Rorug05G0407700

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000136
Physical Location & Seq
Forward (+)
56203503 .. 56204518
1016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0407700.1

Sequence Viewer

Length: 954 bp
ATGACGAGGAACTCTCCTTCATCACCCCCTCCGAAATCGCCGCCGAATTCTCCCACCACGACCCCACCCTTCGGGTCCTGCCCCGACTCCGTCCTCCAGGCCCAGCGCGGCTGGCAGCTCAAGTACCTCTCCCAGCCTGATCACTTCTACTTCAACCACCTCCAAACCGGCATCCTCCACTCCCGCACCCTCATCAAGGACCTCATCAACGCCGACCACGTCGAGGAGGTCTCCATCGTCGACAACGCCACCACCACCGCCGCCATCGTCCTCCAGCAGGCCGCCTGGGGCTTCTCCGAGAGCAAATTCGAGCAGGGCGACGCCGTCGTCATGCTCCATTACGCCTACGGCGCCGTCAAGAAGTCGATTGAGGCCTACGTCACTCGCGCCGGCGGGCACGTCATTGAGGTACCCTTGCCGTTTCCTTTGAATTCCAACGATGAGATTGTAACCGAGTTTAAGAAAGCTTTGGAGAAGGGGAAGGCTAATGGTAGGAGGGTTAGGTTAGCTGTGATTGATCATATTACTTCAATGCCGTGTGTGGTTATACCTGTTAAGGAGTTGGTTAGGATTTGTAGGGAGGAGGGGGTTGATCAGGTTTTCGTCGATGCGGCTCACAGCATTGGGTGCACTGAGGTTGATATGAAGGAGATTGGGGCTGATTATTATACTAGTAATTTACACAAGTGGTTCTTTTGCCCGCCGTCGATTGCGTTTTTGTATTGTAGGAAGTCGCCCAAGGGTGTGGAATTGCACCACCCGGTGGTTTCGCATGAGTATGAGAATGGATTGGCTATTGAAAGTGCTTGGATTGGGACTAGGGATTACAGCCCTCAGTTGGTTGTTCCGGCGGTTTTGGACTTTGTCAATAGGTTTGAAGGCGGAATTGAGGGGATCAGGAAGAGAAATCATGAGACTGTTGTTGAGATGGGGCAGATGTTGGCGGAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

317

Amino Acids

35.29

Weight (kDa)

6.11

Isoelectric Point (pI)

51.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_5 PF00266 30 - 247 8.1e-16 Aminotransferase class-V
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 326
Acc65I GGTACC 1 cut(s) 409
AccB1I GGYRCC 2 cut(s) 350, 409
AccB7I CCANNNNNTGG 1 cut(s) 763
AccI GTMKAC 1 cut(s) 240
AccII CGCG 2 cut(s) 108, 387
AclWI GGATC 1 cut(s) 902
AcsI RAATTY 3 cut(s) 46, 305, 430
AcyI GRCGYC 2 cut(s) 321, 351
AdeI CACNNNGTG 1 cut(s) 763
AfaI GTAC 2 cut(s) 125, 411
AfiI CCNNNNNNNGG 6 cut(s) 71, 196, 223, 277, 763, 838
AgsI TTSAA 5 cut(s) 154, 430, 531, 800, 878
AhlI ACTAGT 1 cut(s) 671
AjiI CACGTC 2 cut(s) 220, 400
AjnI CCWGG 2 cut(s) 96, 284
AluBI AGCT 3 cut(s) 118, 467, 509
AluI AGCT 3 cut(s) 118, 467, 509
Alw21I GWGCWC 1 cut(s) 632
Alw26I GTCTC 2 cut(s) 235, 908
Alw44I GTGCAC 1 cut(s) 628
AlwI GGATC 1 cut(s) 902
AoxI GGCC 3 cut(s) 99, 279, 372
ApaLI GTGCAC 1 cut(s) 628
ApeKI GCWGC 1 cut(s) 115
ApoI RAATTY 3 cut(s) 46, 305, 430
Asp718I GGTACC 1 cut(s) 409
AspLEI GCGC 3 cut(s) 108, 353, 389
AspS9I GGNCC 3 cut(s) 75, 100, 199
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 1 cut(s) 15
AvaII GGWCC 2 cut(s) 75, 199
BaeGI GKGCMC 2 cut(s) 399, 632
BanI GGYRCC 2 cut(s) 350, 409
Bbv12I GWGCWC 1 cut(s) 632
BbvI GCAGC 1 cut(s) 127
BccI CCATC 3 cut(s) 242, 272, 922
BceAI ACGGC 6 cut(s) 308, 338, 364, 403, 520, 688
BciT130I CCWGG 2 cut(s) 98, 286
BclI TGATCA 3 cut(s) 139, 517, 592
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 2 cut(s) 235, 908
BcuI ACTAGT 1 cut(s) 671
BfaI CTAG 2 cut(s) 672, 819
BfoI RGCGCY 1 cut(s) 354
BisI GCNGC 6 cut(s) 41, 109, 116, 261, 282, 612
BlsI GCNGC 6 cut(s) 42, 110, 117, 262, 283, 613
Bme1390I CCNGG 3 cut(s) 98, 286, 761
Bme18I GGWCC 2 cut(s) 75, 199
BmgBI CACGTC 2 cut(s) 220, 400
BmgT120I GGNCC 3 cut(s) 75, 100, 199
BmiI GGNNCC 3 cut(s) 76, 352, 411
BmrFI CCNGG 3 cut(s) 98, 286, 761
BmsI GCATC 2 cut(s) 180, 598
BplI GAGNNNNNCTC 3 cut(s) 30, 215, 247
BpmI CTGGAG 2 cut(s) 80, 257
BpuEI CTTGAG 1 cut(s) 104
BpuMI CCSGG 1 cut(s) 761
BsaHI GRCGYC 2 cut(s) 321, 351
BsaI GGTCTC 1 cut(s) 235
BsaJI CCNNGG 2 cut(s) 285, 738
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 196, 223, 277, 763, 838
Bse118I RCCGGY 2 cut(s) 167, 389
BseBI CCWGG 2 cut(s) 98, 286
BseDI CCNNGG 2 cut(s) 285, 738
BseGI GGATG 1 cut(s) 171
BseLI CCNNNNNNNGG 6 cut(s) 71, 196, 223, 277, 763, 838
BseMII CTCAG 2 cut(s) 624, 848
BseRI GAGGAG 2 cut(s) 239, 596
BseSI GKGCMC 2 cut(s) 399, 632
BseXI GCAGC 1 cut(s) 127
BseYI CCCAGC 2 cut(s) 102, 132
Bsh1236I CGCG 2 cut(s) 108, 387
BshFI GGCC 3 cut(s) 101, 281, 374
BshNI GGYRCC 2 cut(s) 350, 409
BsiHKAI GWGCWC 1 cut(s) 632
BsiSI CCGG 4 cut(s) 168, 390, 761, 848
BslFI GGGAC 1 cut(s) 829
BslI CCNNNNNNNGG 6 cut(s) 71, 196, 223, 277, 763, 838
BsmAI GTCTC 2 cut(s) 235, 908
BsmFI GGGAC 1 cut(s) 829
BsnI GGCC 3 cut(s) 101, 281, 374
Bso31I GGTCTC 1 cut(s) 235
Bsp1286I GDGCHC 2 cut(s) 399, 632
Bsp143I GATC 4 cut(s) 139, 517, 592, 894
BspANI GGCC 3 cut(s) 101, 281, 374
BspCNI CTCAG 2 cut(s) 625, 847
BspFNI CGCG 2 cut(s) 108, 387
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 3 cut(s) 76, 352, 411
BspPI GGATC 1 cut(s) 902
BspT107I GGYRCC 2 cut(s) 350, 409
BspTNI GGTCTC 1 cut(s) 235
BsrFI RCCGGY 2 cut(s) 167, 389
BssAI RCCGGY 2 cut(s) 167, 389
BssECI CCNNGG 2 cut(s) 285, 738
BssMI GATC 4 cut(s) 139, 517, 592, 894
BssNI GRCGYC 2 cut(s) 321, 351
BssT1I CCWWGG 1 cut(s) 738
Bst2UI CCWGG 2 cut(s) 98, 286
Bst4CI ACNGT 1 cut(s) 919
Bst6I CTCTTC 1 cut(s) 896
BstACI GRCGYC 2 cut(s) 321, 351
BstAPI GCANNNNNTGC 1 cut(s) 627
BstC8I GCNNGC 5 cut(s) 113, 279, 391, 395, 701
BstDEI CTNAG 2 cut(s) 633, 834
BstENI CCTNNNNNAGG 2 cut(s) 194, 275
BstF5I GGATG 1 cut(s) 171
BstFNI CGCG 2 cut(s) 108, 387
BstH2I RGCGCY 1 cut(s) 354
BstHHI GCGC 3 cut(s) 108, 353, 389
BstKTI GATC 4 cut(s) 142, 520, 595, 897
BstMAI GTCTC 2 cut(s) 235, 908
BstMBI GATC 4 cut(s) 139, 517, 592, 894
BstMWI GCNNNNNNNGC 3 cut(s) 112, 350, 627
BstNI CCWGG 2 cut(s) 98, 286
BstSCI CCNGG 3 cut(s) 96, 284, 759
BstSLI GKGCMC 2 cut(s) 399, 632
BstUI CGCG 2 cut(s) 108, 387
BstV1I GCAGC 1 cut(s) 127
BstXI CCANNNNNNTGG 1 cut(s) 745
BsuRI GGCC 3 cut(s) 101, 281, 374
BtrI CACGTC 2 cut(s) 220, 400
BtsCI GGATG 1 cut(s) 171
BtsIMutI CAGTG 1 cut(s) 630
Cac8I GCNNGC 5 cut(s) 113, 279, 391, 395, 701
CciI TCATGA 1 cut(s) 910
CfoI GCGC 3 cut(s) 108, 353, 389
Cfr10I RCCGGY 2 cut(s) 167, 389
Cfr13I GGNCC 3 cut(s) 75, 100, 199
CseI GACGC 1 cut(s) 329
Csp6I GTAC 2 cut(s) 124, 410
CviAII CATG 3 cut(s) 331, 773, 911
CviQI GTAC 2 cut(s) 124, 410
DdeI CTNAG 2 cut(s) 633, 834
DinI GGCGCC 1 cut(s) 352
DpnI GATC 4 cut(s) 141, 519, 594, 896
DpnII GATC 4 cut(s) 139, 517, 592, 894
DraIII CACNNNGTG 1 cut(s) 763
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
Eam1104I CTCTTC 1 cut(s) 896
EarI CTCTTC 1 cut(s) 896
EciI GGCGGA 1 cut(s) 897
Eco130I CCWWGG 1 cut(s) 738
Eco147I AGGCCT 1 cut(s) 374
Eco31I GGTCTC 1 cut(s) 235
Eco47I GGWCC 2 cut(s) 75, 199
EcoNI CCTNNNNNAGG 2 cut(s) 194, 275
EcoO109I RGGNCCY 2 cut(s) 75, 199
EcoRI GAATTC 2 cut(s) 46, 430
EcoRII CCWGG 2 cut(s) 96, 284
EcoT14I CCWWGG 1 cut(s) 738
EgeI GGCGCC 1 cut(s) 352
EheI GGCGCC 1 cut(s) 352
ErhI CCWWGG 1 cut(s) 738
FaeI CATG 3 cut(s) 334, 776, 914
FaiI YATR 8 cut(s) 332, 522, 548, 644, 669, 774, 780, 912
FalI AAGNNNNNCTT 2 cut(s) 677, 709
FaqI GGGAC 1 cut(s) 829
FatI CATG 3 cut(s) 330, 772, 910
FauI CCCGC 3 cut(s) 191, 386, 708
FbaI TGATCA 3 cut(s) 139, 517, 592
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 6 cut(s) 41, 109, 116, 261, 282, 612
FokI GGATG 1 cut(s) 158
Fsp4HI GCNGC 6 cut(s) 41, 109, 116, 261, 282, 612
FspBI CTAG 2 cut(s) 672, 819
GlaI GCGC 3 cut(s) 107, 352, 388
GluI GCNGC 6 cut(s) 41, 109, 116, 261, 282, 612
GsaI CCCAGC 2 cut(s) 106, 136
GsuI CTGGAG 2 cut(s) 80, 257
HaeII RGCGCY 1 cut(s) 354
HaeIII GGCC 3 cut(s) 101, 281, 374
HapII CCGG 4 cut(s) 168, 390, 761, 848
HgaI GACGC 1 cut(s) 329
HhaI GCGC 3 cut(s) 108, 353, 389
Hin1I GRCGYC 2 cut(s) 321, 351
Hin1II CATG 3 cut(s) 334, 776, 914
Hin6I GCGC 3 cut(s) 106, 351, 387
HinP1I GCGC 3 cut(s) 106, 351, 387
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HindIII AAGCTT 1 cut(s) 465
HinfI GANTC 1 cut(s) 86
HpaII CCGG 4 cut(s) 168, 390, 761, 848
HphI GGTGA 1 cut(s) 15
Hpy166II GTNNAC 2 cut(s) 241, 630
Hpy188I TCNGA 2 cut(s) 33, 298
Hpy188III TCNNGA 3 cut(s) 358, 898, 911
Hpy8I GTNNAC 2 cut(s) 241, 630
Hpy99I CGWCG 6 cut(s) 224, 242, 323, 329, 608, 709
HpyAV CCTTC 6 cut(s) 27, 79, 469, 475, 640, 872
HpyCH4III ACNGT 1 cut(s) 919
HpyCH4IV ACGT 3 cut(s) 219, 378, 399
HpyCH4V TGCA 2 cut(s) 630, 754
HpyF10VI GCNNNNNNNGC 3 cut(s) 112, 350, 627
HpyF3I CTNAG 2 cut(s) 633, 834
HpySE526I ACGT 3 cut(s) 219, 378, 399
Hsp92I GRCGYC 2 cut(s) 321, 351
Hsp92II CATG 3 cut(s) 334, 776, 914
HspAI GCGC 3 cut(s) 106, 351, 387
KasI GGCGCC 1 cut(s) 350
KpnI GGTACC 1 cut(s) 413
KroI GCCGGC 1 cut(s) 389
KroNI GCCGGC 1 cut(s) 391
Ksp22I TGATCA 3 cut(s) 139, 517, 592
Kzo9I GATC 4 cut(s) 139, 517, 592, 894
LmnI GCTCC 2 cut(s) 339, 946
Lsp1109I GCAGC 1 cut(s) 127
LweI GCATC 2 cut(s) 180, 598
MaeI CTAG 2 cut(s) 672, 819
MaeII ACGT 3 cut(s) 219, 378, 399
MaeIII GTNAC 2 cut(s) 379, 448
MalI GATC 4 cut(s) 141, 519, 594, 896
MboI GATC 4 cut(s) 139, 517, 592, 894
MboII GAAGA 1 cut(s) 913
MhlI GDGCHC 2 cut(s) 399, 632
MluCI AATT 6 cut(s) 46, 305, 430, 676, 749, 885
Mly113I GGCGCC 1 cut(s) 351
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 1 cut(s) 459
MreI CGCCGGCG 1 cut(s) 389
MroNI GCCGGC 1 cut(s) 389
MseI TTAA 2 cut(s) 459, 555
MslI CAYNNNNRTG 1 cut(s) 777
MspI CCGG 4 cut(s) 168, 390, 761, 848
MspR9I CCNGG 3 cut(s) 98, 286, 761
MvaI CCWGG 2 cut(s) 98, 286
MvnI CGCG 2 cut(s) 108, 387
MwoI GCNNNNNNNGC 3 cut(s) 112, 350, 627
NaeI GCCGGC 1 cut(s) 391
NarI GGCGCC 1 cut(s) 351
NciI CCSGG 1 cut(s) 761
NdeII GATC 4 cut(s) 139, 517, 592, 894
NgoMIV GCCGGC 1 cut(s) 389
NlaIII CATG 3 cut(s) 334, 776, 914
NlaIV GGNNCC 3 cut(s) 76, 352, 411
NmuCI GTSAC 1 cut(s) 379
PagI TCATGA 1 cut(s) 910
PceI AGGCCT 1 cut(s) 374
PcsI WCGNNNNNNNCGW 2 cut(s) 216, 315
PdiI GCCGGC 1 cut(s) 391
PflFI GACNNNGTC 4 cut(s) 89, 218, 323, 863
PflMI CCANNNNNTGG 1 cut(s) 763
PkrI GCNGC 6 cut(s) 42, 110, 117, 262, 283, 613
PleI GAGTC 1 cut(s) 80
PluTI GGCGCC 1 cut(s) 354
PpsI GAGTC 1 cut(s) 80
PpuMI RGGWCCY 2 cut(s) 75, 199
Psp5II RGGWCCY 2 cut(s) 75, 199
Psp6I CCWGG 2 cut(s) 96, 284
PspFI CCCAGC 2 cut(s) 102, 132
PspGI CCWGG 2 cut(s) 96, 284
PspN4I GGNNCC 3 cut(s) 76, 352, 411
PspPI GGNCC 3 cut(s) 75, 100, 199
PspPPI RGGWCCY 2 cut(s) 75, 199
PsyI GACNNNGTC 4 cut(s) 89, 218, 323, 863
RsaI GTAC 2 cut(s) 125, 411
RsaNI GTAC 2 cut(s) 124, 410
RseI CAYNNNNRTG 1 cut(s) 777
SalI GTCGAC 1 cut(s) 239
SaqAI TTAA 2 cut(s) 459, 555
SatI GCNGC 6 cut(s) 41, 109, 116, 261, 282, 612
Sau3AI GATC 4 cut(s) 139, 517, 592, 894
Sau96I GGNCC 3 cut(s) 75, 100, 199
SchI GAGTC 1 cut(s) 80
ScrFI CCNGG 3 cut(s) 98, 286, 761
SduI GDGCHC 2 cut(s) 399, 632
SfaNI GCATC 2 cut(s) 180, 598
SfoI GGCGCC 1 cut(s) 352
SgrAI CRCCGGYG 1 cut(s) 389
SinI GGWCC 2 cut(s) 75, 199
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
SpeI ACTAGT 1 cut(s) 671
Sse9I AATT 6 cut(s) 46, 305, 430, 676, 749, 885
SseBI AGGCCT 1 cut(s) 374
SspDI GGCGCC 1 cut(s) 350
SspMI CTAG 2 cut(s) 672, 819
StuI AGGCCT 1 cut(s) 374
StyD4I CCNGG 3 cut(s) 96, 284, 759
StyI CCWWGG 1 cut(s) 738
TaaI ACNGT 1 cut(s) 919
TaiI ACGT 3 cut(s) 222, 381, 402
TaqI TCGA 6 cut(s) 222, 240, 309, 365, 606, 707
TasI AATT 6 cut(s) 46, 305, 430, 676, 749, 885
TauI GCSGC 5 cut(s) 43, 111, 263, 284, 614
Tru1I TTAA 2 cut(s) 459, 555
Tru9I TTAA 2 cut(s) 459, 555
TscAI CASTG 1 cut(s) 637
TseFI GTSAC 1 cut(s) 379
TseI GCWGC 1 cut(s) 115
Tsp45I GTSAC 1 cut(s) 379
TspDTI ATGAA 2 cut(s) 9, 659
TspGWI ACGGA 1 cut(s) 79
TspRI CASTG 1 cut(s) 637
Tth111I GACNNNGTC 4 cut(s) 89, 218, 323, 863
Van91I CCANNNNNTGG 1 cut(s) 763
VneI GTGCAC 1 cut(s) 628
VpaK11BI GGWCC 2 cut(s) 75, 199
XagI CCTNNNNNAGG 2 cut(s) 194, 275
XapI RAATTY 3 cut(s) 46, 305, 430
XmiI GTMKAC 1 cut(s) 240
XspI CTAG 2 cut(s) 672, 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.