Rmu_sc0006422.1_g000005

Transposase family tnp2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006422.1
OG0000136
Physical Location & Seq
Reverse (-)
17140 .. 19911
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006422.1_g000005.1.cds

Sequence Viewer

Length: 2562 bp
atgttttgtttgattgatctagaaaacttgcatctcacaatggataagagttggataaacttaggcaacagatggtcaaagagggttattgatggttatgaagactttttgaagtttgcatacaccaataagaatgaaagtgaactaataagctgtccatgtagaaaatgttgcaatcggcccatttatttgcccaaagaaactgtgcgaaaacatctcaaagataatgggttcttgagaaaatatacgaattggatttatcatggagaacctccagttgctactaaccatgccaactctgaaattgaaactgaagttgatttaaatgttcaagatgatatgtttgaaatgttgcatgaagctatgggcattccaaatatgggtgaaactgatcatcctccatcagtttatcaccaagttgggccaaatcaaactacttctcactttttaaagctgttggaaggtgcacaacttccactatatccgggctgtaaacgctttactgcattatcattcattgttcgaatgatgcataataaagttttacatgggtggtcagataaatcattcacgaggttactcaaggacttggctagtgctttcccggaggacgtcttacttcccaagtcctactatgaggctagaaaaataacaaaagatttaggttttgttgggaagttgggacttcccagggaggttgggacttgtcatcgtcggtggctgcctaatggccataggtttcgaaaggatgggaagaattttaatgctaaacttgaatttagagcaaaacctaacacattgtctggagttgatttgttgagacaaatagagtctgaaggtattatcactgaatacaaaatggaggatctcctaacaaggaaaagaaaaccagcagctgtagaagtagatgctcatggaaaaaaaaaacgaaaaccacataattggaagaaaaaaagcatcttctttgagttgccttattggaagcacaatttgatacgtcacaatcttgatgtaatgcatatagagaagaatgtttgtgacaatgttttgtggaccatattaggagatgcaaaaagtaaggacagcttgaattctcgacgagatcttgaagaaatgaatattaaaaatcatttgcacttgaagattgatgaatctggtaaacccaaggcacctgatgcagagtttgagatgaaaaacaatggcaaagacttgttcctaaatgtaattcatgagtatagagcaccagatgggcatgcctctaacatttcgcgtcgtgtgcgtttgcaagatagaaccttgggaggtttaaagagccatgattgtcacattcttgttcaagagttgatcccattagctataagaaaatccttgcccaaaaatgtggttgaagtattgattgatttgggcagattttttaaacaattgtgctcaaaaacaaactgtgcagcagacttagaaaaagcacaagagggaattgtgttaacaatttgtaagctggaaaagatatttccaccctcgttctttaatataatggagcatttacctatccatttggcagaggaagcacttattggtggtgctgttcagtttcggtggatgtaccctattgaaaggtacctctttactttgaaagaatatgtgcgtaaccgagctcatccagaagcttcaattgctgaaggctacttgatggcagagtgtatgcatttatgttctctttatctaaatgatgtggaaaccaagtcaaatcgaccaaagaggaacaaagatggtgatggggagagacatgggattaaattcaagcttacagacattgaatgggtacaggctcatagatggatcttgttccatacggatgttgttacaccttacttaagaagccacaaccctcaagctgatgaccatgaaattcaacgtatccattttgacaacttccatacatggtttggcgatcatgtcaaaaacttggaaaacataagtgctacagctgtgcctttagaaatcagtgttttagcaaaaggacctagtgatcaagcagtgaagtttaattcatacaaagtgaatggatacaactttcgtgttaaaaagcttgatgataaaaaggaaacacagaatagtggtgtaactttgaaggcagataccatgagtgttgctagtcggaatgacaagcatccttctgttgatcctttggcttactatgggcaattgattgatattgtcaaaatcaattactcagaagaattaaaatttgacttatttaagtgtgattggatagatactgcatcagggacaaaacaagactgttttgagtacactttggtcaactttaagcatttgttgtacaaacatgatcgagtggataatgaacctttcattttggcatcccaagcacatcaagtttattatgttcctgatccattggagaaagattggtcaagtgttgtcatatcccctgcaatagagttatgtgatgctgatagttatcctgaagctgacccttatatgttgctggaagttgatgagaattcaatagctttggatgatacagaaatgatcgaagcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

853

Amino Acids

98.65

Weight (kDa)

6.8

Isoelectric Point (pI)

39.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 615
Acc65I GGTACC 1 cut(s) 1614
AccB1I GGYRCC 2 cut(s) 1168, 1614
AccII CGCG 1 cut(s) 1270
AclWI GGATC 5 cut(s) 873, 1339, 1844, 2174, 2405
AcoI YGGCCR 1 cut(s) 730
AcsI RAATTY 7 cut(s) 757, 776, 1090, 1793, 1905, 2243, 2521
AcuI CTGAAG 4 cut(s) 333, 855, 1695, 2505
AcyI GRCGYC 1 cut(s) 612
AfaI GTAC 5 cut(s) 1601, 1616, 1821, 2309, 2339
AfiI CCNNNNNNNGG 1 cut(s) 380
AflII CTTAAG 1 cut(s) 1870
AjnI CCWGG 1 cut(s) 689
AjuI GAANNNNNNNTTGG 2 cut(s) 1554, 1586
Alw21I GWGCWC 4 cut(s) 469, 1243, 1430, 1654
Alw26I GTCTC 2 cut(s) 814, 1774
Alw44I GTGCAC 1 cut(s) 465
AlwI GGATC 5 cut(s) 873, 1339, 1844, 2174, 2405
AlwNI CAGNNNCTG 1 cut(s) 896
AoxI GGCC 3 cut(s) 179, 422, 730
ApaLI GTGCAC 1 cut(s) 465
ApeKI GCWGC 3 cut(s) 721, 893, 1445
ApoI RAATTY 7 cut(s) 757, 776, 1090, 1793, 1905, 2243, 2521
Asp718I GGTACC 1 cut(s) 1614
AspS9I GGNCC 4 cut(s) 180, 422, 1053, 2018
AsuC2I CCSGG 2 cut(s) 486, 605
AsuHPI GGTGA 3 cut(s) 395, 404, 1781
AsuII TTCGAA 2 cut(s) 523, 742
AvaII GGWCC 2 cut(s) 1053, 2018
BaeGI GKGCMC 1 cut(s) 469
BalI TGGCCA 1 cut(s) 732
BanI GGYRCC 2 cut(s) 1168, 1614
BanII GRGCYC 1 cut(s) 1654
BarI GAAGNNNNNNTAC 2 cut(s) 104, 136
BauI CACGAG 1 cut(s) 571
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 4 cut(s) 469, 1243, 1430, 1654
BbvI GCAGC 3 cut(s) 708, 905, 1457
BccI CCATC 9 cut(s) 66, 86, 409, 743, 1241, 1681, 1760, 1766, 1827
BciT130I CCWGG 1 cut(s) 691
BciVI GTATCC 2 cut(s) 1925, 2057
BclI TGATCA 2 cut(s) 391, 2026
BcnI CCSGG 2 cut(s) 486, 605
BcoDI GTCTC 2 cut(s) 814, 1774
BfaI CTAG 5 cut(s) 20, 594, 642, 2022, 2151
BfmI CTRYAG 2 cut(s) 897, 1980
BfrI CTTAAG 1 cut(s) 1870
BfuI GTATCC 2 cut(s) 1925, 2057
BglII AGATCT 1 cut(s) 1102
BisI GCNGC 3 cut(s) 722, 894, 1446
BlsI GCNGC 3 cut(s) 723, 895, 1447
Bme1390I CCNGG 3 cut(s) 486, 605, 691
Bme18I GGWCC 2 cut(s) 1053, 2018
BmgT120I GGNCC 4 cut(s) 180, 422, 1053, 2018
BmiI GGNNCC 2 cut(s) 1170, 1616
BmrFI CCNGG 3 cut(s) 486, 605, 691
BpiI GAAGAC 1 cut(s) 108
BpmI CTGGAG 2 cut(s) 258, 825
Bpu14I TTCGAA 2 cut(s) 523, 742
BpuEI CTTGAG 3 cut(s) 256, 566, 1872
BpuMI CCSGG 2 cut(s) 486, 605
BsaBI GATNNNNATC 1 cut(s) 2478
BsaHI GRCGYC 1 cut(s) 612
BsaJI CCNNGG 4 cut(s) 689, 690, 1164, 1296
Bsc4I CCNNNNNNNGG 1 cut(s) 380
Bse1I ACTGG 1 cut(s) 275
Bse8I GATNNNNATC 1 cut(s) 2478
BseBI CCWGG 1 cut(s) 691
BseDI CCNNGG 4 cut(s) 689, 690, 1164, 1296
BseGI GGATG 8 cut(s) 394, 754, 1602, 1654, 1858, 2167, 2378, 2542
BseJI GATNNNNATC 1 cut(s) 2478
BseLI CCNNNNNNNGG 1 cut(s) 380
BseMII CTCAG 1 cut(s) 2244
BseNI ACTGG 1 cut(s) 275
BseSI GKGCMC 1 cut(s) 469
BseXI GCAGC 3 cut(s) 708, 905, 1457
BsgI GTGCAG 1 cut(s) 1464
Bsh1236I CGCG 1 cut(s) 1270
BshFI GGCC 3 cut(s) 181, 424, 732
BshNI GGYRCC 2 cut(s) 1168, 1614
BsiHKAI GWGCWC 4 cut(s) 469, 1243, 1430, 1654
BsiSI CCGG 2 cut(s) 485, 605
BslFI GGGAC 3 cut(s) 696, 715, 2299
BslI CCNNNNNNNGG 1 cut(s) 380
BsmAI GTCTC 2 cut(s) 814, 1774
BsmFI GGGAC 3 cut(s) 696, 715, 2299
BsmI GAATGC 1 cut(s) 369
BsnI GGCC 3 cut(s) 181, 424, 732
Bsp119I TTCGAA 2 cut(s) 523, 742
Bsp1286I GDGCHC 4 cut(s) 469, 1243, 1430, 1654
Bsp1407I TGTACA 1 cut(s) 2337
BspANI GGCC 3 cut(s) 181, 424, 732
BspCNI CTCAG 1 cut(s) 2243
BspFNI CGCG 1 cut(s) 1270
BspHI TCATGA 1 cut(s) 1228
BspLI GGNNCC 2 cut(s) 1170, 1616
BspPI GGATC 5 cut(s) 873, 1339, 1844, 2174, 2405
BspT104I TTCGAA 2 cut(s) 523, 742
BspT107I GGYRCC 2 cut(s) 1168, 1614
BspTI CTTAAG 1 cut(s) 1870
BsrGI TGTACA 1 cut(s) 2337
BsrI ACTGG 1 cut(s) 275
BssECI CCNNGG 4 cut(s) 689, 690, 1164, 1296
BssNI GRCGYC 1 cut(s) 612
BssSI CACGAG 1 cut(s) 571
BssT1I CCWWGG 2 cut(s) 1164, 1296
Bst2BI CACGAG 1 cut(s) 571
Bst2UI CCWGG 1 cut(s) 691
Bst4CI ACNGT 3 cut(s) 205, 1442, 2300
BstACI GRCGYC 1 cut(s) 612
BstAFI CTTAAG 1 cut(s) 1870
BstAPI GCANNNNNTGC 1 cut(s) 1175
BstAUI TGTACA 1 cut(s) 2337
BstBI TTCGAA 2 cut(s) 523, 742
BstC8I GCNNGC 1 cut(s) 1254
BstDEI CTNAG 3 cut(s) 61, 1453, 2230
BstF5I GGATG 8 cut(s) 394, 754, 1602, 1654, 1858, 2167, 2378, 2542
BstFNI CGCG 1 cut(s) 1270
BstMAI GTCTC 2 cut(s) 814, 1774
BstMWI GCNNNNNNNGC 6 cut(s) 495, 1175, 1276, 1562, 1670, 2384
BstNI CCWGG 1 cut(s) 691
BstNSI RCATGY 1 cut(s) 1256
BstSCI CCNGG 3 cut(s) 484, 603, 689
BstSFI CTRYAG 2 cut(s) 897, 1980
BstSLI GKGCMC 1 cut(s) 469
BstUI CGCG 1 cut(s) 1270
BstV1I GCAGC 3 cut(s) 708, 905, 1457
BstV2I GAAGAC 1 cut(s) 108
BstX2I RGATCY 3 cut(s) 865, 1102, 1836
BstXI CCANNNNNNTGG 2 cut(s) 942, 1381
BstYI RGATCY 3 cut(s) 865, 1102, 1836
BsuI GTATCC 2 cut(s) 1925, 2057
BsuRI GGCC 3 cut(s) 181, 424, 732
BtsCI GGATG 8 cut(s) 394, 754, 1602, 1654, 1858, 2167, 2378, 2542
BtsI GCAGTG 1 cut(s) 2040
BtsIMutI CAGTG 3 cut(s) 846, 2008, 2040
Cac8I GCNNGC 1 cut(s) 1254
CaiI CAGNNNCTG 1 cut(s) 896
CciI TCATGA 1 cut(s) 1228
Cfr13I GGNCC 4 cut(s) 180, 422, 1053, 2018
CseI GACGC 1 cut(s) 1259
Csp6I GTAC 5 cut(s) 1600, 1615, 1820, 2308, 2338
CviQI GTAC 5 cut(s) 1600, 1615, 1820, 2308, 2338
DdeI CTNAG 3 cut(s) 61, 1453, 2230
DraI TTTAAA 4 cut(s) 324, 450, 1308, 1417
EaeI YGGCCR 1 cut(s) 730
Ecl136II GAGCTC 1 cut(s) 1652
Eco130I CCWWGG 2 cut(s) 1164, 1296
Eco24I GRGCYC 1 cut(s) 1654
Eco47I GGWCC 2 cut(s) 1053, 2018
Eco53kI GAGCTC 1 cut(s) 1652
Eco57I CTGAAG 4 cut(s) 333, 855, 1695, 2505
EcoICRI GAGCTC 1 cut(s) 1652
EcoO109I RGGNCCY 1 cut(s) 2018
EcoRI GAATTC 2 cut(s) 1090, 2521
EcoRII CCWGG 1 cut(s) 689
EcoT14I CCWWGG 2 cut(s) 1164, 1296
EcoT22I ATGCAT 3 cut(s) 534, 1020, 1704
EcoT38I GRGCYC 1 cut(s) 1654
ErhI CCWWGG 2 cut(s) 1164, 1296
FalI AAGNNNNNCTT 2 cut(s) 1070, 1102
FaqI GGGAC 3 cut(s) 696, 715, 2299
FbaI TGATCA 2 cut(s) 391, 2026
Fnu4HI GCNGC 3 cut(s) 722, 894, 1446
FokI GGATG 8 cut(s) 381, 761, 1609, 1641, 1865, 2154, 2365, 2549
FriOI GRGCYC 1 cut(s) 1654
Fsp4HI GCNGC 3 cut(s) 722, 894, 1446
FspBI CTAG 5 cut(s) 20, 594, 642, 2022, 2151
GluI GCNGC 3 cut(s) 722, 894, 1446
GsuI CTGGAG 2 cut(s) 258, 825
HaeIII GGCC 3 cut(s) 181, 424, 732
HapII CCGG 2 cut(s) 485, 605
HgaI GACGC 1 cut(s) 1259
Hin1I GRCGYC 1 cut(s) 612
HincII GTYRAC 2 cut(s) 1482, 2320
HindII GTYRAC 2 cut(s) 1482, 2320
HindIII AAGCTT 4 cut(s) 1662, 1799, 2084, 2556
HinfI GANTC 2 cut(s) 830, 1151
HpaI GTTAAC 1 cut(s) 1482
HpaII CCGG 2 cut(s) 485, 605
HphI GGTGA 3 cut(s) 395, 404, 1781
Hpy166II GTNNAC 8 cut(s) 143, 467, 494, 1053, 1160, 1482, 2310, 2320
Hpy188I TCNGA 5 cut(s) 301, 559, 835, 2157, 2233
Hpy8I GTNNAC 8 cut(s) 143, 467, 494, 1053, 1160, 1482, 2310, 2320
Hpy99I CGWCG 3 cut(s) 717, 1101, 1275
HpyAV CCTTC 5 cut(s) 455, 830, 1670, 2122, 2181
HpyCH4III ACNGT 3 cut(s) 205, 1442, 2300
HpyCH4IV ACGT 3 cut(s) 612, 997, 1912
HpyF10VI GCNNNNNNNGC 6 cut(s) 495, 1175, 1276, 1562, 1670, 2384
HpyF3I CTNAG 3 cut(s) 61, 1453, 2230
HpySE526I ACGT 3 cut(s) 612, 997, 1912
Hsp92I GRCGYC 1 cut(s) 612
KpnI GGTACC 1 cut(s) 1618
Ksp22I TGATCA 2 cut(s) 391, 2026
KspAI GTTAAC 1 cut(s) 1482
LmnI GCTCC 1 cut(s) 1534
Lsp1109I GCAGC 3 cut(s) 708, 905, 1457
MaeI CTAG 5 cut(s) 20, 594, 642, 2022, 2151
MaeII ACGT 3 cut(s) 612, 997, 1912
MaeIII GTNAC 7 cut(s) 576, 998, 1037, 1322, 1643, 1858, 2119
MboII GAAGA 8 cut(s) 113, 766, 952, 958, 1039, 1121, 1153, 2246
MfeI CAATTG 3 cut(s) 1421, 1668, 2201
MflI RGATCY 3 cut(s) 865, 1102, 1836
MhlI GDGCHC 4 cut(s) 469, 1243, 1430, 1654
MlsI TGGCCA 1 cut(s) 732
MluNI TGGCCA 1 cut(s) 732
MlyI GAGTC 1 cut(s) 839
MmeI TCCRAC 3 cut(s) 32, 438, 2135
Mox20I TGGCCA 1 cut(s) 732
Mph1103I ATGCAT 3 cut(s) 534, 1020, 1704
MscI TGGCCA 1 cut(s) 732
MslI CAYNNNNRTG 1 cut(s) 1851
Msp20I TGGCCA 1 cut(s) 732
MspA1I CMGCKG 2 cut(s) 896, 1985
MspCI CTTAAG 1 cut(s) 1870
MspI CCGG 2 cut(s) 485, 605
MspR9I CCNGG 3 cut(s) 486, 605, 691
MunI CAATTG 3 cut(s) 1421, 1668, 2201
Mva1269I GAATGC 1 cut(s) 369
MvaI CCWGG 1 cut(s) 691
MvnI CGCG 1 cut(s) 1270
MwoI GCNNNNNNNGC 6 cut(s) 495, 1175, 1276, 1562, 1670, 2384
NciI CCSGG 2 cut(s) 486, 605
NlaIV GGNNCC 2 cut(s) 1170, 1616
NmuCI GTSAC 3 cut(s) 998, 1037, 1322
NsiI ATGCAT 3 cut(s) 534, 1020, 1704
NspI RCATGY 1 cut(s) 1256
NspV TTCGAA 2 cut(s) 523, 742
PaeI GCATGC 1 cut(s) 1256
PagI TCATGA 1 cut(s) 1228
PasI CCCWGGG 1 cut(s) 690
PctI GAATGC 1 cut(s) 369
PfeI GAWTC 1 cut(s) 1151
PfoI TCCNGGA 1 cut(s) 603
PkrI GCNGC 3 cut(s) 723, 895, 1447
PleI GAGTC 1 cut(s) 838
PpsI GAGTC 1 cut(s) 838
PpuMI RGGWCCY 1 cut(s) 2018
Psp124BI GAGCTC 1 cut(s) 1654
Psp5II RGGWCCY 1 cut(s) 2018
Psp6I CCWGG 1 cut(s) 689
PspGI CCWGG 1 cut(s) 689
PspN4I GGNNCC 2 cut(s) 1170, 1616
PspPI GGNCC 4 cut(s) 180, 422, 1053, 2018
PspPPI RGGWCCY 1 cut(s) 2018
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 3 cut(s) 865, 1102, 1836
PvuII CAGCTG 2 cut(s) 896, 1985
RsaI GTAC 5 cut(s) 1601, 1616, 1821, 2309, 2339
RsaNI GTAC 5 cut(s) 1600, 1615, 1820, 2308, 2338
RseI CAYNNNNRTG 1 cut(s) 1851
SacI GAGCTC 1 cut(s) 1654
SatI GCNGC 3 cut(s) 722, 894, 1446
Sau96I GGNCC 4 cut(s) 180, 422, 1053, 2018
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 3 cut(s) 486, 605, 691
SduI GDGCHC 4 cut(s) 469, 1243, 1430, 1654
SfcI CTRYAG 2 cut(s) 897, 1980
SfuI TTCGAA 2 cut(s) 523, 742
SinI GGWCC 2 cut(s) 1053, 2018
SmiI ATTTAAAT 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 1851
SmlI CTYRAG 4 cut(s) 235, 581, 1870, 1887
SmoI CTYRAG 4 cut(s) 235, 581, 1870, 1887
SphI GCATGC 1 cut(s) 1256
SspI AATATT 1 cut(s) 1120
SspMI CTAG 5 cut(s) 20, 594, 642, 2022, 2151
SstI GAGCTC 1 cut(s) 1654
StyD4I CCNGG 3 cut(s) 484, 603, 689
StyI CCWWGG 2 cut(s) 1164, 1296
SwaI ATTTAAAT 1 cut(s) 324
TaaI ACNGT 3 cut(s) 205, 1442, 2300
TaiI ACGT 3 cut(s) 615, 1000, 1915
TaqI TCGA 6 cut(s) 523, 742, 1096, 1747, 2350, 2553
TatI WGTACW 2 cut(s) 2307, 2337
TfiI GAWTC 1 cut(s) 1151
TscAI CASTG 3 cut(s) 853, 2008, 2040
TseFI GTSAC 3 cut(s) 998, 1037, 1322
TseI GCWGC 3 cut(s) 721, 893, 1445
Tsp45I GTSAC 3 cut(s) 998, 1037, 1322
TspGWI ACGGA 1 cut(s) 1865
TspRI CASTG 3 cut(s) 853, 2008, 2040
Vha464I CTTAAG 1 cut(s) 1870
VneI GTGCAC 1 cut(s) 465
VpaK11BI GGWCC 2 cut(s) 1053, 2018
XapI RAATTY 7 cut(s) 757, 776, 1090, 1793, 1905, 2243, 2521
XbaI TCTAGA 1 cut(s) 19
XceI RCATGY 1 cut(s) 1256
XcmI CCANNNNNNNNNTGG 1 cut(s) 1940
XspI CTAG 5 cut(s) 20, 594, 642, 2022, 2151
ZraI GACGTC 1 cut(s) 613
Zsp2I ATGCAT 3 cut(s) 534, 1020, 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.