Rw1G022160

Transposase family tnp2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000136
Physical Location & Seq
Forward (+)
46949731 .. 46951162
1432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022160.1

Sequence Viewer

Length: 1401 bp
ATGGATAAGAGTTGGATTGATATACGAGAAACGGACTGGCATAAATATGAAGATGGAGTTGATAGTTTTTTGGAGTTTGCATTCGCCAACAGCGTTGATCCAACAAGGATAAAGTGTCCTTGTAAGCTATGTCGGAATCGCTATTTTAAGTCTAGGGAGGAAGCAAGAGAGGATATACTGGTAGACGGATTTTGGGAAACGTATAGAATATGGGATAAACATGGTGAACCTTTCGGACCTGCAGCTCCATACCAAGGTAGTGGGGTTAACTCTGATTCGATCATCATGGATGATATGTTTGGCATGATTAATGAGGCGATTGAGATTCCCACTGCAAATCCTGGTTTAGGTGATGATTTTCCAGAATCTACAAAATTTATGAAATTGCTCAAAGATGCAGAATGTCCCTTATATCCCGGTTGTGAAAAGTTTACGAAATTGTCATTCATTGTACGACTATTACACTTGAAAGTTCTTTGTGGATGGACAAACAAGTCTCTCGATTTATTGCTGGAGCTTTTAAAATCTTCCTACCCTCATGGAGTAAGCTTACCAGATTCTTTTTATGAGGCTCAGAAGCTGACTGCTGACTTAGGCTTCACGTACAAAAATTGGGATGCATATCCTAATAGCTGTATGTTATTTAGAAATGAGGATGAGAAACTTGAAAAATGTGCTATTTGTGGGGAATCTCGATATAAAGAGTCTGAGCATGATTCTAATGACCAGCAGAGTGGTAGAAAAGTTCCAGCAAAACAAGTGAGGTACTTTCCTTTAAAACCAGGTTTACAGAGATTGTTTATGTGTTCTAAAACTGCTTCCCTTATGAAGTGGCATGCAGAAAACCGCACCAAAGATGATGTGCTTAGGCATCCAGCTGATAGTCCTGTGTGGAAAACACTTGATCAAAAGTTTCCAGATTTTTCTAGTGATAGTCGTAATGTTAGACTTGGGTTAGCGGCTGATGGGTTCAACCCATTCCGAACAATGTCCATAGCTCACAGTACATGGCCTGTTGTTCTAGTACCTTATAACTTGCCGCCTTGGATGTGCATGAAGCAGCCATTTTTCATTTTGTCAACGCTCATTGATGGCCCAAAAGGACCTGGAAATAAGATTGAGGTATTTCTACAACCTTTAATTGAAGTGCTAAAAGAATTATGGCATGAAGGTGTTCCTACTTATGATGCCTCAACTAATCAGATGTTCAACTTGCGTGCCATGTTGTTATGGACAATCAACGACTTTCCAGCTTATGCAAATTTATCAGGTTGGAGCACTAAGGGTGCTAAAGCATGTCCTTGTTGCAATAAGAATACTAAATCTAGTTGGTTGAAACATGGGAGGAAGTATTGTTATATGTGTCACCGTAGATTCTTACCAAGGAATCATAAATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

466

Amino Acids

53.76

Weight (kDa)

8.05

Isoelectric Point (pI)

45.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 3 - 76 1.2e-19 Transposase-associated domain
Transposase_21 PF02992 286 - 466 1.2e-90 Transposase family tnp2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1032
AasI GACNNNNNNGTC 1 cut(s) 493
Acc36I ACCTGC 1 cut(s) 247
AccI GTMKAC 1 cut(s) 183
AciI CCGC 3 cut(s) 847, 959, 1040
AclWI GGATC 1 cut(s) 92
AcsI RAATTY 3 cut(s) 374, 1261, 1394
AfaI GTAC 5 cut(s) 453, 605, 767, 1006, 1026
AfiI CCNNNNNNNGG 2 cut(s) 254, 347
AgsI TTSAA 6 cut(s) 469, 668, 973, 1145, 1210, 1336
AjnI CCWGG 3 cut(s) 340, 781, 1105
AluBI AGCT 9 cut(s) 127, 245, 517, 549, 580, 633, 878, 998, 1253
AluI AGCT 9 cut(s) 127, 245, 517, 549, 580, 633, 878, 998, 1253
Alw21I GWGCWC 1 cut(s) 1280
Alw26I GTCTC 1 cut(s) 501
AlwI GGATC 1 cut(s) 92
AlwNI CAGNNNCTG 1 cut(s) 580
AoxI GGCC 2 cut(s) 1010, 1093
ApeKI GCWGC 2 cut(s) 242, 1060
ApoI RAATTY 3 cut(s) 374, 1261, 1394
AseI ATTAAT 1 cut(s) 309
Asp700I GAANNNNTTC 1 cut(s) 1173
AspS9I GGNCC 3 cut(s) 236, 1094, 1103
AsuC2I CCSGG 1 cut(s) 417
AsuHPI GGTGA 3 cut(s) 236, 362, 1358
AvaII GGWCC 2 cut(s) 236, 1103
Bbv12I GWGCWC 1 cut(s) 1280
BbvI GCAGC 2 cut(s) 254, 1072
BccI CCATC 4 cut(s) 47, 477, 959, 1085
BciT130I CCWGG 3 cut(s) 342, 783, 1107
BclI TGATCA 1 cut(s) 904
BcnI CCSGG 1 cut(s) 417
BcoDI GTCTC 1 cut(s) 501
BfaI CTAG 4 cut(s) 153, 927, 1022, 1326
BfmI CTRYAG 1 cut(s) 240
BfuAI ACCTGC 1 cut(s) 247
BisI GCNGC 4 cut(s) 243, 960, 1040, 1061
BlsI GCNGC 4 cut(s) 244, 961, 1041, 1062
Bme1390I CCNGG 4 cut(s) 342, 417, 783, 1107
Bme18I GGWCC 2 cut(s) 236, 1103
BmgT120I GGNCC 3 cut(s) 236, 1094, 1103
BmrFI CCNGG 4 cut(s) 342, 417, 783, 1107
BmsI GCATC 4 cut(s) 385, 607, 880, 1177
BpmI CTGGAG 1 cut(s) 533
Bpu10I CCTNAGC 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 417
BsaAI YACGTR 1 cut(s) 603
BsaBI GATNNNNATC 1 cut(s) 621
BsaJI CCNNGG 3 cut(s) 253, 1043, 1382
Bsc4I CCNNNNNNNGG 2 cut(s) 254, 347
Bse1I ACTGG 2 cut(s) 41, 183
Bse8I GATNNNNATC 1 cut(s) 621
BseBI CCWGG 3 cut(s) 342, 783, 1107
BseDI CCNNGG 3 cut(s) 253, 1043, 1382
BseGI GGATG 6 cut(s) 295, 488, 622, 661, 871, 1053
BseJI GATNNNNATC 1 cut(s) 621
BseLI CCNNNNNNNGG 2 cut(s) 254, 347
BseMII CTCAG 2 cut(s) 587, 699
BseNI ACTGG 2 cut(s) 41, 183
BseXI GCAGC 2 cut(s) 254, 1072
BshFI GGCC 2 cut(s) 1012, 1095
BsiHKAI GWGCWC 1 cut(s) 1280
BsiSI CCGG 1 cut(s) 417
BslFI GGGAC 1 cut(s) 390
BslI CCNNNNNNNGG 2 cut(s) 254, 347
BsmAI GTCTC 1 cut(s) 501
BsmFI GGGAC 1 cut(s) 390
BsmI GAATGC 1 cut(s) 80
BsnI GGCC 2 cut(s) 1012, 1095
Bsp1286I GDGCHC 1 cut(s) 1280
Bsp143I GATC 3 cut(s) 97, 279, 904
BspACI CCGC 3 cut(s) 847, 959, 1040
BspANI GGCC 2 cut(s) 1012, 1095
BspCNI CTCAG 2 cut(s) 586, 700
BspMAI CTGCAG 1 cut(s) 244
BspMI ACCTGC 1 cut(s) 247
BspPI GGATC 1 cut(s) 92
BsrI ACTGG 2 cut(s) 41, 183
BssECI CCNNGG 3 cut(s) 253, 1043, 1382
BssMI GATC 3 cut(s) 97, 279, 904
BssT1I CCWWGG 3 cut(s) 253, 1043, 1382
Bst2UI CCWGG 3 cut(s) 342, 783, 1107
Bst4CI ACNGT 2 cut(s) 1004, 1370
BstBAI YACGTR 1 cut(s) 603
BstC8I GCNNGC 2 cut(s) 837, 1218
BstDEI CTNAG 5 cut(s) 573, 592, 708, 866, 1281
BstENI CCTNNNNNAGG 1 cut(s) 345
BstF5I GGATG 6 cut(s) 295, 488, 622, 661, 871, 1053
BstKTI GATC 3 cut(s) 100, 282, 907
BstMAI GTCTC 1 cut(s) 501
BstMBI GATC 3 cut(s) 97, 279, 904
BstNI CCWGG 3 cut(s) 342, 783, 1107
BstNSI RCATGY 2 cut(s) 839, 1299
BstSCI CCNGG 4 cut(s) 340, 415, 781, 1105
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 2 cut(s) 254, 1072
BstXI CCANNNNNNTGG 2 cut(s) 260, 734
BsuRI GGCC 2 cut(s) 1012, 1095
BtsCI GGATG 6 cut(s) 295, 488, 622, 661, 871, 1053
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 1 cut(s) 330
BveI ACCTGC 1 cut(s) 247
Cac8I GCNNGC 2 cut(s) 837, 1218
CaiI CAGNNNCTG 1 cut(s) 580
Cfr13I GGNCC 3 cut(s) 236, 1094, 1103
CsiI ACCWGGT 1 cut(s) 781
Csp6I GTAC 5 cut(s) 452, 604, 766, 1005, 1025
CviQI GTAC 5 cut(s) 452, 604, 766, 1005, 1025
DdeI CTNAG 5 cut(s) 573, 592, 708, 866, 1281
DpnI GATC 3 cut(s) 99, 281, 906
DpnII GATC 3 cut(s) 97, 279, 904
DraI TTTAAA 2 cut(s) 522, 777
DrdI GACNNNNNNGTC 1 cut(s) 493
DseDI GACNNNNNNGTC 1 cut(s) 493
Eco130I CCWWGG 3 cut(s) 253, 1043, 1382
Eco47I GGWCC 2 cut(s) 236, 1103
EcoNI CCTNNNNNAGG 1 cut(s) 345
EcoO109I RGGNCCY 1 cut(s) 1103
EcoRII CCWGG 3 cut(s) 340, 781, 1105
EcoT14I CCWWGG 3 cut(s) 253, 1043, 1382
EcoT22I ATGCAT 1 cut(s) 622
ErhI CCWWGG 3 cut(s) 253, 1043, 1382
FaqI GGGAC 1 cut(s) 390
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 4 cut(s) 243, 960, 1040, 1061
FokI GGATG 6 cut(s) 302, 495, 629, 668, 858, 1060
Fsp4HI GCNGC 4 cut(s) 243, 960, 1040, 1061
FspBI CTAG 4 cut(s) 153, 927, 1022, 1326
GluI GCNGC 4 cut(s) 243, 960, 1040, 1061
GsuI CTGGAG 1 cut(s) 533
HaeIII GGCC 2 cut(s) 1012, 1095
HapII CCGG 1 cut(s) 417
HincII GTYRAC 2 cut(s) 268, 1080
HindII GTYRAC 2 cut(s) 268, 1080
HindIII AAGCTT 1 cut(s) 547
HpaI GTTAAC 1 cut(s) 268
HpaII CCGG 1 cut(s) 417
HphI GGTGA 3 cut(s) 236, 362, 1358
Hpy166II GTNNAC 6 cut(s) 184, 227, 268, 432, 788, 1080
Hpy188I TCNGA 7 cut(s) 135, 236, 274, 576, 709, 983, 1203
Hpy188III TCNNGA 4 cut(s) 362, 500, 693, 917
Hpy8I GTNNAC 6 cut(s) 184, 227, 268, 432, 788, 1080
HpyAV CCTTC 1 cut(s) 1163
HpyCH4III ACNGT 2 cut(s) 1004, 1370
HpyCH4IV ACGT 2 cut(s) 200, 602
HpyCH4V TGCA 9 cut(s) 80, 242, 335, 398, 620, 839, 1053, 1259, 1308
HpyF3I CTNAG 5 cut(s) 573, 592, 708, 866, 1281
HpySE526I ACGT 2 cut(s) 200, 602
Ksp22I TGATCA 1 cut(s) 904
KspAI GTTAAC 1 cut(s) 268
Kzo9I GATC 3 cut(s) 97, 279, 904
LmnI GCTCC 3 cut(s) 250, 514, 1275
Lsp1109I GCAGC 2 cut(s) 254, 1072
LweI GCATC 4 cut(s) 385, 607, 880, 1177
MabI ACCWGGT 1 cut(s) 781
MaeI CTAG 4 cut(s) 153, 927, 1022, 1326
MaeII ACGT 2 cut(s) 200, 602
MaeIII GTNAC 1 cut(s) 1364
MalI GATC 3 cut(s) 99, 281, 906
MboI GATC 3 cut(s) 97, 279, 904
MboII GAAGA 2 cut(s) 62, 519
MhlI GDGCHC 1 cut(s) 1280
MluCI AATT 8 cut(s) 374, 383, 437, 610, 1140, 1157, 1261, 1394
MlyI GAGTC 1 cut(s) 713
MmeI TCCRAC 3 cut(s) 113, 125, 1253
Mph1103I ATGCAT 1 cut(s) 622
MroXI GAANNNNTTC 1 cut(s) 1173
MseI TTAA 6 cut(s) 147, 267, 309, 521, 776, 1139
MslI CAYNNNNRTG 2 cut(s) 45, 1170
MspA1I CMGCKG 1 cut(s) 878
MspI CCGG 1 cut(s) 417
MspR9I CCNGG 4 cut(s) 342, 417, 783, 1107
Mva1269I GAATGC 1 cut(s) 80
MvaI CCWGG 3 cut(s) 342, 783, 1107
NciI CCSGG 1 cut(s) 417
NdeII GATC 3 cut(s) 97, 279, 904
NmuCI GTSAC 1 cut(s) 1364
NsiI ATGCAT 1 cut(s) 622
NspI RCATGY 2 cut(s) 839, 1299
PaeI GCATGC 1 cut(s) 839
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 1173
PfeI GAWTC 9 cut(s) 136, 275, 325, 365, 557, 689, 716, 1374, 1387
PkrI GCNGC 4 cut(s) 244, 961, 1041, 1062
PleI GAGTC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 712
Ppu21I YACGTR 1 cut(s) 603
PpuMI RGGWCCY 1 cut(s) 1103
PshBI ATTAAT 1 cut(s) 309
PsiI TTATAA 1 cut(s) 1032
Psp5II RGGWCCY 1 cut(s) 1103
Psp6I CCWGG 3 cut(s) 340, 781, 1105
PspGI CCWGG 3 cut(s) 340, 781, 1105
PspPI GGNCC 3 cut(s) 236, 1094, 1103
PspPPI RGGWCCY 1 cut(s) 1103
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 580
PvuII CAGCTG 1 cut(s) 878
RsaI GTAC 5 cut(s) 453, 605, 767, 1006, 1026
RsaNI GTAC 5 cut(s) 452, 604, 766, 1005, 1025
RseI CAYNNNNRTG 2 cut(s) 45, 1170
SaqAI TTAA 6 cut(s) 147, 267, 309, 521, 776, 1139
SatI GCNGC 4 cut(s) 243, 960, 1040, 1061
Sau3AI GATC 3 cut(s) 97, 279, 904
Sau96I GGNCC 3 cut(s) 236, 1094, 1103
SchI GAGTC 1 cut(s) 713
ScrFI CCNGG 4 cut(s) 342, 417, 783, 1107
SduI GDGCHC 1 cut(s) 1280
SexAI ACCWGGT 1 cut(s) 781
SfaNI GCATC 4 cut(s) 385, 607, 880, 1177
SfcI CTRYAG 1 cut(s) 240
SinI GGWCC 2 cut(s) 236, 1103
SmiMI CAYNNNNRTG 2 cut(s) 45, 1170
SphI GCATGC 1 cut(s) 839
Sse9I AATT 8 cut(s) 374, 383, 437, 610, 1140, 1157, 1261, 1394
SsiI CCGC 3 cut(s) 847, 959, 1040
SspMI CTAG 4 cut(s) 153, 927, 1022, 1326
StyD4I CCNGG 4 cut(s) 340, 415, 781, 1105
StyI CCWWGG 3 cut(s) 253, 1043, 1382
TaaI ACNGT 2 cut(s) 1004, 1370
TaiI ACGT 2 cut(s) 203, 605
TaqI TCGA 3 cut(s) 278, 501, 694
TasI AATT 8 cut(s) 374, 383, 437, 610, 1140, 1157, 1261, 1394
TatI WGTACW 1 cut(s) 1004
TauI GCSGC 2 cut(s) 962, 1042
TfiI GAWTC 9 cut(s) 136, 275, 325, 365, 557, 689, 716, 1374, 1387
Tru1I TTAA 6 cut(s) 147, 267, 309, 521, 776, 1139
Tru9I TTAA 6 cut(s) 147, 267, 309, 521, 776, 1139
TscAI CASTG 1 cut(s) 337
TseFI GTSAC 1 cut(s) 1364
TseI GCWGC 2 cut(s) 242, 1060
Tsp45I GTSAC 1 cut(s) 1364
TspDTI ATGAA 7 cut(s) 63, 395, 436, 842, 1060, 1070, 1182
TspGWI ACGGA 2 cut(s) 47, 201
TspRI CASTG 1 cut(s) 337
VpaK11BI GGWCC 2 cut(s) 236, 1103
VspI ATTAAT 1 cut(s) 309
XagI CCTNNNNNAGG 1 cut(s) 345
XapI RAATTY 3 cut(s) 374, 1261, 1394
XceI RCATGY 2 cut(s) 839, 1299
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 1173
XspI CTAG 4 cut(s) 153, 927, 1022, 1326
Zsp2I ATGCAT 1 cut(s) 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.