Rorug05G0038600

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
3095046 .. 3102760
7715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0038600.1

Sequence Viewer

Length: 2520 bp
ATGGGCTACCCTCTATTGCTAGCTTTCTGTTACATTTTGCTGTCTTCAAACTCACTAATTTCAATTGCAGTAGATACTTTGAGGGCAAACCAGGTCTTTACAACTGGTCAGACATTGGTATCTTCAGGCCAAAGGTTTGAGCTTGGGTTCTTCAACCCAGGTACCTCAAAAAATAGCTTCTTGGGTGTTTGGTACAAGAATATTCTCCCTCTCACTGTGGTTTGGGTGGCCAACAGAAACAACCCTATTATTCCTGGTTCTTCTCCAGCAAGTTTATCTCTAGGCTCTTCGGGGTTTTCGATTTCCACTAATGAGTCTTTGATTGTGTGGTCTGTGAATGTCTCTGTGGTCTTAAATAGTCCCATATTGCAGCTCTTGGACAATGGCAATCTGATCTTGAGAGATGAAAGCGCTGCAGATGCAGAGGGGTATGTGATTTGGCAGAGTTTTGATTACATAACAGATACTTTGTTGCCGGAAATGAAGCTAGGCTGGAATTTGGTCACAGGTTTAAACCGGAATATGACATCATGGGTGTCCTCCAGTGACCCCTCTACCGGAGAATTTACTTTCAGTCTGGACCGGCCTGATCAAGCACCTCAGTTGGTGGTTAGGAAAGGGTCTGAGAAGCTAAATAGATGGGGGCCTTGGGATGGAGTCAGATTCAGTGGTAGCGAGGAGCTTCAGCCCAATCCGGTATGGACTCCAATTTTCAATATAAGCAGTGAAGAGGTCTATTACACATTTCAAGATATAGACAAATCTACTTTAACAAGGTTTGTGATGAATCAAGATGGCTCGGCTGTATATTTTACTTGGAGAGCAAGTAACAATCAGTGGGGTGGGGTGGTGACACTTAAACAGAGCAGTTGTGATGGGTATGGGATTTGTGGTCCTTATGGAAGTTGTGACTCCAAAGGTCCTAGTTGCGAGTGTTTGAAAGGATTTGCTCCCAAGTCACCACAGGAATGGCAGATACTCACTTGGACTGGAGGCTGTGTGAGAAGATGGGACTTGGATTGTAAGAATGCAGATGGATTTGTTAGGTACAAGGGATTGAAGTTGCCGGATAACTCATTCCTGTTTGCAAACAGGAGTTTGAGCCTCAAGGAATGTGAGGCAGAGTGTGTGAAGAACTGTTCTTGTATGGCTTATACTAGGATTGATGTTCTTGCAAGAGGGGGAGACTGTGTTATGTGGTTTGTTGAATTGGTTGATATGAGAAACTATCCGGATGAAGGGGATGAGATTTATATTCGAATGGCAAGAAAAGAACTAGAGTCCATTGCTGATGCTAAGAAGAAAAAGCGAGTGAAAGTGGTTGTCACCATTGTCATGTCATCACTCAGTGGGATGCTTATTTTTGGTGTTGTTGTCTGCATCATTAATCGGAATAGGAAGACAAAGAGGAGAGCTGAAAGCAGAGAAAATCCATATCAAGTACACAGGGAAGAAATGCAGGAAGAGGACCTCGAGTTACCTATCTTGGATTTTGATACTATTTCAACTGCTACTGAGGAGTTCTCTATAGCAAATAAAATTGGAGAGGGTGGCTTTGGTAGTGTATACAAGGGTGTATTACCTTCTGGGCAAGAAATTGCAGTGAAGAGACTGTCAGTGCATTCTGGACAGGGCCTCCAAGAATTCAAGAATGAGGTTGTCTTGATTGCAAAGCTTCAACACCGGAATCTTGTGAAGCTCTTGGGATGCTGTATTGAAAGAGAAGAAAAAATGCTAATTTACGAGTACCTTCCCAACAAGAGCTTGGACCGATTCCTATTTGATAGAAGACGAAAAGAAGTATTGACTTGGAGGAAACGGTTTGACATTGTTATGGGAATTGCTCGAGGACTCCTGTATCTTCATCAAGACTCCAGGCTGAGAATTATCCATAGAGATCTCAAAGCAAGCAACATTTTACTAGACAGTGAGATGAAGTCGAAGATTTCTGACTTTGGAACCGCAAGAATTTTTGGGGGAGAACAGACTGAACAAATGACCAGGAGAGTGATCGGAACATATGGTTATATGTCTCCAGAATATGCTATGAGTGGACACTTCTCTGTGAAATCAGATGTATTCAGCTTCGGTGTGTTGGTCTTGGAGATAATAAGTGGCAGAAAGAATTCAGGATTTCATCACCCTGAGCATGACCTCAATCTTCTAGGACATGCATGGAATCTGTGGAATGAAGGAAATCCATTGCAACTGCTGGATGCCCACATAGAGAAATCTTCTTCTGTCAATGAAGTGACAAGATGTATTCAAGTAGCCCTTCTGTGTGTGCAGCAACGGATGGATGATAGACCGACTATGTCAACTGTTTTATTGATGTTGTCTAATGAGAATTATTTGATGCCCCAACCGAAAGAACCTGGTTTTATTACTGAACTTCTTCCCATGGGAGATACATCATCAAGTGGAAAGTATCTTCATACTGCTAATGATTTAACTAGCCAAAAGCAAAAGAAAACAATCCTTCTCCTAAGTCTCCTCCAGCCTATAATCTTCATCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

839

Amino Acids

94.53

Weight (kDa)

6.67

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 178 4.4e-28 D-mannose binding lectin
S_locus_glycop PF00954 213 - 320 5.2e-26 S-locus glycoprotein domain
PAN_2 PF08276 341 - 407 3.8e-17 PAN-like domain
Pkinase PF00069 509 - 776 2.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 510 - 776 2.8e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000045)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20031 FvH4_1g20032 FvH4_1g28811 FvH4_2g01463 FvH4_2g09182 FvH4_2g28261 FvH4_3g29411 FvH4_3g37471 FvH4_4g14101 FvH4_4g16371 FvH4_4g18821 FvH4_5g18832 FvH4_5g30171 FvH4_6g12302 FvH4_6g16683 FvH4_6g16753 FvH4_6g17021 FvH4_6g18902 FvH4_6g19251 FvH4_6g23332 FvH4_6g28111 FvH4_6g33201 FvH4_6g40361 FvH4_7g09171
prunus_persica Prupe.1G074300_v2.0.a1 Prupe.3G105600_v2.0.a1
pyrus_communis pycom05g10560 pycom07g05620 pycom12424g00110
rosa_chinensis RchiOBHm_Chr1g0334141 RchiOBHm_Chr5g0016671 RchiOBHm_Chr7g0208511 RchiOBHm_Chr7g0231041
rosa_laevigata RLG00000015243
rosa_multiflora Rmu_co7986832.1_g000001 Rmu_co8043772.1_g000001 Rmu_co8043774.1_g000001 Rmu_co8055874.1_g000001 Rmu_co8106278.1_g000001 Rmu_co8122148.1_g000001 Rmu_co8133260.1_g000001 Rmu_co8134318.1_g000001 Rmu_co8183860.1_g000001 Rmu_co8184294.1_g000001 Rmu_co8189556.1_g000001 Rmu_co8236577.1_g000001 Rmu_co8239421.1_g000001 Rmu_co8250871.1_g000001 Rmu_co8300345.1_g000001 Rmu_co8310915.1_g000001 Rmu_co8333321.1_g000001 Rmu_co8334427.1_g000001 Rmu_co8360619.1_g000001 Rmu_co8360619.1_g000002 Rmu_co8366931.1_g000001 Rmu_co8375289.1_g000001 Rmu_co8406881.1_g000001 Rmu_co8444187.1_g000001 Rmu_co8464563.1_g000001 Rmu_co8505097.1_g000001 Rmu_sc0000031.1_g000042 Rmu_sc0000031.1_g000043 Rmu_sc0000053.1_g000008 Rmu_sc0000104.1_g000026 Rmu_sc0000115.1_g000003 Rmu_sc0000148.1_g000077 Rmu_sc0000257.1_g000001 Rmu_sc0000311.1_g000016 Rmu_sc0000347.1_g000035 Rmu_sc0000365.1_g000048 Rmu_sc0000389.1_g000027 Rmu_sc0000399.1_g000009 Rmu_sc0000399.1_g000015 Rmu_sc0000408.1_g000016 Rmu_sc0000452.1_g000007 Rmu_sc0000458.1_g000015 Rmu_sc0000470.1_g000010 Rmu_sc0000498.1_g000067 Rmu_sc0000499.1_g000016 Rmu_sc0000536.1_g000029 Rmu_sc0000539.1_g000015 Rmu_sc0000544.1_g000005 Rmu_sc0000571.1_g000013 Rmu_sc0000573.1_g000013 Rmu_sc0000573.1_g000014 Rmu_sc0000600.1_g000043 Rmu_sc0000631.1_g000014 Rmu_sc0000657.1_g000014 Rmu_sc0000711.1_g000005 Rmu_sc0000711.1_g000059 Rmu_sc0000717.1_g000024 Rmu_sc0000717.1_g000025 Rmu_sc0000737.1_g000001 Rmu_sc0000744.1_g000081 Rmu_sc0000757.1_g000011 Rmu_sc0000784.1_g000026 Rmu_sc0000800.1_g000010 Rmu_sc0000816.1_g000017 Rmu_sc0000816.1_g000022 Rmu_sc0000870.1_g000047 Rmu_sc0000898.1_g000107 Rmu_sc0000929.1_g000011 Rmu_sc0001009.1_g000034 Rmu_sc0001059.1_g000021 Rmu_sc0001062.1_g000003 Rmu_sc0001124.1_g000027 Rmu_sc0001169.1_g000015 Rmu_sc0001169.1_g000016 Rmu_sc0001176.1_g000011 Rmu_sc0001176.1_g000012 Rmu_sc0001200.1_g000058 Rmu_sc0001200.1_g000059 Rmu_sc0001211.1_g000132 Rmu_sc0001250.1_g000019 Rmu_sc0001288.1_g000007 Rmu_sc0001416.1_g000012 Rmu_sc0001455.1_g000033 Rmu_sc0001461.1_g000077 Rmu_sc0001514.1_g000008 Rmu_sc0001531.1_g000015 Rmu_sc0001531.1_g000016 Rmu_sc0001548.1_g000037 Rmu_sc0001576.1_g000031 Rmu_sc0001615.1_g000011 Rmu_sc0001648.1_g000052 Rmu_sc0001648.1_g000053 Rmu_sc0001694.1_g000025 Rmu_sc0001696.1_g000022 Rmu_sc0001716.1_g000025 Rmu_sc0001799.1_g000003 Rmu_sc0001801.1_g000010 Rmu_sc0001801.1_g000011 Rmu_sc0001814.1_g000007 Rmu_sc0001863.1_g000030 Rmu_sc0001891.1_g000056 Rmu_sc0001891.1_g000057 Rmu_sc0001891.1_g000058 Rmu_sc0001940.1_g000032 Rmu_sc0001966.1_g000020 Rmu_sc0001982.1_g000009 Rmu_sc0001998.1_g000020 Rmu_sc0001998.1_g000021 Rmu_sc0002000.1_g000008 Rmu_sc0002023.1_g000013 Rmu_sc0002038.1_g000015 Rmu_sc0002038.1_g000016 Rmu_sc0002043.1_g000008 Rmu_sc0002063.1_g000010 Rmu_sc0002094.1_g000035 Rmu_sc0002099.1_g000007 Rmu_sc0002300.1_g000012 Rmu_sc0002316.1_g000063 Rmu_sc0002485.1_g000006 Rmu_sc0002520.1_g000010 Rmu_sc0002539.1_g000041 Rmu_sc0002665.1_g000012 Rmu_sc0002858.1_g000005 Rmu_sc0002882.1_g000038 Rmu_sc0002882.1_g000039 Rmu_sc0002890.1_g000016 Rmu_sc0002931.1_g000024 Rmu_sc0002942.1_g000022 Rmu_sc0003002.1_g000051 Rmu_sc0003012.1_g000030 Rmu_sc0003147.1_g000014 Rmu_sc0003156.1_g000006 Rmu_sc0003162.1_g000006 Rmu_sc0003261.1_g000027 Rmu_sc0003399.1_g000008 Rmu_sc0003500.1_g000004 Rmu_sc0003514.1_g000006 Rmu_sc0003764.1_g000013 Rmu_sc0003764.1_g000014 Rmu_sc0003764.1_g000015 Rmu_sc0003776.1_g000039 Rmu_sc0003829.1_g000001 Rmu_sc0003834.1_g000016 Rmu_sc0003834.1_g000017 Rmu_sc0003834.1_g000019 Rmu_sc0003834.1_g000020 Rmu_sc0003929.1_g000011 Rmu_sc0004003.1_g000002 Rmu_sc0004005.1_g000002 Rmu_sc0004240.1_g000001 Rmu_sc0004240.1_g000002 Rmu_sc0004340.1_g000023 Rmu_sc0004373.1_g000008 Rmu_sc0004373.1_g000009 Rmu_sc0004413.1_g000030 Rmu_sc0004467.1_g000011 Rmu_sc0004473.1_g000010 Rmu_sc0004577.1_g000023 Rmu_sc0004596.1_g000040 Rmu_sc0004711.1_g000024 Rmu_sc0004714.1_g000005 Rmu_sc0004720.1_g000012 Rmu_sc0004730.1_g000002 Rmu_sc0004733.1_g000004 Rmu_sc0004763.1_g000001 Rmu_sc0004768.1_g000010 Rmu_sc0004889.1_g000007 Rmu_sc0004889.1_g000008 Rmu_sc0004904.1_g000005 Rmu_sc0004961.1_g000003 Rmu_sc0004961.1_g000009 Rmu_sc0004990.1_g000007 Rmu_sc0005104.1_g000004 Rmu_sc0005122.1_g000016 Rmu_sc0005122.1_g000017 Rmu_sc0005229.1_g000013 Rmu_sc0005308.1_g000009 Rmu_sc0005363.1_g000010 Rmu_sc0005363.1_g000011 Rmu_sc0005382.1_g000001 Rmu_sc0005389.1_g000023 Rmu_sc0005514.1_g000008 Rmu_sc0005593.1_g000014 Rmu_sc0005705.1_g000010 Rmu_sc0005722.1_g000010 Rmu_sc0005745.1_g000027 Rmu_sc0005745.1_g000028 Rmu_sc0005802.1_g000023 Rmu_sc0005899.1_g000002 Rmu_sc0005952.1_g000001 Rmu_sc0005978.1_g000007 Rmu_sc0006158.1_g000001 Rmu_sc0006233.1_g000035 Rmu_sc0006343.1_g000009 Rmu_sc0006367.1_g000005 Rmu_sc0006444.1_g000007 Rmu_sc0006445.1_g000017 Rmu_sc0006493.1_g000015 Rmu_sc0006552.1_g000002 Rmu_sc0006695.1_g000054 Rmu_sc0006720.1_g000006 Rmu_sc0006722.1_g000015 Rmu_sc0007029.1_g000016 Rmu_sc0007080.1_g000001 Rmu_sc0007328.1_g000007 Rmu_sc0007341.1_g000003 Rmu_sc0007366.1_g000006 Rmu_sc0007421.1_g000003 Rmu_sc0007652.1_g000013 Rmu_sc0007716.1_g000002 Rmu_sc0007790.1_g000016 Rmu_sc0007802.1_g000002 Rmu_sc0008049.1_g000037 Rmu_sc0008087.1_g000009 Rmu_sc0008509.1_g000006 Rmu_sc0008676.1_g000002 Rmu_sc0008800.1_g000012 Rmu_sc0009053.1_g000003 Rmu_sc0009053.1_g000004 Rmu_sc0009241.1_g000002 Rmu_sc0009538.1_g000016 Rmu_sc0009568.1_g000001 Rmu_sc0009579.1_g000014 Rmu_sc0009742.1_g000001 Rmu_sc0009895.1_g000025 Rmu_sc0010202.1_g000006 Rmu_sc0010334.1_g000001 Rmu_sc0010483.1_g000022 Rmu_sc0010901.1_g000001 Rmu_sc0010937.1_g000008 Rmu_sc0011079.1_g000001 Rmu_sc0011173.1_g000012 Rmu_sc0011609.1_g000001 Rmu_sc0011698.1_g000013 Rmu_sc0011778.1_g000018 Rmu_sc0012115.1_g000006 Rmu_sc0012403.1_g000018 Rmu_sc0012426.1_g000003 Rmu_sc0012426.1_g000004 Rmu_sc0012705.1_g000001 Rmu_sc0012897.1_g000003 Rmu_sc0013014.1_g000009 Rmu_sc0013188.1_g000003 Rmu_sc0013612.1_g000007 Rmu_sc0013612.1_g000008 Rmu_sc0014076.1_g000002 Rmu_sc0014162.1_g000018 Rmu_sc0014206.1_g000008 Rmu_sc0014426.1_g000003 Rmu_sc0015447.1_g000006 Rmu_sc0016197.1_g000003 Rmu_sc0016546.1_g000001 Rmu_sc0016546.1_g000002 Rmu_sc0017848.1_g000001 Rmu_sc0017848.1_g000002 Rmu_sc0018300.1_g000001 Rmu_sc0018325.1_g000008 Rmu_sc0019396.1_g000002 Rmu_sc0019815.1_g000003 Rmu_sc0022463.1_g000004 Rmu_sc0023070.1_g000009 Rmu_sc0023965.1_g000004 Rmu_sc0024072.1_g000004 Rmu_sc0024195.1_g000017 Rmu_sc0024446.1_g000004 Rmu_sc0026134.1_g000001 Rmu_sc0026279.1_g000001 Rmu_sc0026736.1_g000001 Rmu_sc0027357.1_g000001 Rmu_sc0027357.1_g000002 Rmu_sc0027596.1_g000001 Rmu_sc0027596.1_g000002 Rmu_sc0027778.1_g000005 Rmu_sc0027873.1_g000001 Rmu_sc0028295.1_g000001 Rmu_sc0028706.1_g000002 Rmu_sc0034015.1_g000001 Rmu_sc0034598.1_g000002 Rmu_sc0035534.1_g000001 Rmu_sc0036127.1_g000001 Rmu_sc0036172.1_g000001 Rmu_sc0036279.1_g000002 Rmu_sc0036593.1_g000001 Rmu_sc0036891.1_g000001 Rmu_sc0041752.1_g000001 Rmu_sc0041761.1_g000001 Rmu_sc0042299.1_g000001 Rmu_sc0042653.1_g000003 Rmu_ssc0000011.1_g000004 Rmu_ssc0000035.1_g000004 Rmu_ssc0000064.1_g000029 Rmu_ssc0000201.1_g000005 Rmu_ssc0000201.1_g000010 Rmu_ssc0000201.1_g000011 Rmu_ssc0000342.1_g000008 Rmu_ssc0000342.1_g000019 Rmu_ssc0000381.1_g000002 Rmu_ssc0000432.1_g000083
rosa_roxburghii Rroxscaffold_1G00000890 Rroxscaffold_1G00045620 Rroxscaffold_1G00061860 Rroxscaffold_4G00303310 Rroxscaffold_4G00331420 Rroxscaffold_6G00406060
rosa_rugosa Rorug01G0072600 Rorug01G0113600 Rorug01G0113700 Rorug01G0167100 Rorug01G0199300 Rorug01G0274300 Rorug01G0312600 Rorug01G0383700 Rorug02G0026100.1 Rorug02G0173700 Rorug02G0211900 Rorug02G0212100 Rorug02G0341000 Rorug02G0634200 Rorug03G0098500 Rorug03G0106400 Rorug03G0144900 Rorug03G0145000 Rorug03G0155700 Rorug03G0155800 Rorug03G0170300 Rorug03G0184200 Rorug03G0213700 Rorug03G0229300 Rorug03G0232700.1 Rorug03G0232800 Rorug03G0324800 Rorug03G0334900 Rorug04G0049700 Rorug04G0067800 Rorug04G0197400 Rorug04G0235600 Rorug05G0038600 Rorug05G0081400 Rorug05G0089200 Rorug05G0157400 Rorug05G0157900 Rorug05G0157900 Rorug05G0186600 Rorug05G0214300 Rorug05G0267700 Rorug05G0309100 Rorug05G0370800 Rorug05G0419000 Rorug05G0515800 Rorug06G0040600 Rorug06G0069100 Rorug06G0142200 Rorug06G0142800 Rorug06G0144400 Rorug06G0276500 Rorug06G0444200 Rorug06G0495800 Rorug07G0017900 Rorug07G0030300 Rorug07G0031900 Rorug07G0032000 Rorug07G0051000 Rorug07G0053700 Rorug07G0116200 Rorug07G0164400 Rorug07G0236200 Rorug07G0308600 Rorug07G0313900
rosa_samantha Rh1CG051600 Rh1CG098200 Rh1CG101900 Rh1DG109900 Rh2BG354600 Rh2CG366900 Rh2DG048400 Rh2DG464500 Rh2DG484000 Rh3AG277100 Rh3AG286800 Rh3BG229500 Rh3DG264200 Rh4BG155600 Rh5AG127200 Rh5AG520800 Rh5BG116100 Rh6DG091200 Rh6DG091300 Rh7AG106700 Rh7AG343500 Rh7BG179600 Rh7BG337400 Rh7CG299700
rosa_wichuraiana Rw1G026260 Rw5G047800 Rw6G003270 Rw6G025380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 161
AccB1I GGYRCC 1 cut(s) 161
AccI GTMKAC 1 cut(s) 1566
AccIII TCCGGA 1 cut(s) 1231
AciI CCGC 1 cut(s) 1962
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 5 cut(s) 496, 563, 1643, 1968, 2125
AcuI CTGAAG 2 cut(s) 108, 668
AdeI CACNNNGTG 1 cut(s) 1349
AfaI GTAC 5 cut(s) 163, 194, 1049, 1443, 1748
AfeI AGCGCT 1 cut(s) 412
AfiI CCNNNNNNNGG 3 cut(s) 557, 653, 1238
AjnI CCWGG 6 cut(s) 90, 157, 253, 1874, 2000, 2374
Alw26I GTCTC 5 cut(s) 346, 1179, 1603, 2037, 2495
Ama87I CYCGRG 2 cut(s) 1472, 1845
Aor13HI TCCGGA 1 cut(s) 1231
Aor51HI AGCGCT 1 cut(s) 412
AoxI GGCC 5 cut(s) 127, 228, 584, 644, 1633
ApeKI GCWGC 3 cut(s) 370, 413, 2287
ApoI RAATTY 5 cut(s) 496, 563, 1643, 1968, 2125
AseI ATTAAT 1 cut(s) 1386
Asp700I GAANNNNTTC 2 cut(s) 2125, 2394
Asp718I GGTACC 1 cut(s) 161
AspLEI GCGC 1 cut(s) 413
AspS9I GGNCC 7 cut(s) 580, 644, 893, 920, 1468, 1633, 1768
AsuHPI GGTGA 4 cut(s) 862, 951, 1318, 2132
AsuII TTCGAA 1 cut(s) 1258
AsuNHI GCTAGC 1 cut(s) 19
AvaI CYCGRG 2 cut(s) 1472, 1845
AvaII GGWCC 5 cut(s) 580, 893, 920, 1468, 1768
BaeI ACNNNNGTAYC 6 cut(s) 102, 135, 145, 178, 1841, 1874
BalI TGGCCA 1 cut(s) 230
BanI GGYRCC 1 cut(s) 161
BbsI GAAGAC 3 cut(s) 36, 1406, 1795
BbvI GCAGC 3 cut(s) 382, 400, 2299
BccI CCATC 7 cut(s) 633, 647, 788, 869, 1002, 1028, 2290
BciT130I CCWGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
BclI TGATCA 1 cut(s) 589
BcoDI GTCTC 5 cut(s) 346, 1179, 1603, 2037, 2495
BfmI CTRYAG 2 cut(s) 414, 1527
BfoI RGCGCY 1 cut(s) 414
BglII AGATCT 1 cut(s) 1897
BisI GCNGC 3 cut(s) 371, 414, 2288
BlsI GCNGC 3 cut(s) 372, 415, 2289
Bme1390I CCNGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
Bme18I GGWCC 5 cut(s) 580, 893, 920, 1468, 1768
BmeT110I CYCGRG 2 cut(s) 1472, 1845
BmgT120I GGNCC 7 cut(s) 580, 644, 893, 920, 1468, 1633, 1768
BmiI GGNNCC 3 cut(s) 163, 645, 1960
BmrFI CCNGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
BmsI GCATC 7 cut(s) 409, 1282, 1344, 1389, 1697, 2206, 2346
BmtI GCTAGC 1 cut(s) 23
BpiI GAAGAC 3 cut(s) 36, 1406, 1795
BplI GAGNNNNNCTC 2 cut(s) 1508, 1540
BpmI CTGGAG 6 cut(s) 249, 526, 1011, 1858, 2019, 2480
Bpu10I CCTNAGC 1 cut(s) 2145
Bpu14I TTCGAA 1 cut(s) 1258
BpuEI CTTGAG 2 cut(s) 418, 1091
BsaJI CCNNGG 3 cut(s) 157, 647, 2400
BsaWI WCCGGW 5 cut(s) 516, 557, 694, 1231, 1683
BsaXI ACNNNNNCTCC 8 cut(s) 811, 841, 984, 1014, 1176, 1206, 1620, 1650
Bsc4I CCNNNNNNNGG 3 cut(s) 557, 653, 1238
Bse118I RCCGGY 1 cut(s) 582
Bse1I ACTGG 3 cut(s) 109, 543, 994
Bse3DI GCAATG 2 cut(s) 1284, 2201
BseAI TCCGGA 1 cut(s) 1231
BseBI CCWGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
BseDI CCNNGG 3 cut(s) 157, 647, 2400
BseGI GGATG 8 cut(s) 658, 1240, 1249, 1359, 1712, 2221, 2301, 2305
BseLI CCNNNNNNNGG 3 cut(s) 557, 653, 1238
BseMI GCAATG 2 cut(s) 1284, 2201
BseMII CTCAG 6 cut(s) 614, 615, 1360, 1506, 1871, 2136
BseNI ACTGG 3 cut(s) 109, 543, 994
BseRI GAGGAG 4 cut(s) 692, 1423, 1532, 2483
BseXI GCAGC 3 cut(s) 382, 400, 2299
BsgI GTGCAG 1 cut(s) 2306
BshFI GGCC 5 cut(s) 129, 230, 586, 646, 1635
BshNI GGYRCC 1 cut(s) 161
BsiHKCI CYCGRG 2 cut(s) 1472, 1845
BsiSI CCGG 8 cut(s) 476, 517, 558, 583, 695, 1067, 1232, 1684
BslFI GGGAC 2 cut(s) 345, 1025
BslI CCNNNNNNNGG 3 cut(s) 557, 653, 1238
BsmAI GTCTC 5 cut(s) 346, 1179, 1603, 2037, 2495
BsmFI GGGAC 2 cut(s) 345, 1025
BsmI GAATGC 2 cut(s) 1033, 1621
BsnI GGCC 5 cut(s) 129, 230, 586, 646, 1635
BsoBI CYCGRG 2 cut(s) 1472, 1845
Bsp119I TTCGAA 1 cut(s) 1258
Bsp13I TCCGGA 1 cut(s) 1231
Bsp143I GATC 4 cut(s) 393, 589, 1897, 2010
Bsp19I CCATGG 1 cut(s) 2400
BspACI CCGC 1 cut(s) 1962
BspANI GGCC 5 cut(s) 129, 230, 586, 646, 1635
BspCNI CTCAG 6 cut(s) 613, 616, 1359, 1507, 1872, 2137
BspEI TCCGGA 1 cut(s) 1231
BspLI GGNNCC 3 cut(s) 163, 645, 1960
BspMAI CTGCAG 1 cut(s) 418
BspOI GCTAGC 1 cut(s) 23
BspQI GCTCTTC 1 cut(s) 292
BspT104I TTCGAA 1 cut(s) 1258
BspT107I GGYRCC 1 cut(s) 161
BsrDI GCAATG 2 cut(s) 1284, 2201
BsrFI RCCGGY 1 cut(s) 582
BsrI ACTGG 3 cut(s) 109, 543, 994
BssAI RCCGGY 1 cut(s) 582
BssECI CCNNGG 3 cut(s) 157, 647, 2400
BssMI GATC 4 cut(s) 393, 589, 1897, 2010
BssNAI GTATAC 1 cut(s) 1567
BssT1I CCWWGG 2 cut(s) 647, 2400
Bst1107I GTATAC 1 cut(s) 1567
Bst2UI CCWGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
Bst4CI ACNGT 7 cut(s) 217, 1139, 1190, 1614, 1821, 1928, 2323
Bst6I CTCTTC 4 cut(s) 292, 723, 1458, 1601
BstBI TTCGAA 1 cut(s) 1258
BstC8I GCNNGC 2 cut(s) 21, 1909
BstDEI CTNAG 8 cut(s) 600, 624, 1296, 1346, 1515, 1880, 2145, 2486
BstDSI CCRYGG 1 cut(s) 2400
BstF5I GGATG 8 cut(s) 658, 1240, 1249, 1359, 1712, 2221, 2301, 2305
BstH2I RGCGCY 1 cut(s) 414
BstHHI GCGC 1 cut(s) 413
BstKTI GATC 4 cut(s) 396, 592, 1900, 2013
BstMAI GTCTC 5 cut(s) 346, 1179, 1603, 2037, 2495
BstMBI GATC 4 cut(s) 393, 589, 1897, 2010
BstMWI GCNNNNNNNGC 1 cut(s) 419
BstNI CCWGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
BstNSI RCATGY 1 cut(s) 2174
BstSCI CCNGG 6 cut(s) 90, 157, 253, 1874, 2000, 2374
BstSFI CTRYAG 2 cut(s) 414, 1527
BstV1I GCAGC 3 cut(s) 382, 400, 2299
BstV2I GAAGAC 3 cut(s) 36, 1406, 1795
BstX2I RGATCY 1 cut(s) 1897
BstXI CCANNNNNNTGG 1 cut(s) 969
BstYI RGATCY 1 cut(s) 1897
BstZ17I GTATAC 1 cut(s) 1567
BsuRI GGCC 5 cut(s) 129, 230, 586, 646, 1635
BtgI CCRYGG 1 cut(s) 2400
BtsCI GGATG 8 cut(s) 658, 1240, 1249, 1359, 1712, 2221, 2301, 2305
BtsI GCAGTG 2 cut(s) 730, 1608
BtsIMutI CAGTG 9 cut(s) 213, 550, 673, 730, 842, 1354, 1608, 1623, 1933
Cac8I GCNNGC 2 cut(s) 21, 1909
CfoI GCGC 1 cut(s) 413
Cfr10I RCCGGY 1 cut(s) 582
Cfr13I GGNCC 7 cut(s) 580, 644, 893, 920, 1468, 1633, 1768
CsiI ACCWGGT 2 cut(s) 90, 2374
Csp6I GTAC 5 cut(s) 162, 193, 1048, 1442, 1747
CviAII CATG 6 cut(s) 531, 1336, 2150, 2171, 2175, 2401
CviQI GTAC 5 cut(s) 162, 193, 1048, 1442, 1747
DdeI CTNAG 8 cut(s) 600, 624, 1296, 1346, 1515, 1880, 2145, 2486
DpnI GATC 4 cut(s) 395, 591, 1899, 2012
DpnII GATC 4 cut(s) 393, 589, 1897, 2010
DraI TTTAAA 1 cut(s) 513
DraIII CACNNNGTG 1 cut(s) 1349
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 4 cut(s) 292, 723, 1458, 1601
EarI CTCTTC 4 cut(s) 292, 723, 1458, 1601
Eco130I CCWWGG 2 cut(s) 647, 2400
Eco47I GGWCC 5 cut(s) 580, 893, 920, 1468, 1768
Eco47III AGCGCT 1 cut(s) 412
Eco57I CTGAAG 2 cut(s) 108, 668
Eco88I CYCGRG 2 cut(s) 1472, 1845
EcoO109I RGGNCCY 4 cut(s) 644, 920, 1468, 1633
EcoRI GAATTC 2 cut(s) 1643, 2125
EcoRII CCWGG 6 cut(s) 90, 157, 253, 1874, 2000, 2374
EcoT14I CCWWGG 2 cut(s) 647, 2400
EcoT22I ATGCAT 1 cut(s) 2176
ErhI CCWWGG 2 cut(s) 647, 2400
FaeI CATG 6 cut(s) 534, 1339, 2153, 2174, 2178, 2404
FalI AAGNNNNNCTT 2 cut(s) 2259, 2291
FaqI GGGAC 2 cut(s) 345, 1025
FatI CATG 6 cut(s) 530, 1335, 2149, 2170, 2174, 2400
FauNDI CATATG 1 cut(s) 2020
FbaI TGATCA 1 cut(s) 589
FblI GTMKAC 1 cut(s) 1566
Fnu4HI GCNGC 3 cut(s) 371, 414, 2288
FokI GGATG 8 cut(s) 665, 1247, 1256, 1366, 1719, 2228, 2308, 2312
Fsp4HI GCNGC 3 cut(s) 371, 414, 2288
GlaI GCGC 1 cut(s) 412
GluI GCNGC 3 cut(s) 371, 414, 2288
GsuI CTGGAG 6 cut(s) 249, 526, 1011, 1858, 2019, 2480
HaeII RGCGCY 1 cut(s) 414
HaeIII GGCC 5 cut(s) 129, 230, 586, 646, 1635
HapII CCGG 8 cut(s) 476, 517, 558, 583, 695, 1067, 1232, 1684
HhaI GCGC 1 cut(s) 413
Hin1II CATG 6 cut(s) 534, 1339, 2153, 2174, 2178, 2404
Hin6I GCGC 1 cut(s) 411
HinP1I GCGC 1 cut(s) 411
HincII GTYRAC 1 cut(s) 2319
HindII GTYRAC 1 cut(s) 2319
HindIII AAGCTT 1 cut(s) 1673
HpaII CCGG 8 cut(s) 476, 517, 558, 583, 695, 1067, 1232, 1684
HphI GGTGA 4 cut(s) 862, 951, 1318, 2132
Hpy166II GTNNAC 4 cut(s) 1444, 1567, 2054, 2319
Hpy188I TCNGA 8 cut(s) 111, 393, 625, 662, 1392, 1951, 2015, 2074
Hpy8I GTNNAC 4 cut(s) 1444, 1567, 2054, 2319
HpyAV CCTTC 6 cut(s) 1232, 1593, 1760, 2186, 2285, 2489
HpyCH4III ACNGT 7 cut(s) 217, 1139, 1190, 1614, 1821, 1928, 2323
HpyF10VI GCNNNNNNNGC 1 cut(s) 419
HpyF3I CTNAG 8 cut(s) 600, 624, 1296, 1346, 1515, 1880, 2145, 2486
Hsp92II CATG 6 cut(s) 534, 1339, 2153, 2174, 2178, 2404
HspAI GCGC 1 cut(s) 411
Kpn2I TCCGGA 1 cut(s) 1231
KpnI GGTACC 1 cut(s) 165
Ksp22I TGATCA 1 cut(s) 589
Kzo9I GATC 4 cut(s) 393, 589, 1897, 2010
LguI GCTCTTC 1 cut(s) 292
LmnI GCTCC 2 cut(s) 679, 955
Lsp1109I GCAGC 3 cut(s) 382, 400, 2299
LweI GCATC 7 cut(s) 409, 1282, 1344, 1389, 1697, 2206, 2346
MabI ACCWGGT 2 cut(s) 90, 2374
MalI GATC 4 cut(s) 395, 591, 1899, 2012
MboI GATC 4 cut(s) 393, 589, 1897, 2010
MfeI CAATTG 1 cut(s) 63
MflI RGATCY 1 cut(s) 1897
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 7 cut(s) 323, 666, 697, 905, 1289, 1845, 1865
Mox20I TGGCCA 1 cut(s) 230
Mph1103I ATGCAT 1 cut(s) 2176
MroI TCCGGA 1 cut(s) 1231
MroXI GAANNNNTTC 2 cut(s) 2125, 2394
MscI TGGCCA 1 cut(s) 230
MseI TTAA 6 cut(s) 353, 512, 770, 858, 1386, 2450
MslI CAYNNNNRTG 3 cut(s) 967, 1334, 1832
Msp20I TGGCCA 1 cut(s) 230
MspI CCGG 8 cut(s) 476, 517, 558, 583, 695, 1067, 1232, 1684
MspR9I CCNGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
MssI GTTTAAAC 1 cut(s) 513
MunI CAATTG 1 cut(s) 63
Mva1269I GAATGC 2 cut(s) 1033, 1621
MvaI CCWGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
MwoI GCNNNNNNNGC 1 cut(s) 419
NcoI CCATGG 1 cut(s) 2400
NdeI CATATG 1 cut(s) 2020
NdeII GATC 4 cut(s) 393, 589, 1897, 2010
NheI GCTAGC 1 cut(s) 19
NlaIII CATG 6 cut(s) 534, 1339, 2153, 2174, 2178, 2404
NlaIV GGNNCC 3 cut(s) 163, 645, 1960
NmeAIII GCCGAG 1 cut(s) 779
NmuCI GTSAC 7 cut(s) 502, 545, 850, 908, 957, 1324, 2251
NsiI ATGCAT 1 cut(s) 2176
NspI RCATGY 1 cut(s) 2174
NspV TTCGAA 1 cut(s) 1258
PaeR7I CTCGAG 2 cut(s) 1472, 1845
PciSI GCTCTTC 1 cut(s) 292
PcsI WCGNNNNNNNCGW 1 cut(s) 296
PctI GAATGC 2 cut(s) 1033, 1621
PdmI GAANNNNTTC 2 cut(s) 2125, 2394
PfeI GAWTC 5 cut(s) 663, 787, 1687, 1773, 2179
PflFI GACNNNGTC 1 cut(s) 2314
PkrI GCNGC 3 cut(s) 372, 415, 2289
PleI GAGTC 7 cut(s) 322, 665, 697, 905, 1288, 1845, 1865
PmeI GTTTAAAC 1 cut(s) 513
PpsI GAGTC 7 cut(s) 322, 665, 697, 905, 1288, 1845, 1865
PpuMI RGGWCCY 2 cut(s) 920, 1468
PshBI ATTAAT 1 cut(s) 1386
Psp5II RGGWCCY 2 cut(s) 920, 1468
Psp6I CCWGG 6 cut(s) 90, 157, 253, 1874, 2000, 2374
PspGI CCWGG 6 cut(s) 90, 157, 253, 1874, 2000, 2374
PspN4I GGNNCC 3 cut(s) 163, 645, 1960
PspPI GGNCC 7 cut(s) 580, 644, 893, 920, 1468, 1633, 1768
PspPPI RGGWCCY 2 cut(s) 920, 1468
PspXI VCTCGAGB 2 cut(s) 1472, 1845
PstI CTGCAG 1 cut(s) 418
PsuI RGATCY 1 cut(s) 1897
PsyI GACNNNGTC 1 cut(s) 2314
RsaI GTAC 5 cut(s) 163, 194, 1049, 1443, 1748
RsaNI GTAC 5 cut(s) 162, 193, 1048, 1442, 1747
RseI CAYNNNNRTG 3 cut(s) 967, 1334, 1832
SapI GCTCTTC 1 cut(s) 292
SaqAI TTAA 6 cut(s) 353, 512, 770, 858, 1386, 2450
SatI GCNGC 3 cut(s) 371, 414, 2288
Sau3AI GATC 4 cut(s) 393, 589, 1897, 2010
Sau96I GGNCC 7 cut(s) 580, 644, 893, 920, 1468, 1633, 1768
SchI GAGTC 7 cut(s) 323, 666, 697, 905, 1289, 1845, 1865
ScrFI CCNGG 6 cut(s) 92, 159, 255, 1876, 2002, 2376
SexAI ACCWGGT 2 cut(s) 90, 2374
SfaNI GCATC 7 cut(s) 409, 1282, 1344, 1389, 1697, 2206, 2346
SfcI CTRYAG 2 cut(s) 414, 1527
Sfr274I CTCGAG 2 cut(s) 1472, 1845
SfuI TTCGAA 1 cut(s) 1258
SinI GGWCC 5 cut(s) 580, 893, 920, 1468, 1768
SlaI CTCGAG 2 cut(s) 1472, 1845
SmiMI CAYNNNNRTG 3 cut(s) 967, 1334, 1832
SmlI CTYRAG 4 cut(s) 397, 1106, 1472, 1845
SmoI CTYRAG 4 cut(s) 397, 1106, 1472, 1845
SsiI CCGC 1 cut(s) 1962
SspI AATATT 1 cut(s) 202
StyD4I CCNGG 6 cut(s) 90, 157, 253, 1874, 2000, 2374
StyI CCWWGG 2 cut(s) 647, 2400
TaaI ACNGT 7 cut(s) 217, 1139, 1190, 1614, 1821, 1928, 2323
TaqI TCGA 5 cut(s) 299, 1258, 1473, 1846, 1940
TaqII GACCGA 2 cut(s) 1785, 2323
TatI WGTACW 1 cut(s) 1441
TfiI GAWTC 5 cut(s) 663, 787, 1687, 1773, 2179
Tru1I TTAA 6 cut(s) 353, 512, 770, 858, 1386, 2450
Tru9I TTAA 6 cut(s) 353, 512, 770, 858, 1386, 2450
TscAI CASTG 9 cut(s) 220, 550, 673, 730, 842, 1354, 1608, 1623, 1933
TseFI GTSAC 7 cut(s) 502, 545, 850, 908, 957, 1324, 2251
TseI GCWGC 3 cut(s) 370, 413, 2287
Tsp45I GTSAC 7 cut(s) 502, 545, 850, 908, 957, 1324, 2251
TspGWI ACGGA 1 cut(s) 2308
TspRI CASTG 9 cut(s) 220, 550, 673, 730, 842, 1354, 1608, 1623, 1933
Tth111I GACNNNGTC 1 cut(s) 2314
VpaK11BI GGWCC 5 cut(s) 580, 893, 920, 1468, 1768
VspI ATTAAT 1 cut(s) 1386
XapI RAATTY 5 cut(s) 496, 563, 1643, 1968, 2125
XceI RCATGY 1 cut(s) 2174
XcmI CCANNNNNNNNNTGG 1 cut(s) 1762
XhoI CTCGAG 2 cut(s) 1472, 1845
XmiI GTMKAC 1 cut(s) 1566
XmnI GAANNNNTTC 2 cut(s) 2125, 2394
Zsp2I ATGCAT 1 cut(s) 2176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.