FvH4_6g37930

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000136
Physical Location & Seq
Reverse (-)
29960460 .. 29964457
3998 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g37930.t1

Sequence Viewer

Length: 1410 bp
ATGGATTGGAAGTCTGTTGGCAAGAAGGTGAAAGACGAAATATGGAAGGAGGTTCAGGACAATTTGCTAAATGTTCCAGAAGGATATAGAGCTGTATGTATGAGATCTTGCAATACTTTTTGGAAAGATCATAAAAGCAAAACAAAGATCAAGTACTTTAAGAAGAACAAGGATGATCCAGATCTTGTAAACAATCCTCCTGCACATATTGTGATGGAGCAATGGGCTGACCTAGTTGCTTATTGGAGTAGTGAGGATGCTAAGATGATATCTAGAAGAAATTCGTGCAACCGAGAGCTGCGTGGACCGGTTCATAATACTGGTCGAAAACACTTTGCTCAACTACGCTATGAGCAAATTGGAGAAGAAACTGATAAGATGAGTGTGTGGAAAAAAGCGCGAGACATGTCAAACCCTGAAGTAGCTGAAGCAATTGAACCTGAGGACCAGAGGAACCTTAAGGCTGTTAAAGACCGAGTATTTCATTCAGTGATGGGGGAGGATGGACATGGGTATTGTCGTACTTATGGATCTAGTGTGCCTCGAAATTTTGTGTATCCACAGTCATCAACCCCATCTGCAAATTCTAATGATTTGGTTCAGAAAATAACTGAATCTATTGCAAAGCACTTTGAGGAAAAGTTTGAGAGGATGGAAGCTCGACTAAATTCTCTAGAGAACAAGGAGAGGAATCACAATGGACAGGTTCTGGATGCAAGTAGTGGTTATGAAACAGACCGGAGAGAGTCCATTGGCGAACAACCACATTCACCTTCTGCTCCATCACAGCCAATTACCGAAGGGAGTAAACAAGCGTCGGCAATCAAACTACGCCTTTGGCTGTCGCAAAAGAGTATGCCACGACATTTTGCCGTCGCAAATAGTATTGGCGACGCCACTATTTGCGATGGACGCTTTGCCGTCGCAGCGCCGTCGCGAATGCTGTTTTGCCAACGGTTTTGCGCCGTGGTCAAACTACTTTTTTTTTGTAGTGACTTGCTCTGGCTTCCCAAGCTTGGAGACTTCCAAATTCAAGAAAAGGGTTTGGATTCCGATTTGCCAAATGGGTGGATGTTGGGCGAAGCTGAAATAGAAGGTAGGAGGAGGAAGAGTGAAGAGAGGGGATTCGGCTGGTGGTCGTCGTTCTGTCATCGACCGCTCCATGGTGGCAGCTGGGCGGAGCTGCTGCTCAATCTCAGACCCTCTCTCTTCTCACTCGGACAAAATGAGAGGAAGAGAGATAGGTATGCCACGGCTTCATTCCACCGTCGCAAAGTTTACATTTTGTCGCCACAACGCCCATATGCCGTCGCAAAGTTTAGCGACGGAAGCGTTGCCGTGGCAGCGCCGTCGCGAAACTTAGACCAATGGCGACGGCAAATTGGTGCCATGGCAATTTGGTGTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

470

Amino Acids

53.73

Weight (kDa)

9.18

Isoelectric Point (pI)

55.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 73 - 179 4.6e-12 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1385
AccBSI CCGCTC 1 cut(s) 1159
AccII CGCG 3 cut(s) 400, 937, 1354
AciI CCGC 2 cut(s) 1157, 1178
AclWI GGATC 2 cut(s) 170, 538
AcsI RAATTY 5 cut(s) 280, 547, 583, 667, 1029
AcuI CTGAAG 2 cut(s) 438, 447
AcyI GRCGYC 1 cut(s) 894
AfaI GTAC 2 cut(s) 155, 523
AfiI CCNNNNNNNGG 2 cut(s) 1016, 1163
AflII CTTAAG 1 cut(s) 458
AflIII ACRYGT 1 cut(s) 405
AgeI ACCGGT 1 cut(s) 307
AgsI TTSAA 2 cut(s) 437, 1034
AluBI AGCT 8 cut(s) 92, 298, 425, 659, 1015, 1085, 1173, 1183
AluI AGCT 8 cut(s) 92, 298, 425, 659, 1015, 1085, 1173, 1183
Alw26I GTCTC 2 cut(s) 396, 1014
AlwI GGATC 2 cut(s) 170, 538
AlwNI CAGNNNCTG 1 cut(s) 709
ApeKI GCWGC 6 cut(s) 298, 926, 1170, 1183, 1186, 1343
ApoI RAATTY 5 cut(s) 280, 547, 583, 667, 1029
AsiGI ACCGGT 1 cut(s) 307
Asp700I GAANNNNTTC 1 cut(s) 280
AspLEI GCGC 4 cut(s) 400, 931, 965, 1348
AspS9I GGNCC 2 cut(s) 305, 445
AsuHPI GGTGA 2 cut(s) 40, 762
AvaII GGWCC 2 cut(s) 305, 445
AxyI CCTNAGG 1 cut(s) 441
BanI GGYRCC 1 cut(s) 1385
BbvI GCAGC 6 cut(s) 285, 938, 1170, 1173, 1182, 1355
BccI CCATC 7 cut(s) 208, 487, 497, 583, 646, 790, 902
BceAI ACGGC 9 cut(s) 857, 905, 916, 950, 1269, 1292, 1322, 1333, 1391
BcgI CGANNNNNNTGC 4 cut(s) 915, 949, 1332, 1366
BciVI GTATCC 1 cut(s) 567
BcoDI GTCTC 2 cut(s) 396, 1014
BfaI CTAG 4 cut(s) 233, 273, 534, 674
BfoI RGCGCY 2 cut(s) 932, 1349
BfrI CTTAAG 1 cut(s) 458
BfuI GTATCC 1 cut(s) 567
BglII AGATCT 2 cut(s) 104, 181
BisI GCNGC 6 cut(s) 299, 927, 1171, 1184, 1187, 1344
BlsI GCNGC 6 cut(s) 300, 928, 1172, 1185, 1188, 1345
BmcAI AGTACT 1 cut(s) 155
Bme18I GGWCC 2 cut(s) 305, 445
BmgT120I GGNCC 2 cut(s) 305, 445
BmiI GGNNCC 2 cut(s) 455, 1387
BmsI GCATC 2 cut(s) 247, 703
BsaBI GATNNNNATC 1 cut(s) 180
BsaHI GRCGYC 1 cut(s) 894
BsaJI CCNNGG 5 cut(s) 966, 1162, 1251, 1338, 1389
BsaWI WCCGGW 2 cut(s) 307, 738
BsaXI ACNNNNNCTCC 2 cut(s) 1096, 1126
Bsc4I CCNNNNNNNGG 2 cut(s) 1016, 1163
Bse118I RCCGGY 1 cut(s) 307
Bse1I ACTGG 1 cut(s) 325
Bse21I CCTNAGG 1 cut(s) 441
Bse3DI GCAATG 1 cut(s) 227
Bse8I GATNNNNATC 1 cut(s) 180
BseDI CCNNGG 5 cut(s) 966, 1162, 1251, 1338, 1389
BseGI GGATG 6 cut(s) 178, 262, 508, 657, 718, 1077
BseJI GATNNNNATC 1 cut(s) 180
BseLI CCNNNNNNNGG 2 cut(s) 1016, 1163
BseMI GCAATG 1 cut(s) 227
BseMII CTCAG 2 cut(s) 432, 1210
BseNI ACTGG 1 cut(s) 325
BseRI GAGGAG 1 cut(s) 1117
BseXI GCAGC 6 cut(s) 285, 938, 1170, 1173, 1182, 1355
BseYI CCCAGC 1 cut(s) 1173
BsgI GTGCAG 1 cut(s) 186
Bsh1236I CGCG 3 cut(s) 400, 937, 1354
Bsh1285I CGRYCG 1 cut(s) 1157
BshNI GGYRCC 1 cut(s) 1385
BshTI ACCGGT 1 cut(s) 307
BsiEI CGRYCG 1 cut(s) 1157
BsiSI CCGG 2 cut(s) 308, 739
BslI CCNNNNNNNGG 2 cut(s) 1016, 1163
BsmAI GTCTC 2 cut(s) 396, 1014
BsmI GAATGC 1 cut(s) 945
Bsp143I GATC 6 cut(s) 104, 127, 147, 175, 181, 530
Bsp19I CCATGG 2 cut(s) 1162, 1389
Bsp68I TCGCGA 2 cut(s) 937, 1354
BspACI CCGC 2 cut(s) 1157, 1178
BspCNI CTCAG 2 cut(s) 433, 1209
BspFNI CGCG 3 cut(s) 400, 937, 1354
BspLI GGNNCC 2 cut(s) 455, 1387
BspPI GGATC 2 cut(s) 170, 538
BspT107I GGYRCC 1 cut(s) 1385
BspTI CTTAAG 1 cut(s) 458
BsrBI CCGCTC 1 cut(s) 1159
BsrDI GCAATG 1 cut(s) 227
BsrFI RCCGGY 1 cut(s) 307
BsrI ACTGG 1 cut(s) 325
BssAI RCCGGY 1 cut(s) 307
BssECI CCNNGG 5 cut(s) 966, 1162, 1251, 1338, 1389
BssMI GATC 6 cut(s) 104, 127, 147, 175, 181, 530
BssNI GRCGYC 1 cut(s) 894
BssT1I CCWWGG 2 cut(s) 1162, 1389
Bst4CI ACNGT 3 cut(s) 564, 957, 1268
Bst6I CTCTTC 4 cut(s) 1103, 1110, 1214, 1229
BstACI GRCGYC 1 cut(s) 894
BstAFI CTTAAG 1 cut(s) 458
BstDEI CTNAG 4 cut(s) 261, 441, 1196, 1360
BstDSI CCRYGG 5 cut(s) 966, 1162, 1251, 1338, 1389
BstF5I GGATG 6 cut(s) 178, 262, 508, 657, 718, 1077
BstFNI CGCG 3 cut(s) 400, 937, 1354
BstH2I RGCGCY 2 cut(s) 932, 1349
BstHHI GCGC 4 cut(s) 400, 931, 965, 1348
BstKTI GATC 6 cut(s) 107, 130, 150, 178, 184, 533
BstMAI GTCTC 2 cut(s) 396, 1014
BstMBI GATC 6 cut(s) 104, 127, 147, 175, 181, 530
BstMCI CGRYCG 1 cut(s) 1157
BstMWI GCNNNNNNNGC 5 cut(s) 912, 926, 1012, 1329, 1343
BstNSI RCATGY 1 cut(s) 409
BstUI CGCG 3 cut(s) 400, 937, 1354
BstV1I GCAGC 6 cut(s) 285, 938, 1170, 1173, 1182, 1355
BstX2I RGATCY 3 cut(s) 104, 181, 530
BstXI CCANNNNNNTGG 1 cut(s) 1068
BstYI RGATCY 3 cut(s) 104, 181, 530
Bsu36I CCTNAGG 1 cut(s) 441
BsuI GTATCC 1 cut(s) 567
BtgI CCRYGG 5 cut(s) 966, 1162, 1251, 1338, 1389
BtgZI GCGATG 1 cut(s) 921
BtsCI GGATG 6 cut(s) 178, 262, 508, 657, 718, 1077
BtsIMutI CAGTG 1 cut(s) 495
BtuMI TCGCGA 2 cut(s) 937, 1354
CaiI CAGNNNCTG 1 cut(s) 709
CfoI GCGC 4 cut(s) 400, 931, 965, 1348
Cfr10I RCCGGY 1 cut(s) 307
Cfr13I GGNCC 2 cut(s) 305, 445
CseI GACGC 3 cut(s) 804, 902, 921
Csp6I GTAC 2 cut(s) 154, 522
CspAI ACCGGT 1 cut(s) 307
CviAII CATG 4 cut(s) 406, 509, 1163, 1390
CviQI GTAC 2 cut(s) 154, 522
DdeI CTNAG 4 cut(s) 261, 441, 1196, 1360
DpnI GATC 6 cut(s) 106, 129, 149, 177, 183, 532
DpnII GATC 6 cut(s) 104, 127, 147, 175, 181, 530
Eam1104I CTCTTC 4 cut(s) 1103, 1110, 1214, 1229
EarI CTCTTC 4 cut(s) 1103, 1110, 1214, 1229
EciI GGCGGA 1 cut(s) 1193
Eco130I CCWWGG 2 cut(s) 1162, 1389
Eco32I GATATC 1 cut(s) 270
Eco47I GGWCC 2 cut(s) 305, 445
Eco57I CTGAAG 2 cut(s) 438, 447
Eco81I CCTNAGG 1 cut(s) 441
EcoRV GATATC 1 cut(s) 270
EcoT14I CCWWGG 2 cut(s) 1162, 1389
ErhI CCWWGG 2 cut(s) 1162, 1389
FaeI CATG 4 cut(s) 409, 512, 1166, 1393
FatI CATG 4 cut(s) 405, 508, 1162, 1389
FauNDI CATATG 1 cut(s) 1303
Fnu4HI GCNGC 6 cut(s) 299, 927, 1171, 1184, 1187, 1344
FokI GGATG 6 cut(s) 185, 269, 515, 664, 725, 1084
Fsp4HI GCNGC 6 cut(s) 299, 927, 1171, 1184, 1187, 1344
FspBI CTAG 4 cut(s) 233, 273, 534, 674
GlaI GCGC 4 cut(s) 399, 930, 964, 1347
GluI GCNGC 6 cut(s) 299, 927, 1171, 1184, 1187, 1344
GsaI CCCAGC 1 cut(s) 1177
HaeII RGCGCY 2 cut(s) 932, 1349
HapII CCGG 2 cut(s) 308, 739
HgaI GACGC 3 cut(s) 804, 902, 921
HhaI GCGC 4 cut(s) 400, 931, 965, 1348
Hin1I GRCGYC 1 cut(s) 894
Hin1II CATG 4 cut(s) 409, 512, 1166, 1393
Hin6I GCGC 4 cut(s) 398, 929, 963, 1346
HinP1I GCGC 4 cut(s) 398, 929, 963, 1346
HindIII AAGCTT 1 cut(s) 1013
HinfI GANTC 5 cut(s) 614, 691, 746, 1049, 1125
HpaII CCGG 2 cut(s) 308, 739
HphI GGTGA 2 cut(s) 40, 762
Hpy166II GTNNAC 4 cut(s) 190, 305, 809, 1279
Hpy188I TCNGA 4 cut(s) 603, 1054, 1199, 1220
Hpy188III TCNNGA 9 cut(s) 56, 77, 179, 273, 674, 710, 936, 1034, 1353
Hpy8I GTNNAC 4 cut(s) 190, 305, 809, 1279
HpyAV CCTTC 6 cut(s) 19, 40, 74, 783, 794, 1088
HpyCH4III ACNGT 3 cut(s) 564, 957, 1268
HpyCH4V TGCA 6 cut(s) 111, 203, 288, 581, 623, 716
HpyF10VI GCNNNNNNNGC 5 cut(s) 912, 926, 1012, 1329, 1343
HpyF3I CTNAG 4 cut(s) 261, 441, 1196, 1360
Hsp92I GRCGYC 1 cut(s) 894
Hsp92II CATG 4 cut(s) 409, 512, 1166, 1393
HspAI GCGC 4 cut(s) 398, 929, 963, 1346
Kzo9I GATC 6 cut(s) 104, 127, 147, 175, 181, 530
LmnI GCTCC 4 cut(s) 217, 784, 1164, 1180
Lsp1109I GCAGC 6 cut(s) 285, 938, 1170, 1173, 1182, 1355
LweI GCATC 2 cut(s) 247, 703
MaeI CTAG 4 cut(s) 233, 273, 534, 674
MaeIII GTNAC 1 cut(s) 992
MalI GATC 6 cut(s) 106, 129, 149, 177, 183, 532
MbiI CCGCTC 1 cut(s) 1159
MboI GATC 6 cut(s) 104, 127, 147, 175, 181, 530
MboII GAAGA 7 cut(s) 175, 288, 377, 1120, 1127, 1201, 1246
MfeI CAATTG 1 cut(s) 432
MflI RGATCY 3 cut(s) 104, 181, 530
MlyI GAGTC 1 cut(s) 755
MroXI GAANNNNTTC 1 cut(s) 280
MseI TTAA 3 cut(s) 159, 459, 468
MspA1I CMGCKG 1 cut(s) 1173
MspCI CTTAAG 1 cut(s) 458
MspI CCGG 2 cut(s) 308, 739
MunI CAATTG 1 cut(s) 432
Mva1269I GAATGC 1 cut(s) 945
MvnI CGCG 3 cut(s) 400, 937, 1354
MwoI GCNNNNNNNGC 5 cut(s) 912, 926, 1012, 1329, 1343
NcoI CCATGG 2 cut(s) 1162, 1389
NdeI CATATG 1 cut(s) 1303
NdeII GATC 6 cut(s) 104, 127, 147, 175, 181, 530
NlaIII CATG 4 cut(s) 409, 512, 1166, 1393
NlaIV GGNNCC 2 cut(s) 455, 1387
NmuCI GTSAC 1 cut(s) 992
NruI TCGCGA 2 cut(s) 937, 1354
NspI RCATGY 1 cut(s) 409
PciI ACATGT 1 cut(s) 405
PctI GAATGC 1 cut(s) 945
PdmI GAANNNNTTC 1 cut(s) 280
PfeI GAWTC 4 cut(s) 614, 691, 1049, 1125
PinAI ACCGGT 1 cut(s) 307
PkrI GCNGC 6 cut(s) 300, 928, 1172, 1185, 1188, 1345
PleI GAGTC 1 cut(s) 754
PpsI GAGTC 1 cut(s) 754
PscI ACATGT 1 cut(s) 405
PspFI CCCAGC 1 cut(s) 1173
PspN4I GGNNCC 2 cut(s) 455, 1387
PspPI GGNCC 2 cut(s) 305, 445
PstNI CAGNNNCTG 1 cut(s) 709
PsuI RGATCY 3 cut(s) 104, 181, 530
PvuII CAGCTG 1 cut(s) 1173
RruI TCGCGA 2 cut(s) 937, 1354
RsaI GTAC 2 cut(s) 155, 523
RsaNI GTAC 2 cut(s) 154, 522
SaqAI TTAA 3 cut(s) 159, 459, 468
SatI GCNGC 6 cut(s) 299, 927, 1171, 1184, 1187, 1344
Sau3AI GATC 6 cut(s) 104, 127, 147, 175, 181, 530
Sau96I GGNCC 2 cut(s) 305, 445
ScaI AGTACT 1 cut(s) 155
SchI GAGTC 1 cut(s) 755
SfaNI GCATC 2 cut(s) 247, 703
SinI GGWCC 2 cut(s) 305, 445
SmlI CTYRAG 1 cut(s) 458
SmoI CTYRAG 1 cut(s) 458
SsiI CCGC 2 cut(s) 1157, 1178
SspMI CTAG 4 cut(s) 233, 273, 534, 674
StyI CCWWGG 2 cut(s) 1162, 1389
TaaI ACNGT 3 cut(s) 564, 957, 1268
TaqI TCGA 4 cut(s) 325, 544, 661, 1153
TaqII GACCGA 1 cut(s) 489
TatI WGTACW 1 cut(s) 153
TfiI GAWTC 4 cut(s) 614, 691, 1049, 1125
Tru1I TTAA 3 cut(s) 159, 459, 468
Tru9I TTAA 3 cut(s) 159, 459, 468
TscAI CASTG 1 cut(s) 495
TseFI GTSAC 1 cut(s) 992
TseI GCWGC 6 cut(s) 298, 926, 1170, 1183, 1186, 1343
Tsp45I GTSAC 1 cut(s) 992
TspDTI ATGAA 4 cut(s) 302, 473, 744, 1248
TspGWI ACGGA 1 cut(s) 1341
TspRI CASTG 1 cut(s) 495
Vha464I CTTAAG 1 cut(s) 458
VpaK11BI GGWCC 2 cut(s) 305, 445
XapI RAATTY 5 cut(s) 280, 547, 583, 667, 1029
XbaI TCTAGA 2 cut(s) 272, 673
XceI RCATGY 1 cut(s) 409
XmnI GAANNNNTTC 1 cut(s) 280
XspI CTAG 4 cut(s) 233, 273, 534, 674
ZrmI AGTACT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.