Rorug04G0181200

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000136
Physical Location & Seq
Reverse (-)
31698397 .. 31703397
5001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0181200.1

Sequence Viewer

Length: 1233 bp
ATGGTAGGTCCGGTGGGGGAGGCAAGAAGGGGTGGACATGACTGTGTGGTTGGGTTGGACTGTTTTCTGGACATCGTCAGGGCTTTAGGGATGGGCTCGTGCCTCTCCATCACCGGTGACAACGCCCCCGGCTACGGCCGGGTGTCTTCCCCGGCGCAGAGCAACAAGAGGAGGAGGAGGTTGACCGGCAACTCGTCGTCACCGGTTTCGTCGGCGGCGGCGAGTTCCATGGAGATGTGGCTGCACAGGGTTCCGGGGAGGTTGTTCCTGAATGGCTTCTCTGATGTGGCTTCCCTGTTCAGCAAGCAAGGCAAGAAAGGTGTCAATCAGGACGCTATGATTGCTTGGGAGAATTTCGGCTCCAAGGAAGATACAATATTCTGTGGTGTTTTTGATGGGCATGGTCCTAGTGGCCATATGGTGGCGAAGAAGGTGAGGGATTCTCTACCTTTGAAGGTCAGCTCACAATGGGTGTTGAACACCAGCGCCGCCGATACTAACCACGCCGGTGCATCTGTGGAGAGCAAGGACAGCCATGGTGAATTTTTCGCCACATTGAAAGATTCGTTTTTGAAGGCTTTTAAGGTCATGGACAAGGAGCTTAAGTTGCATCCTCGTATTGATTGCTATTGCAGTGGGACAACTGCAGTTACGTTGGTCAAGCAGGGTCAGGATCTTATTATTGCAAATATTGGGGACTCTAGAGCTGTGCTAGGCACAAGAGATGAAGGGGGTTCTCTCGTTGCAGTTCAGTTGACTGTAGACTTAAAACCAAATCTTCCAAGGGAAGCCGAGAGGATTACGTTATGTAAAGGTCGAGTATTTGCTCTCCACAACGAGCCTGATGTCACTCGAGTTTGGTTGCCCAACAGTAATTCACCTGGGCTTGCTATGGCCCGGGCTTTTGGAGATTTCTGCCTAAAGGATTATGGTTTAATCTCTGTCCCTGATGTTTCTTATCGTCGCCTTACTGAGAAGGATGAATTTGTAGTACTGGCTACAGATGGGATCTGGGATGTTCTCTCAAACAAAGAAGTTGTGGATATAGTGGCAGCAACCCCACGACCCTCTGCTGCTCGAGCCCTGGTGGAGTCAGCCAATCGAGCTTGGAGATTTAAACACCCATATGCCAAGGTTGATGATTGTGCCGTTGTTTGCCTCTTCCTCACTTCCGGTGCTTCAGACAATACTTCCCTTTCCTCACCAGAGGAGAAGAAAGTGAACTCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

410

Amino Acids

44.24

Weight (kDa)

8.27

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 103 - 353 1.8e-42 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 421
AccI GTMKAC 1 cut(s) 762
AciI CCGC 3 cut(s) 215, 218, 489
AclWI GGATC 2 cut(s) 681, 1016
AcoI YGGCCR 2 cut(s) 136, 412
AcsI RAATTY 3 cut(s) 352, 542, 983
AcuI CTGAAG 1 cut(s) 1164
AfaI GTAC 1 cut(s) 993
AfiI CCNNNNNNNGG 2 cut(s) 134, 421
AflII CTTAAG 1 cut(s) 602
AgeI ACCGGT 2 cut(s) 113, 202
AgsI TTSAA 4 cut(s) 454, 478, 559, 574
AjnI CCWGG 2 cut(s) 880, 1083
AleI CACNNNNGTG 1 cut(s) 507
AluBI AGCT 4 cut(s) 462, 601, 707, 1106
AluI AGCT 4 cut(s) 462, 601, 707, 1106
AlwI GGATC 2 cut(s) 681, 1016
Ama87I CYCGRG 3 cut(s) 852, 897, 1077
AoxI GGCC 3 cut(s) 136, 412, 894
ApeKI GCWGC 3 cut(s) 241, 1052, 1073
ApoI RAATTY 3 cut(s) 352, 542, 983
AsiGI ACCGGT 2 cut(s) 113, 202
Asp700I GAANNNNTTC 1 cut(s) 275
AspLEI GCGC 2 cut(s) 157, 488
AspS9I GGNCC 3 cut(s) 8, 404, 895
AsuC2I CCSGG 6 cut(s) 129, 140, 152, 255, 898, 899
AsuHPI GGTGA 7 cut(s) 103, 128, 192, 445, 551, 870, 1194
AvaI CYCGRG 3 cut(s) 852, 897, 1077
AvaII GGWCC 2 cut(s) 8, 404
BalI TGGCCA 1 cut(s) 414
BanII GRGCYC 2 cut(s) 98, 1084
BauI CACGAG 1 cut(s) 97
BbsI GAAGAC 1 cut(s) 138
BbvI GCAGC 3 cut(s) 228, 1060, 1064
BccI CCATC 4 cut(s) 85, 116, 389, 998
BceAI ACGGC 2 cut(s) 151, 1133
BciT130I CCWGG 2 cut(s) 882, 1085
BcnI CCSGG 6 cut(s) 129, 140, 152, 255, 898, 899
BfaI CTAG 3 cut(s) 408, 702, 713
BfmI CTRYAG 3 cut(s) 645, 759, 999
BfoI RGCGCY 1 cut(s) 489
BfrI CTTAAG 1 cut(s) 602
BisI GCNGC 6 cut(s) 216, 219, 242, 489, 1053, 1074
BlsI GCNGC 6 cut(s) 217, 220, 243, 490, 1054, 1075
BmcAI AGTACT 1 cut(s) 993
Bme1390I CCNGG 8 cut(s) 129, 140, 152, 255, 882, 898, 899, 1085
Bme18I GGWCC 2 cut(s) 8, 404
BmeT110I CYCGRG 3 cut(s) 852, 897, 1077
BmgT120I GGNCC 3 cut(s) 8, 404, 895
BmiI GGNNCC 2 cut(s) 252, 361
BmrFI CCNGG 8 cut(s) 129, 140, 152, 255, 882, 898, 899, 1085
BmsI GCATC 2 cut(s) 521, 619
BpiI GAAGAC 1 cut(s) 138
BplI GAGNNNNNCTC 2 cut(s) 427, 459
BpuMI CCSGG 6 cut(s) 129, 140, 152, 255, 898, 899
BsaWI WCCGGW 4 cut(s) 10, 113, 202, 1172
BsaXI ACNNNNNCTCC 2 cut(s) 590, 620
Bsc4I CCNNNNNNNGG 2 cut(s) 134, 421
Bse118I RCCGGY 4 cut(s) 113, 185, 202, 506
Bse1I ACTGG 1 cut(s) 999
BseBI CCWGG 2 cut(s) 882, 1085
BseGI GGATG 4 cut(s) 96, 610, 985, 1021
BseLI CCNNNNNNNGG 2 cut(s) 134, 421
BseMII CTCAG 1 cut(s) 963
BseNI ACTGG 1 cut(s) 999
BseRI GAGGAG 4 cut(s) 184, 187, 190, 1223
BseX3I CGGCCG 1 cut(s) 136
BseXI GCAGC 3 cut(s) 228, 1060, 1064
BsgI GTGCAG 1 cut(s) 227
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 3 cut(s) 138, 414, 896
BshTI ACCGGT 2 cut(s) 113, 202
BsiEI CGRYCG 1 cut(s) 139
BsiHKCI CYCGRG 3 cut(s) 852, 897, 1077
BslFI GGGAC 3 cut(s) 652, 710, 929
BslI CCNNNNNNNGG 2 cut(s) 134, 421
BsmFI GGGAC 3 cut(s) 652, 710, 929
BsnI GGCC 3 cut(s) 138, 414, 896
BsoBI CYCGRG 3 cut(s) 852, 897, 1077
Bsp1286I GDGCHC 2 cut(s) 98, 1084
Bsp143I GATC 2 cut(s) 673, 1008
Bsp19I CCATGG 2 cut(s) 228, 535
BspACI CCGC 3 cut(s) 215, 218, 489
BspANI GGCC 3 cut(s) 138, 414, 896
BspCNI CTCAG 1 cut(s) 964
BspLI GGNNCC 2 cut(s) 252, 361
BspMAI CTGCAG 1 cut(s) 649
BspPI GGATC 2 cut(s) 681, 1016
BspTI CTTAAG 1 cut(s) 602
BsrFI RCCGGY 4 cut(s) 113, 185, 202, 506
BsrI ACTGG 1 cut(s) 999
BssAI RCCGGY 4 cut(s) 113, 185, 202, 506
BssMI GATC 2 cut(s) 673, 1008
BssSI CACGAG 1 cut(s) 97
BssT1I CCWWGG 5 cut(s) 228, 363, 535, 782, 1131
Bst2BI CACGAG 1 cut(s) 97
Bst2UI CCWGG 2 cut(s) 882, 1085
Bst4CI ACNGT 4 cut(s) 44, 62, 760, 872
Bst6I CTCTTC 1 cut(s) 1166
BstAFI CTTAAG 1 cut(s) 602
BstC8I GCNNGC 2 cut(s) 305, 888
BstDEI CTNAG 1 cut(s) 972
BstDSI CCRYGG 2 cut(s) 228, 535
BstF5I GGATG 4 cut(s) 96, 610, 985, 1021
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 2 cut(s) 157, 488
BstKTI GATC 2 cut(s) 676, 1011
BstMBI GATC 2 cut(s) 673, 1008
BstMCI CGRYCG 1 cut(s) 139
BstMWI GCNNNNNNNGC 6 cut(s) 309, 341, 531, 607, 1079, 1103
BstNI CCWGG 2 cut(s) 882, 1085
BstSCI CCNGG 8 cut(s) 127, 138, 150, 253, 880, 896, 897, 1083
BstSFI CTRYAG 3 cut(s) 645, 759, 999
BstV1I GCAGC 3 cut(s) 228, 1060, 1064
BstV2I GAAGAC 1 cut(s) 138
BstX2I RGATCY 2 cut(s) 673, 1008
BstYI RGATCY 2 cut(s) 673, 1008
BstZI CGGCCG 1 cut(s) 136
BsuRI GGCC 3 cut(s) 138, 414, 896
BtgI CCRYGG 2 cut(s) 228, 535
BtsCI GGATG 4 cut(s) 96, 610, 985, 1021
BtsI GCAGTG 1 cut(s) 640
BtsIMutI CAGTG 1 cut(s) 640
Cac8I GCNNGC 2 cut(s) 305, 888
CfoI GCGC 2 cut(s) 157, 488
Cfr10I RCCGGY 4 cut(s) 113, 185, 202, 506
Cfr13I GGNCC 3 cut(s) 8, 404, 895
Cfr9I CCCGGG 1 cut(s) 897
CseI GACGC 1 cut(s) 341
Csp6I GTAC 1 cut(s) 992
CspAI ACCGGT 2 cut(s) 113, 202
CviAII CATG 5 cut(s) 38, 229, 401, 536, 589
CviQI GTAC 1 cut(s) 992
DdeI CTNAG 1 cut(s) 972
DpnI GATC 2 cut(s) 675, 1010
DpnII GATC 2 cut(s) 673, 1008
DraI TTTAAA 1 cut(s) 1117
EaeI YGGCCR 2 cut(s) 136, 412
EagI CGGCCG 1 cut(s) 136
Eam1104I CTCTTC 1 cut(s) 1166
EarI CTCTTC 1 cut(s) 1166
EclXI CGGCCG 1 cut(s) 136
Eco130I CCWWGG 5 cut(s) 228, 363, 535, 782, 1131
Eco24I GRGCYC 2 cut(s) 98, 1084
Eco47I GGWCC 2 cut(s) 8, 404
Eco52I CGGCCG 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 1164
Eco88I CYCGRG 3 cut(s) 852, 897, 1077
EcoRII CCWGG 2 cut(s) 880, 1083
EcoT14I CCWWGG 5 cut(s) 228, 363, 535, 782, 1131
EcoT38I GRGCYC 2 cut(s) 98, 1084
ErhI CCWWGG 5 cut(s) 228, 363, 535, 782, 1131
FaeI CATG 5 cut(s) 41, 232, 404, 539, 592
FaqI GGGAC 3 cut(s) 652, 710, 929
FatI CATG 5 cut(s) 37, 228, 400, 535, 588
FauNDI CATATG 2 cut(s) 417, 1126
FblI GTMKAC 1 cut(s) 762
Fnu4HI GCNGC 6 cut(s) 216, 219, 242, 489, 1053, 1074
FokI GGATG 4 cut(s) 103, 597, 992, 1028
FriOI GRGCYC 2 cut(s) 98, 1084
Fsp4HI GCNGC 6 cut(s) 216, 219, 242, 489, 1053, 1074
FspBI CTAG 3 cut(s) 408, 702, 713
GlaI GCGC 2 cut(s) 156, 487
GluI GCNGC 6 cut(s) 216, 219, 242, 489, 1053, 1074
HaeII RGCGCY 1 cut(s) 489
HaeIII GGCC 3 cut(s) 138, 414, 896
HgaI GACGC 1 cut(s) 341
HhaI GCGC 2 cut(s) 157, 488
Hin1II CATG 5 cut(s) 41, 232, 404, 539, 592
Hin6I GCGC 2 cut(s) 155, 486
HinP1I GCGC 2 cut(s) 155, 486
HincII GTYRAC 2 cut(s) 183, 756
HindII GTYRAC 2 cut(s) 183, 756
HinfI GANTC 4 cut(s) 440, 563, 698, 1091
HphI GGTGA 7 cut(s) 103, 128, 192, 445, 551, 870, 1194
Hpy166II GTNNAC 5 cut(s) 35, 183, 756, 763, 1222
Hpy188I TCNGA 2 cut(s) 283, 1183
Hpy188III TCNNGA 5 cut(s) 68, 268, 329, 671, 702
Hpy8I GTNNAC 5 cut(s) 35, 183, 756, 763, 1222
Hpy99I CGWCG 3 cut(s) 199, 214, 966
HpyAV CCTTC 6 cut(s) 21, 424, 448, 568, 722, 970
HpyCH4III ACNGT 4 cut(s) 44, 62, 760, 872
HpyCH4IV ACGT 2 cut(s) 653, 803
HpyCH4V TGCA 7 cut(s) 244, 512, 610, 633, 647, 686, 746
HpyF10VI GCNNNNNNNGC 6 cut(s) 309, 341, 531, 607, 1079, 1103
HpyF3I CTNAG 1 cut(s) 972
HpySE526I ACGT 2 cut(s) 653, 803
Hsp92II CATG 5 cut(s) 41, 232, 404, 539, 592
HspAI GCGC 2 cut(s) 155, 486
Kzo9I GATC 2 cut(s) 673, 1008
LmnI GCTCC 2 cut(s) 365, 598
Lsp1109I GCAGC 3 cut(s) 228, 1060, 1064
LweI GCATC 2 cut(s) 521, 619
MaeI CTAG 3 cut(s) 408, 702, 713
MaeII ACGT 2 cut(s) 653, 803
MaeIII GTNAC 4 cut(s) 116, 198, 649, 847
MalI GATC 2 cut(s) 675, 1010
MboI GATC 2 cut(s) 673, 1008
MboII GAAGA 6 cut(s) 138, 380, 439, 770, 1153, 1225
MflI RGATCY 2 cut(s) 673, 1008
MhlI GDGCHC 2 cut(s) 98, 1084
MlsI TGGCCA 1 cut(s) 414
MluCI AATT 4 cut(s) 352, 542, 874, 983
MluNI TGGCCA 1 cut(s) 414
MlyI GAGTC 2 cut(s) 692, 1100
MmeI TCCRAC 1 cut(s) 36
Mox20I TGGCCA 1 cut(s) 414
MroXI GAANNNNTTC 1 cut(s) 275
MscI TGGCCA 1 cut(s) 414
MseI TTAA 5 cut(s) 582, 603, 767, 935, 1116
MslI CAYNNNNRTG 4 cut(s) 42, 233, 507, 1125
Msp20I TGGCCA 1 cut(s) 414
MspCI CTTAAG 1 cut(s) 602
MspR9I CCNGG 8 cut(s) 129, 140, 152, 255, 882, 898, 899, 1085
MvaI CCWGG 2 cut(s) 882, 1085
MwoI GCNNNNNNNGC 6 cut(s) 309, 341, 531, 607, 1079, 1103
NciI CCSGG 6 cut(s) 129, 140, 152, 255, 898, 899
NcoI CCATGG 2 cut(s) 228, 535
NdeI CATATG 2 cut(s) 417, 1126
NdeII GATC 2 cut(s) 673, 1008
NlaIII CATG 5 cut(s) 41, 232, 404, 539, 592
NlaIV GGNNCC 2 cut(s) 252, 361
NmeAIII GCCGAG 1 cut(s) 817
NmuCI GTSAC 3 cut(s) 116, 198, 847
OliI CACNNNNGTG 1 cut(s) 507
PaeR7I CTCGAG 2 cut(s) 852, 1077
PcsI WCGNNNNNNNCGW 1 cut(s) 218
PdmI GAANNNNTTC 1 cut(s) 275
PfeI GAWTC 2 cut(s) 440, 563
PflFI GACNNNGTC 1 cut(s) 74
PflMI CCANNNNNTGG 1 cut(s) 421
PinAI ACCGGT 2 cut(s) 113, 202
PkrI GCNGC 6 cut(s) 217, 220, 243, 490, 1054, 1075
PleI GAGTC 2 cut(s) 692, 1099
PpsI GAGTC 2 cut(s) 692, 1099
Psp6I CCWGG 2 cut(s) 880, 1083
PspGI CCWGG 2 cut(s) 880, 1083
PspN4I GGNNCC 2 cut(s) 252, 361
PspPI GGNCC 3 cut(s) 8, 404, 895
PspXI VCTCGAGB 2 cut(s) 852, 1077
PstI CTGCAG 1 cut(s) 649
PsuI RGATCY 2 cut(s) 673, 1008
PsyI GACNNNGTC 1 cut(s) 74
RsaI GTAC 1 cut(s) 993
RsaNI GTAC 1 cut(s) 992
RseI CAYNNNNRTG 4 cut(s) 42, 233, 507, 1125
SaqAI TTAA 5 cut(s) 582, 603, 767, 935, 1116
SatI GCNGC 6 cut(s) 216, 219, 242, 489, 1053, 1074
Sau3AI GATC 2 cut(s) 673, 1008
Sau96I GGNCC 3 cut(s) 8, 404, 895
ScaI AGTACT 1 cut(s) 993
SchI GAGTC 2 cut(s) 692, 1100
ScrFI CCNGG 8 cut(s) 129, 140, 152, 255, 882, 898, 899, 1085
SduI GDGCHC 2 cut(s) 98, 1084
SfaNI GCATC 2 cut(s) 521, 619
SfcI CTRYAG 3 cut(s) 645, 759, 999
Sfr274I CTCGAG 2 cut(s) 852, 1077
SgrAI CRCCGGYG 2 cut(s) 113, 506
SinI GGWCC 2 cut(s) 8, 404
SlaI CTCGAG 2 cut(s) 852, 1077
SmaI CCCGGG 1 cut(s) 899
SmiMI CAYNNNNRTG 4 cut(s) 42, 233, 507, 1125
SmlI CTYRAG 3 cut(s) 602, 852, 1077
SmoI CTYRAG 3 cut(s) 602, 852, 1077
SrfI GCCCGGGC 1 cut(s) 899
Sse9I AATT 4 cut(s) 352, 542, 874, 983
SsiI CCGC 3 cut(s) 215, 218, 489
SspI AATATT 2 cut(s) 378, 691
SspMI CTAG 3 cut(s) 408, 702, 713
StyD4I CCNGG 8 cut(s) 127, 138, 150, 253, 880, 896, 897, 1083
StyI CCWWGG 5 cut(s) 228, 363, 535, 782, 1131
TaaI ACNGT 4 cut(s) 44, 62, 760, 872
TaiI ACGT 2 cut(s) 656, 806
TaqI TCGA 4 cut(s) 817, 853, 1078, 1102
TasI AATT 4 cut(s) 352, 542, 874, 983
TatI WGTACW 1 cut(s) 991
TauI GCSGC 3 cut(s) 218, 221, 491
TfiI GAWTC 2 cut(s) 440, 563
Tru1I TTAA 5 cut(s) 582, 603, 767, 935, 1116
Tru9I TTAA 5 cut(s) 582, 603, 767, 935, 1116
TscAI CASTG 1 cut(s) 640
TseFI GTSAC 3 cut(s) 116, 198, 847
TseI GCWGC 3 cut(s) 241, 1052, 1073
Tsp45I GTSAC 3 cut(s) 116, 198, 847
TspDTI ATGAA 2 cut(s) 741, 996
TspMI CCCGGG 1 cut(s) 897
TspRI CASTG 1 cut(s) 640
Tth111I GACNNNGTC 1 cut(s) 74
Van91I CCANNNNNTGG 1 cut(s) 421
Vha464I CTTAAG 1 cut(s) 602
VpaK11BI GGWCC 2 cut(s) 8, 404
XapI RAATTY 3 cut(s) 352, 542, 983
XbaI TCTAGA 1 cut(s) 701
XhoI CTCGAG 2 cut(s) 852, 1077
XmaI CCCGGG 1 cut(s) 897
XmiI GTMKAC 1 cut(s) 762
XmnI GAANNNNTTC 1 cut(s) 275
XspI CTAG 3 cut(s) 408, 702, 713
ZrmI AGTACT 1 cut(s) 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.