Rorug02G0362200

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000136
Physical Location & Seq
Reverse (-)
45953830 .. 45955677
1848 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0362200.1

Sequence Viewer

Length: 1536 bp
ATGAAGATGGAGCTAATGGACGTGTTCATCCTTTTTTTGGGGGCCGTTTTTCTCCGGCTATGGTGGCGCTACTGGTCCGTCACAGGCGGCGGAAAGAACAATCTTCCACCGGGTCCGCCGGGCTGGCCGGTGGTGGGAAACCTGATCCAAGTGATCCTCGAACGTCGACCGTTCATCTTTGTAGTACGCGATTTACGTAAAAAGTATGGACCCATCTTCAGCATGCAAATGGGCCAACGCACACTCATCATCATCACCAGCTCCGACCTCATCCACGAAGGCCTCGTCCAGCGGGGTCCCGACTTCGCCAGCCGCCCCTCCGACTCTCCCATCCGACTCATCTTCAGCGTCGGAAAGTGTGCTATCAACTCCGGTCAGTACGGCCCTCTCTGGCGCACCCTGCGCCGCAACTTCGTGACGGAGCTTATCAACCCTACCAGGATACGCCAGTGCAGCTGGATCCGTAACTGGGCGCTGGAGCATCATATGAAGCGCCTCAAGTCCGAGGCCACGGAGCACGGCTCCGTGGAGGTGATTAGCAACTGCAGGCTCACCATCTGCAGCGTGCTCATCTGCCTCTGCTTCGGCGCGAAGATCTCAGAGGAGAGAATCAAAGTCATTGAGAGTATACTCAAGGATGTCATGATGATGACGACTCCGAAGCTCCCCGACTTCCTGCCGCTGCTGACTCCGCTGTTCCGACGGCAGGTGAAGGAGGCCAAAAAGCTACGGAAGAAGCAACTGGAGTGTCTGGTTCCGCTGATAAGAAACCGAAAGGCTTTTCTCGATGGAGGGGGTGTTGTCAACGAGGAGATGGTGAGTCCAAATGGTGCTGCGTATATCGACTCTCTGTTCAGGCTTGATGTGCCCGGAAGAGGTAAGCTGGGAGAGGAAGAGCTCGTTACTCTTGTCTCGGAAGCCATCAACGCCGGGACGGACACGAGTGCTTCGACGACGGAGTGGGCGTTGCTTAATTTGGTGATGAACCAGGAGATCCAAGATAAGCTGTATAAGGAGATTGTTGAGAGTGTTGGGAAAGATGGGGTGGTCACCGAGAATGACGTGGAGAAAATGACCTATCTTACCGCGGTGGTTAAAGAGACTTTCCGGCGACACCCGCCGAGCCACTTTCTTCTGTCGCACGCGGCGGTGAAGGAGACGGAGCTCGCTGGGTACACCATTCCGGCTGATGCCAGCGTGGAGTTTTACACTGCATGGGTGACGGAGGATCCGGAGATGTGGAAGGATCCGGGCGAGTTCCGACCCGAGAGGTTCTTGGATGGAGATGGAGTTGACGTGGACATAACTGGTACAAAAGGAGTGAAGATGGTGCCATTCGGAGCGGGGCGGCGGATCTGCCCGGCATGGACGTTGGGGACATTGCACATAAACTTGATGCTGGCTAGGATGGTGCAGGCCTTCAAGTGGTTGCCGGTTCCGGGTTCCCCACCCGACCCGACTGAGACCTTTGCTTTTACTGTTGTCATGAAGAACCCTCTCAAGGCTGTGATTGTGCCTAGGTCAATGATCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

511

Amino Acids

57.61

Weight (kDa)

8.96

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 499 2.9e-94 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 697
Acc36I ACCTGC 1 cut(s) 697
AccB1I GGYRCC 1 cut(s) 1330
AccBSI CCGCTC 1 cut(s) 1343
AccI GTMKAC 2 cut(s) 166, 628
AccII CGCG 4 cut(s) 189, 590, 1088, 1145
AccIII TCCGGA 1 cut(s) 1231
AcoI YGGCCR 1 cut(s) 125
AcuI CTGAAG 2 cut(s) 202, 328
AfaI GTAC 4 cut(s) 186, 380, 1175, 1312
AfiI CCNNNNNNNGG 8 cut(s) 37, 134, 469, 706, 875, 1425, 1439, 1501
AflIII ACRYGT 1 cut(s) 21
AgsI TTSAA 1 cut(s) 1423
AjiI CACGTC 3 cut(s) 22, 1063, 1297
AjnI CCWGG 2 cut(s) 437, 987
Alw21I GWGCWC 4 cut(s) 519, 570, 900, 1167
Alw26I GTCTC 4 cut(s) 916, 1094, 1151, 1457
Ama87I CYCGRG 1 cut(s) 1265
Aor13HI TCCGGA 1 cut(s) 1231
AoxI GGCC 8 cut(s) 42, 125, 232, 280, 382, 507, 717, 1416
ApeKI GCWGC 4 cut(s) 453, 561, 682, 833
ArsI GACNNNNNNTTYG 2 cut(s) 270, 302
AspA2I CCTAGG 1 cut(s) 1517
AspLEI GCGC 6 cut(s) 69, 396, 405, 475, 495, 590
AspS9I GGNCC 7 cut(s) 42, 75, 113, 209, 232, 296, 383
AsuC2I CCSGG 7 cut(s) 111, 120, 870, 931, 1251, 1361, 1440
AsuHPI GGTGA 9 cut(s) 247, 544, 544, 721, 829, 991, 1042, 1162, 1231
AvaI CYCGRG 1 cut(s) 1265
AvaII GGWCC 4 cut(s) 75, 113, 209, 296
AvrII CCTAGG 1 cut(s) 1517
BaeGI GKGCMC 1 cut(s) 870
BaeI ACNNNNGTAYC 2 cut(s) 434, 467
BamHI GGATCC 3 cut(s) 459, 1228, 1246
BanI GGYRCC 1 cut(s) 1330
BanII GRGCYC 2 cut(s) 900, 1167
BauI CACGAG 1 cut(s) 940
Bbv12I GWGCWC 4 cut(s) 519, 570, 900, 1167
BbvI GCAGC 4 cut(s) 465, 573, 669, 820
BceAI ACGGC 4 cut(s) 29, 397, 535, 719
BciT130I CCWGG 2 cut(s) 439, 989
BciVI GTATCC 1 cut(s) 435
BclI TGATCA 1 cut(s) 1527
BcnI CCSGG 7 cut(s) 111, 120, 870, 931, 1251, 1361, 1440
BcoDI GTCTC 4 cut(s) 916, 1094, 1151, 1457
BfaI CTAG 2 cut(s) 1404, 1518
BfmI CTRYAG 2 cut(s) 544, 559
BfoI RGCGCY 3 cut(s) 70, 476, 496
BfuAI ACCTGC 1 cut(s) 697
BfuI GTATCC 1 cut(s) 435
BglI GCCNNNNNGGC 1 cut(s) 124
BglII AGATCT 1 cut(s) 594
BlnI CCTAGG 1 cut(s) 1517
Bme1390I CCNGG 9 cut(s) 111, 120, 439, 870, 931, 989, 1251, 1361, 1440
Bme18I GGWCC 4 cut(s) 75, 113, 209, 296
BmeT110I CYCGRG 1 cut(s) 1265
BmgBI CACGTC 3 cut(s) 22, 1063, 1297
BmgT120I GGNCC 7 cut(s) 42, 75, 113, 209, 232, 296, 383
BmrFI CCNGG 9 cut(s) 111, 120, 439, 870, 931, 989, 1251, 1361, 1440
BmrI ACTGGG 1 cut(s) 478
BmsI GCATC 3 cut(s) 490, 1180, 1386
BmuI ACTGGG 1 cut(s) 478
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpmI CTGGAG 2 cut(s) 497, 764
BpuEI CTTGAG 3 cut(s) 482, 617, 1484
BpuMI CCSGG 7 cut(s) 111, 120, 870, 931, 1251, 1361, 1440
BsaAI YACGTR 1 cut(s) 197
BsaI GGTCTC 1 cut(s) 1457
BsaJI CCNNGG 5 cut(s) 504, 510, 525, 1086, 1517
BsaWI WCCGGW 2 cut(s) 371, 1231
BsaXI ACNNNNNCTCC 8 cut(s) 783, 813, 950, 980, 1275, 1281, 1305, 1311
Bsc4I CCNNNNNNNGG 8 cut(s) 37, 134, 469, 706, 875, 1425, 1439, 1501
Bse118I RCCGGY 2 cut(s) 127, 1432
Bse1I ACTGG 5 cut(s) 77, 448, 473, 747, 1312
Bse3DI GCAATG 1 cut(s) 1379
BseAI TCCGGA 1 cut(s) 1231
BseBI CCWGG 2 cut(s) 439, 989
BseDI CCNNGG 5 cut(s) 504, 510, 525, 1086, 1517
BseGI GGATG 6 cut(s) 27, 270, 330, 643, 1285, 1413
BseLI CCNNNNNNNGG 8 cut(s) 37, 134, 469, 706, 875, 1425, 1439, 1501
BseMI GCAATG 1 cut(s) 1379
BseMII CTCAG 2 cut(s) 612, 1452
BseNI ACTGG 5 cut(s) 77, 448, 473, 747, 1312
BseRI GAGGAG 2 cut(s) 617, 824
BseSI GKGCMC 1 cut(s) 870
BseXI GCAGC 4 cut(s) 465, 573, 669, 820
BseYI CCCAGC 2 cut(s) 883, 1169
BsgI GTGCAG 2 cut(s) 472, 1433
Bsh1236I CGCG 4 cut(s) 189, 590, 1088, 1145
Bsh1285I CGRYCG 1 cut(s) 170
BshFI GGCC 8 cut(s) 44, 127, 234, 282, 384, 509, 719, 1418
BshNI GGYRCC 1 cut(s) 1330
BsiEI CGRYCG 1 cut(s) 170
BsiHKAI GWGCWC 4 cut(s) 519, 570, 900, 1167
BsiHKCI CYCGRG 1 cut(s) 1265
BslFI GGGAC 3 cut(s) 282, 946, 1390
BslI CCNNNNNNNGG 8 cut(s) 37, 134, 469, 706, 875, 1425, 1439, 1501
BsmAI GTCTC 4 cut(s) 916, 1094, 1151, 1457
BsmBI CGTCTC 1 cut(s) 1151
BsmFI GGGAC 3 cut(s) 282, 946, 1390
BsnI GGCC 8 cut(s) 44, 127, 234, 282, 384, 509, 719, 1418
Bso31I GGTCTC 1 cut(s) 1457
BsoBI CYCGRG 1 cut(s) 1265
Bsp1286I GDGCHC 5 cut(s) 519, 570, 870, 900, 1167
Bsp13I TCCGGA 1 cut(s) 1231
Bsp143I GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
BspANI GGCC 8 cut(s) 44, 127, 234, 282, 384, 509, 719, 1418
BspCNI CTCAG 2 cut(s) 611, 1453
BspEI TCCGGA 1 cut(s) 1231
BspFNI CGCG 4 cut(s) 189, 590, 1088, 1145
BspHI TCATGA 2 cut(s) 642, 1485
BspMAI CTGCAG 2 cut(s) 548, 563
BspMI ACCTGC 1 cut(s) 697
BspQI GCTCTTC 1 cut(s) 888
BspT107I GGYRCC 1 cut(s) 1330
BspTNI GGTCTC 1 cut(s) 1457
BsrBI CCGCTC 1 cut(s) 1343
BsrDI GCAATG 1 cut(s) 1379
BsrFI RCCGGY 2 cut(s) 127, 1432
BsrI ACTGG 5 cut(s) 77, 448, 473, 747, 1312
BssAI RCCGGY 2 cut(s) 127, 1432
BssECI CCNNGG 5 cut(s) 504, 510, 525, 1086, 1517
BssMI GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
BssNAI GTATAC 1 cut(s) 629
BssSI CACGAG 1 cut(s) 940
BssT1I CCWWGG 1 cut(s) 1517
Bst1107I GTATAC 1 cut(s) 629
Bst2BI CACGAG 1 cut(s) 940
Bst2UI CCWGG 2 cut(s) 439, 989
Bst4CI ACNGT 2 cut(s) 171, 1480
Bst6I CTCTTC 2 cut(s) 868, 888
BstBAI YACGTR 1 cut(s) 197
BstDEI CTNAG 2 cut(s) 598, 1461
BstDSI CCRYGG 3 cut(s) 510, 525, 1086
BstEII GGTNACC 1 cut(s) 1048
BstF5I GGATG 6 cut(s) 27, 270, 330, 643, 1285, 1413
BstFNI CGCG 4 cut(s) 189, 590, 1088, 1145
BstH2I RGCGCY 3 cut(s) 70, 476, 496
BstHHI GCGC 6 cut(s) 69, 396, 405, 475, 495, 590
BstKTI GATC 9 cut(s) 147, 156, 462, 597, 996, 1231, 1249, 1356, 1530
BstMAI GTCTC 4 cut(s) 916, 1094, 1151, 1457
BstMBI GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
BstMCI CGRYCG 1 cut(s) 170
BstMWI GCNNNNNNNGC 9 cut(s) 64, 124, 400, 402, 453, 691, 865, 926, 1117
BstNI CCWGG 2 cut(s) 439, 989
BstNSI RCATGY 1 cut(s) 226
BstPI GGTNACC 1 cut(s) 1048
BstSCI CCNGG 9 cut(s) 109, 118, 437, 868, 929, 987, 1249, 1359, 1438
BstSFI CTRYAG 2 cut(s) 544, 559
BstSLI GKGCMC 1 cut(s) 870
BstSNI TACGTA 1 cut(s) 197
BstUI CGCG 4 cut(s) 189, 590, 1088, 1145
BstV1I GCAGC 4 cut(s) 465, 573, 669, 820
BstX2I RGATCY 6 cut(s) 459, 594, 993, 1228, 1246, 1353
BstYI RGATCY 6 cut(s) 459, 594, 993, 1228, 1246, 1353
BstZ17I GTATAC 1 cut(s) 629
BsuI GTATCC 1 cut(s) 435
BsuRI GGCC 8 cut(s) 44, 127, 234, 282, 384, 509, 719, 1418
BtgI CCRYGG 3 cut(s) 510, 525, 1086
BtrI CACGTC 3 cut(s) 22, 1063, 1297
BtsCI GGATG 6 cut(s) 27, 270, 330, 643, 1285, 1413
BtsI GCAGTG 1 cut(s) 1209
BtsIMutI CAGTG 2 cut(s) 455, 1209
BveI ACCTGC 1 cut(s) 697
CciI TCATGA 2 cut(s) 642, 1485
CfoI GCGC 6 cut(s) 69, 396, 405, 475, 495, 590
Cfr10I RCCGGY 2 cut(s) 127, 1432
Cfr13I GGNCC 7 cut(s) 42, 75, 113, 209, 232, 296, 383
Cfr42I CCGCGG 1 cut(s) 1089
CseI GACGC 1 cut(s) 337
Csp6I GTAC 4 cut(s) 185, 379, 1174, 1311
CviAII CATG 5 cut(s) 223, 643, 1215, 1365, 1486
CviQI GTAC 4 cut(s) 185, 379, 1174, 1311
DdeI CTNAG 2 cut(s) 598, 1461
DpnI GATC 9 cut(s) 146, 155, 461, 596, 995, 1230, 1248, 1355, 1529
DpnII GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
EaeI YGGCCR 1 cut(s) 125
Eam1104I CTCTTC 2 cut(s) 868, 888
EarI CTCTTC 2 cut(s) 868, 888
EciI GGCGGA 3 cut(s) 105, 105, 1366
Ecl136II GAGCTC 2 cut(s) 898, 1165
Eco105I TACGTA 1 cut(s) 197
Eco130I CCWWGG 1 cut(s) 1517
Eco147I AGGCCT 2 cut(s) 282, 1418
Eco24I GRGCYC 2 cut(s) 900, 1167
Eco31I GGTCTC 1 cut(s) 1457
Eco47I GGWCC 4 cut(s) 75, 113, 209, 296
Eco53kI GAGCTC 2 cut(s) 898, 1165
Eco57I CTGAAG 2 cut(s) 202, 328
Eco88I CYCGRG 1 cut(s) 1265
Eco91I GGTNACC 1 cut(s) 1048
EcoICRI GAGCTC 2 cut(s) 898, 1165
EcoO109I RGGNCCY 1 cut(s) 296
EcoO65I GGTNACC 1 cut(s) 1048
EcoRII CCWGG 2 cut(s) 437, 987
EcoT14I CCWWGG 1 cut(s) 1517
EcoT38I GRGCYC 2 cut(s) 900, 1167
ErhI CCWWGG 1 cut(s) 1517
Esp3I CGTCTC 1 cut(s) 1151
FaeI CATG 5 cut(s) 226, 646, 1218, 1368, 1489
FaqI GGGAC 3 cut(s) 282, 946, 1390
FatI CATG 5 cut(s) 222, 642, 1214, 1364, 1485
FauI CCCGC 3 cut(s) 285, 1125, 1336
FauNDI CATATG 1 cut(s) 486
FbaI TGATCA 1 cut(s) 1527
FblI GTMKAC 2 cut(s) 166, 628
FokI GGATG 6 cut(s) 14, 257, 317, 650, 1292, 1420
FriOI GRGCYC 2 cut(s) 900, 1167
FspBI CTAG 2 cut(s) 1404, 1518
GlaI GCGC 6 cut(s) 68, 395, 404, 474, 494, 589
GsaI CCCAGC 2 cut(s) 887, 1173
GsuI CTGGAG 2 cut(s) 497, 764
HaeII RGCGCY 3 cut(s) 70, 476, 496
HaeIII GGCC 8 cut(s) 44, 127, 234, 282, 384, 509, 719, 1418
HgaI GACGC 1 cut(s) 337
HhaI GCGC 6 cut(s) 69, 396, 405, 475, 495, 590
Hin1II CATG 5 cut(s) 226, 646, 1218, 1368, 1489
Hin6I GCGC 6 cut(s) 67, 394, 403, 473, 493, 588
HinP1I GCGC 6 cut(s) 67, 394, 403, 473, 493, 588
HincII GTYRAC 3 cut(s) 167, 805, 1294
HindII GTYRAC 3 cut(s) 167, 805, 1294
HinfI GANTC 7 cut(s) 323, 336, 609, 655, 688, 820, 845
HphI GGTGA 9 cut(s) 247, 544, 544, 721, 829, 991, 1042, 1162, 1231
Hpy166II GTNNAC 6 cut(s) 167, 629, 805, 1176, 1294, 1300
Hpy188III TCNNGA 6 cut(s) 299, 415, 643, 785, 1232, 1486
Hpy8I GTNNAC 6 cut(s) 167, 629, 805, 1176, 1294, 1300
Hpy99I CGWCG 5 cut(s) 168, 353, 705, 955, 958
HpyAV CCTTC 5 cut(s) 272, 706, 1147, 1237, 1429
HpyCH4III ACNGT 2 cut(s) 171, 1480
HpyCH4IV ACGT 6 cut(s) 21, 163, 196, 1062, 1296, 1370
HpyCH4V TGCA 7 cut(s) 226, 453, 546, 561, 1214, 1384, 1414
HpyF10VI GCNNNNNNNGC 9 cut(s) 64, 124, 400, 402, 453, 691, 865, 926, 1117
HpyF3I CTNAG 2 cut(s) 598, 1461
HpySE526I ACGT 6 cut(s) 21, 163, 196, 1062, 1296, 1370
Hsp92II CATG 5 cut(s) 226, 646, 1218, 1368, 1489
HspAI GCGC 6 cut(s) 67, 394, 403, 473, 493, 588
KflI GGGWCCC 1 cut(s) 296
Kpn2I TCCGGA 1 cut(s) 1231
Ksp22I TGATCA 1 cut(s) 1527
KspI CCGCGG 1 cut(s) 1089
Kzo9I GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
LguI GCTCTTC 1 cut(s) 888
LmnI GCTCC 9 cut(s) 10, 266, 421, 478, 514, 527, 669, 1162, 1340
Lsp1109I GCAGC 4 cut(s) 465, 573, 669, 820
LweI GCATC 3 cut(s) 490, 1180, 1386
MaeI CTAG 2 cut(s) 1404, 1518
MaeII ACGT 6 cut(s) 21, 163, 196, 1062, 1296, 1370
MaeIII GTNAC 6 cut(s) 79, 415, 464, 901, 1048, 1219
MalI GATC 9 cut(s) 146, 155, 461, 596, 995, 1230, 1248, 1355, 1529
MbiI CCGCTC 1 cut(s) 1343
MboI GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
MflI RGATCY 6 cut(s) 459, 594, 993, 1228, 1246, 1353
MhlI GDGCHC 5 cut(s) 519, 570, 870, 900, 1167
MluCI AATT 1 cut(s) 973
MlyI GAGTC 6 cut(s) 317, 330, 649, 682, 829, 839
MmeI TCCRAC 6 cut(s) 288, 331, 345, 358, 724, 1285
MroI TCCGGA 1 cut(s) 1231
MseI TTAA 2 cut(s) 972, 1095
MslI CAYNNNNRTG 2 cut(s) 227, 647
MspA1I CMGCKG 6 cut(s) 292, 456, 682, 694, 760, 1088
MspR9I CCNGG 9 cut(s) 111, 120, 439, 870, 931, 989, 1251, 1361, 1440
MvaI CCWGG 2 cut(s) 439, 989
MvnI CGCG 4 cut(s) 189, 590, 1088, 1145
MwoI GCNNNNNNNGC 9 cut(s) 64, 124, 400, 402, 453, 691, 865, 926, 1117
NciI CCSGG 7 cut(s) 111, 120, 870, 931, 1251, 1361, 1440
NdeI CATATG 1 cut(s) 486
NdeII GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
NlaIII CATG 5 cut(s) 226, 646, 1218, 1368, 1489
NmeAIII GCCGAG 1 cut(s) 1146
NmuCI GTSAC 4 cut(s) 79, 415, 1048, 1219
NspI RCATGY 1 cut(s) 226
PaeI GCATGC 1 cut(s) 226
PagI TCATGA 2 cut(s) 642, 1485
PaqCI CACCTGC 1 cut(s) 697
PceI AGGCCT 2 cut(s) 282, 1418
PciSI GCTCTTC 1 cut(s) 888
PcsI WCGNNNNNNNCGW 4 cut(s) 193, 282, 947, 962
PfeI GAWTC 1 cut(s) 609
PleI GAGTC 6 cut(s) 317, 330, 649, 682, 828, 839
PpsI GAGTC 6 cut(s) 317, 330, 649, 682, 828, 839
Ppu21I YACGTR 1 cut(s) 197
PpuMI RGGWCCY 1 cut(s) 296
Psp124BI GAGCTC 2 cut(s) 900, 1167
Psp5II RGGWCCY 1 cut(s) 296
Psp6I CCWGG 2 cut(s) 437, 987
PspEI GGTNACC 1 cut(s) 1048
PspFI CCCAGC 2 cut(s) 883, 1169
PspGI CCWGG 2 cut(s) 437, 987
PspPI GGNCC 7 cut(s) 42, 75, 113, 209, 232, 296, 383
PspPPI RGGWCCY 1 cut(s) 296
PstI CTGCAG 2 cut(s) 548, 563
PsuI RGATCY 6 cut(s) 459, 594, 993, 1228, 1246, 1353
PvuII CAGCTG 1 cut(s) 456
RsaI GTAC 4 cut(s) 186, 380, 1175, 1312
RsaNI GTAC 4 cut(s) 185, 379, 1174, 1311
RseI CAYNNNNRTG 2 cut(s) 227, 647
SacI GAGCTC 2 cut(s) 900, 1167
SacII CCGCGG 1 cut(s) 1089
SalI GTCGAC 1 cut(s) 165
SapI GCTCTTC 1 cut(s) 888
SaqAI TTAA 2 cut(s) 972, 1095
Sau3AI GATC 9 cut(s) 144, 153, 459, 594, 993, 1228, 1246, 1353, 1527
Sau96I GGNCC 7 cut(s) 42, 75, 113, 209, 232, 296, 383
SchI GAGTC 6 cut(s) 317, 330, 649, 682, 829, 839
ScrFI CCNGG 9 cut(s) 111, 120, 439, 870, 931, 989, 1251, 1361, 1440
SduI GDGCHC 5 cut(s) 519, 570, 870, 900, 1167
SfaNI GCATC 3 cut(s) 490, 1180, 1386
SfcI CTRYAG 2 cut(s) 544, 559
Sfr303I CCGCGG 1 cut(s) 1089
SgrBI CCGCGG 1 cut(s) 1089
SinI GGWCC 4 cut(s) 75, 113, 209, 296
SmiMI CAYNNNNRTG 2 cut(s) 227, 647
SmlI CTYRAG 3 cut(s) 497, 632, 1499
SmoI CTYRAG 3 cut(s) 497, 632, 1499
SnaBI TACGTA 1 cut(s) 197
SphI GCATGC 1 cut(s) 226
Sse9I AATT 1 cut(s) 973
SseBI AGGCCT 2 cut(s) 282, 1418
SspMI CTAG 2 cut(s) 1404, 1518
SstI GAGCTC 2 cut(s) 900, 1167
StuI AGGCCT 2 cut(s) 282, 1418
StyD4I CCNGG 9 cut(s) 109, 118, 437, 868, 929, 987, 1249, 1359, 1438
StyI CCWWGG 1 cut(s) 1517
TaaI ACNGT 2 cut(s) 171, 1480
TaiI ACGT 6 cut(s) 24, 166, 199, 1065, 1299, 1373
TaqI TCGA 5 cut(s) 159, 166, 786, 843, 950
TasI AATT 1 cut(s) 973
TauI GCSGC 6 cut(s) 90, 315, 408, 682, 1148, 1351
TfiI GAWTC 1 cut(s) 609
Tru1I TTAA 2 cut(s) 972, 1095
Tru9I TTAA 2 cut(s) 972, 1095
TscAI CASTG 2 cut(s) 455, 1216
TseFI GTSAC 4 cut(s) 79, 415, 1048, 1219
TseI GCWGC 4 cut(s) 453, 561, 682, 833
Tsp45I GTSAC 4 cut(s) 79, 415, 1048, 1219
TspDTI ATGAA 6 cut(s) 16, 17, 163, 503, 998, 1502
TspRI CASTG 2 cut(s) 455, 1216
VpaK11BI GGWCC 4 cut(s) 75, 113, 209, 296
XceI RCATGY 1 cut(s) 226
XmaJI CCTAGG 1 cut(s) 1517
XmiI GTMKAC 2 cut(s) 166, 628
XspI CTAG 2 cut(s) 1404, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.