNCC 2 cut(s) 480, 681
PspPI GGNCC 1 cut(s) 236
PstI CTGCAG 1 cut(s) 244
PvuII CAGCTG 2 cut(s) 245, 428
RsaI GTAC 3 cut(s) 1439, 1510, 1567
RsaNI GTAC 3 cut(s) 1438, 1509, 1566
RseI CAYNNNNRTG 3 cut(s) 45, 1247, 1272
SaqAI TTAA 7 cut(s) 147, 267, 309, 791, 878, 1395, 1433
SatI GCNGC 7 cut(s) 243, 246, 429, 449, 546, 872, 1601
Sau3AI GATC 4 cut(s) 97, 279, 377, 1390
Sau96I GGNCC 1 cut(s) 236
SchI GAGTC 1 cut(s) 840
ScrFI CCNGG 1 cut(s) 342
SfaNI GCATC 5 cut(s) 460, 589, 600, 718, 1252
SfcI CTRYAG 2 cut(s) 240, 423
SinI GGWCC 1 cut(s) 236
SmiMI CAYNNNNRTG 3 cut(s) 45, 1247, 1272
SmlI CTYRAG 1 cut(s) 1534
SmoI CTYRAG 1 cut(s) 1534
SpeI ACTAGT 1 cut(s) 467
SsiI CCGC 1 cut(s) 944
SspI AATATT 1 cut(s) 1187
SspMI CTAG 5 cut(s) 153, 468, 978, 1032, 1385
StyD4I CCNGG 1 cut(s) 340
StyI CCWWGG 1 cut(s) 253
TaiI ACGT 2 cut(s) 203, 1276
TaqI TCGA 5 cut(s) 96, 278, 376, 829, 1018
TatI WGTACW 1 cut(s) 1508
TfiI GAWTC 7 cut(s) 136, 275, 325, 503, 1409, 1522, 1529
Tru1I TTAA 7 cut(s) 147, 267, 309, 791, 878, 1395, 1433
Tru9I TTAA 7 cut(s) 147, 267, 309, 791, 878, 1395, 1433
TscAI CASTG 1 cut(s) 337
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 7 cut(s) 242, 245, 428, 448, 545, 871, 1600
Tsp45I GTSAC 1 cut(s) 415
TspGWI ACGGA 4 cut(s) 47, 351, 773, 878
TspRI CASTG 1 cut(s) 337
VpaK11BI GGWCC 1 cut(s) 236
VspI ATTAAT 1 cut(s) 309
XagI CCTNNNNNAGG 1 cut(s) 345
XapI RAATTY 2 cut(s) 654, 1140
XceI RCATGY 1 cut(s) 1285
XmiI GTMKAC 1 cut(s) 1619
XmnI GAANNNNTTC 1 cut(s) 1521
XspI CTAG 5 cut(s) 153, 468, 978, 1032, 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.