Serine threonine-protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| IMS | PF00817 | 17 - 222 | 1.5e-40 | impB/mucB/samB family |
| POLH-Rev1_HhH | PF21704 | 245 - 300 | 5.4e-24 | DNApol eta/Rev1, HhH motif |
| IMS_HHH_1 | PF21999 | 256 - 300 | 4.9e-06 | DNA polymerase-iota, thumb domain |
| IMS_C | PF11799 | 311 - 438 | 2.2e-09 | impB/mucB/samB family C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2033 |
| Acc36I | ACCTGC | 1 cut(s) | 688 |
| Acc65I | GGTACC | 1 cut(s) | 869 |
| AccB1I | GGYRCC | 2 cut(s) | 869, 921 |
| AccI | GTMKAC | 2 cut(s) | 51, 1729 |
| AccIII | TCCGGA | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 2098 |
| AclWI | GGATC | 2 cut(s) | 1796, 1911 |
| AcoI | YGGCCR | 1 cut(s) | 1710 |
| AcsI | RAATTY | 5 cut(s) | 237, 611, 1598, 1678, 2058 |
| AcuI | CTGAAG | 3 cut(s) | 426, 1410, 1866 |
| AcvI | CACGTG | 1 cut(s) | 266 |
| AcyI | GRCGYC | 1 cut(s) | 922 |
| AfaI | GTAC | 2 cut(s) | 126, 871 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 879, 1427, 1631, 1931, 2085 |
| AflIII | ACRYGT | 2 cut(s) | 457, 1831 |
| AhlI | ACTAGT | 1 cut(s) | 1081 |
| AjnI | CCWGG | 6 cut(s) | 792, 872, 961, 1717, 1948, 2078 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 286, 318 |
| Alw21I | GWGCWC | 1 cut(s) | 1966 |
| Alw26I | GTCTC | 1 cut(s) | 599 |
| Alw44I | GTGCAC | 1 cut(s) | 1962 |
| AlwI | GGATC | 2 cut(s) | 1796, 1911 |
| Aor13HI | TCCGGA | 1 cut(s) | 94 |
| AoxI | GGCC | 6 cut(s) | 174, 1107, 1710, 1873, 1934, 2087 |
| ApaLI | GTGCAC | 1 cut(s) | 1962 |
| ApeKI | GCWGC | 4 cut(s) | 386, 1169, 1208, 1861 |
| ApoI | RAATTY | 5 cut(s) | 237, 611, 1598, 1678, 2058 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1038, 1133, 1330, 1771 |
| Asp718I | GGTACC | 1 cut(s) | 869 |
| AspLEI | GCGC | 2 cut(s) | 924, 1414 |
| AspS9I | GGNCC | 5 cut(s) | 175, 247, 965, 1874, 1934 |
| AsuC2I | CCSGG | 1 cut(s) | 178 |
| AsuHPI | GGTGA | 1 cut(s) | 1700 |
| AsuII | TTCGAA | 1 cut(s) | 1941 |
| AvaII | GGWCC | 2 cut(s) | 247, 965 |
| AxyI | CCTNAGG | 3 cut(s) | 969, 1157, 1630 |
| BaeGI | GKGCMC | 1 cut(s) | 1966 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1051, 1084 |
| BalI | TGGCCA | 1 cut(s) | 1712 |
| BanI | GGYRCC | 2 cut(s) | 869, 921 |
| BanII | GRGCYC | 1 cut(s) | 568 |
| BbrPI | CACGTG | 1 cut(s) | 266 |
| BbsI | GAAGAC | 5 cut(s) | 959, 986, 1031, 1539, 1698 |
| Bbv12I | GWGCWC | 1 cut(s) | 1966 |
| BbvI | GCAGC | 4 cut(s) | 398, 1156, 1195, 1848 |
| BccI | CCATC | 4 cut(s) | 1327, 1372, 1505, 1813 |
| BceAI | ACGGC | 1 cut(s) | 132 |
| BciT130I | CCWGG | 6 cut(s) | 794, 874, 963, 1719, 1950, 2080 |
| BcnI | CCSGG | 1 cut(s) | 178 |
| BcoDI | GTCTC | 1 cut(s) | 599 |
| BcuI | ACTAGT | 1 cut(s) | 1081 |
| BfaI | CTAG | 9 cut(s) | 593, 725, 1082, 1515, 1826, 1884, 1959, 1968, 2124 |
| BfmI | CTRYAG | 1 cut(s) | 842 |
| BfoI | RGCGCY | 1 cut(s) | 925 |
| BfuAI | ACCTGC | 1 cut(s) | 688 |
| BisI | GCNGC | 5 cut(s) | 387, 1170, 1209, 1862, 2099 |
| BlsI | GCNGC | 5 cut(s) | 388, 1171, 1210, 1863, 2100 |
| Bme1390I | CCNGG | 7 cut(s) | 178, 794, 874, 963, 1719, 1950, 2080 |
| Bme18I | GGWCC | 2 cut(s) | 247, 965 |
| BmgT120I | GGNCC | 5 cut(s) | 175, 247, 965, 1874, 1934 |
| BmiI | GGNNCC | 3 cut(s) | 871, 923, 1768 |
| BmrFI | CCNGG | 7 cut(s) | 178, 794, 874, 963, 1719, 1950, 2080 |
| BmrI | ACTGGG | 1 cut(s) | 251 |
| BmsI | GCATC | 5 cut(s) | 373, 636, 1177, 1531, 1840 |
| BmuI | ACTGGG | 1 cut(s) | 251 |
| BpiI | GAAGAC | 5 cut(s) | 959, 986, 1031, 1539, 1698 |
| BpmI | CTGGAG | 2 cut(s) | 399, 1754 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2084 |
| Bpu14I | TTCGAA | 1 cut(s) | 1941 |
| BpuEI | CTTGAG | 1 cut(s) | 434 |
| BpuMI | CCSGG | 1 cut(s) | 178 |
| BsaAI | YACGTR | 2 cut(s) | 266, 1217 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1908 |
| BsaHI | GRCGYC | 1 cut(s) | 922 |
| BsaJI | CCNNGG | 4 cut(s) | 793, 940, 1249, 1949 |
| BsaWI | WCCGGW | 2 cut(s) | 94, 291 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 879, 1427, 1631, 1931, 2085 |
| Bse118I | RCCGGY | 1 cut(s) | 299 |
| Bse1I | ACTGG | 7 cut(s) | 5, 257, 871, 1007, 1110, 1533, 1737 |
| Bse21I | CCTNAGG | 3 cut(s) | 969, 1157, 1630 |
| Bse3DI | GCAATG | 3 cut(s) | 39, 630, 2127 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1908 |
| BseAI | TCCGGA | 1 cut(s) | 94 |
| BseBI | CCWGG | 6 cut(s) | 794, 874, 963, 1719, 1950, 2080 |
| BseDI | CCNNGG | 4 cut(s) | 793, 940, 1249, 1949 |
| BseGI | GGATG | 3 cut(s) | 1060, 1280, 1364 |
| BseJI | GATNNNNATC | 1 cut(s) | 1908 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 879, 1427, 1631, 1931, 2085 |
| BseMI | GCAATG | 3 cut(s) | 39, 630, 2127 |
| BseMII | CTCAG | 6 cut(s) | 204, 983, 1644, 1662, 1892, 2098 |
| BseNI | ACTGG | 7 cut(s) | 5, 257, 871, 1007, 1110, 1533, 1737 |
| BseRI | GAGGAG | 2 cut(s) | 402, 452 |
| BseSI | GKGCMC | 1 cut(s) | 1966 |
| BseXI | GCAGC | 4 cut(s) | 398, 1156, 1195, 1848 |
| BseYI | CCCAGC | 1 cut(s) | 769 |
| BsgI | GTGCAG | 1 cut(s) | 666 |
| BshFI | GGCC | 6 cut(s) | 176, 1109, 1712, 1875, 1936, 2089 |
| BshNI | GGYRCC | 2 cut(s) | 869, 921 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1966 |
| BsiSI | CCGG | 4 cut(s) | 95, 178, 292, 300 |
| BslFI | GGGAC | 4 cut(s) | 239, 480, 1137, 1966 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 879, 1427, 1631, 1931, 2085 |
| BsmAI | GTCTC | 1 cut(s) | 599 |
| BsmFI | GGGAC | 4 cut(s) | 239, 480, 1137, 1966 |
| BsmI | GAATGC | 2 cut(s) | 301, 2161 |
| BsnI | GGCC | 6 cut(s) | 176, 1109, 1712, 1875, 1936, 2089 |
| Bsp119I | TTCGAA | 1 cut(s) | 1941 |
| Bsp1286I | GDGCHC | 2 cut(s) | 568, 1966 |
| Bsp13I | TCCGGA | 1 cut(s) | 94 |
| Bsp143I | GATC | 3 cut(s) | 535, 1801, 1903 |
| Bsp19I | CCATGG | 1 cut(s) | 940 |
| BspACI | CCGC | 1 cut(s) | 2098 |
| BspANI | GGCC | 6 cut(s) | 176, 1109, 1712, 1875, 1936, 2089 |
| BspCNI | CTCAG | 6 cut(s) | 205, 982, 1643, 1661, 1891, 2097 |
| BspEI | TCCGGA | 1 cut(s) | 94 |
| BspHI | TCATGA | 1 cut(s) | 1671 |
| BspLI | GGNNCC | 3 cut(s) | 871, 923, 1768 |
| BspMI | ACCTGC | 1 cut(s) | 688 |
| BspPI | GGATC | 2 cut(s) | 1796, 1911 |
| BspQI | GCTCTTC | 1 cut(s) | 929 |
| BspT104I | TTCGAA | 1 cut(s) | 1941 |
| BspT107I | GGYRCC | 2 cut(s) | 869, 921 |
| BsrDI | GCAATG | 3 cut(s) | 39, 630, 2127 |
| BsrFI | RCCGGY | 1 cut(s) | 299 |
| BsrI | ACTGG | 7 cut(s) | 5, 257, 871, 1007, 1110, 1533, 1737 |
| BssAI | RCCGGY | 1 cut(s) | 299 |
| BssECI | CCNNGG | 4 cut(s) | 793, 940, 1249, 1949 |
| BssMI | GATC | 3 cut(s) | 535, 1801, 1903 |
| BssNI | GRCGYC | 1 cut(s) | 922 |
| BssT1I | CCWWGG | 2 cut(s) | 940, 1249 |
| Bst2UI | CCWGG | 6 cut(s) | 794, 874, 963, 1719, 1950, 2080 |
| Bst4CI | ACNGT | 4 cut(s) | 129, 694, 808, 1753 |
| Bst6I | CTCTTC | 3 cut(s) | 929, 1375, 1777 |
| BstACI | GRCGYC | 1 cut(s) | 922 |
| BstBAI | YACGTR | 2 cut(s) | 266, 1217 |
| BstBI | TTCGAA | 1 cut(s) | 1941 |
| BstC8I | GCNNGC | 3 cut(s) | 628, 651, 1092 |
| BstDEI | CTNAG | 8 cut(s) | 213, 584, 969, 1157, 1630, 1648, 1878, 2084 |
| BstDSI | CCRYGG | 1 cut(s) | 940 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2083 |
| BstF5I | GGATG | 3 cut(s) | 1060, 1280, 1364 |
| BstH2I | RGCGCY | 1 cut(s) | 925 |
| BstHHI | GCGC | 2 cut(s) | 924, 1414 |
| BstKTI | GATC | 3 cut(s) | 538, 1804, 1906 |
| BstMAI | GTCTC | 1 cut(s) | 599 |
| BstMBI | GATC | 3 cut(s) | 535, 1801, 1903 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 202, 563, 632, 659, 1106, 1519, 2095 |
| BstNI | CCWGG | 6 cut(s) | 794, 874, 963, 1719, 1950, 2080 |
| BstNSI | RCATGY | 3 cut(s) | 461, 1094, 1835 |
| BstSCI | CCNGG | 7 cut(s) | 176, 792, 872, 961, 1717, 1948, 2078 |
| BstSFI | CTRYAG | 1 cut(s) | 842 |
| BstSLI | GKGCMC | 1 cut(s) | 1966 |
| BstV1I | GCAGC | 4 cut(s) | 398, 1156, 1195, 1848 |
| BstV2I | GAAGAC | 5 cut(s) | 959, 986, 1031, 1539, 1698 |
| BstX2I | RGATCY | 1 cut(s) | 1801 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 947 |
| BstYI | RGATCY | 1 cut(s) | 1801 |
| Bsu36I | CCTNAGG | 3 cut(s) | 969, 1157, 1630 |
| BsuRI | GGCC | 6 cut(s) | 176, 1109, 1712, 1875, 1936, 2089 |
| BtgI | CCRYGG | 1 cut(s) | 940 |
| BtsCI | GGATG | 3 cut(s) | 1060, 1280, 1364 |
| BtsI | GCAGTG | 1 cut(s) | 493 |
| BtsIMutI | CAGTG | 7 cut(s) | 12, 493, 804, 1000, 1117, 1758, 2013 |
| BveI | ACCTGC | 1 cut(s) | 688 |
| Cac8I | GCNNGC | 3 cut(s) | 628, 651, 1092 |
| CciI | TCATGA | 1 cut(s) | 1671 |
| CfoI | GCGC | 2 cut(s) | 924, 1414 |
| Cfr10I | RCCGGY | 1 cut(s) | 299 |
| Cfr13I | GGNCC | 5 cut(s) | 175, 247, 965, 1874, 1934 |
| CsiI | ACCWGGT | 1 cut(s) | 872 |
| Csp6I | GTAC | 2 cut(s) | 125, 870 |
| CviQI | GTAC | 2 cut(s) | 125, 870 |
| DdeI | CTNAG | 8 cut(s) | 213, 584, 969, 1157, 1630, 1648, 1878, 2084 |
| DinI | GGCGCC | 1 cut(s) | 923 |
| DpnI | GATC | 3 cut(s) | 537, 1803, 1905 |
| DpnII | GATC | 3 cut(s) | 535, 1801, 1903 |
| DraI | TTTAAA | 1 cut(s) | 1578 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2033 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2033 |
| EaeI | YGGCCR | 1 cut(s) | 1710 |
| Eam1104I | CTCTTC | 3 cut(s) | 929, 1375, 1777 |
| EarI | CTCTTC | 3 cut(s) | 929, 1375, 1777 |
| Eco130I | CCWWGG | 2 cut(s) | 940, 1249 |
| Eco147I | AGGCCT | 1 cut(s) | 2089 |
| Eco24I | GRGCYC | 1 cut(s) | 568 |
| Eco47I | GGWCC | 2 cut(s) | 247, 965 |
| Eco57I | CTGAAG | 3 cut(s) | 426, 1410, 1866 |
| Eco72I | CACGTG | 1 cut(s) | 266 |
| Eco81I | CCTNAGG | 3 cut(s) | 969, 1157, 1630 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2083 |
| EcoO109I | RGGNCCY | 2 cut(s) | 965, 1934 |
| EcoRI | GAATTC | 1 cut(s) | 1598 |
| EcoRII | CCWGG | 6 cut(s) | 792, 872, 961, 1717, 1948, 2078 |
| EcoT14I | CCWWGG | 2 cut(s) | 940, 1249 |
| EcoT22I | ATGCAT | 1 cut(s) | 2161 |
| EcoT38I | GRGCYC | 1 cut(s) | 568 |
| EgeI | GGCGCC | 1 cut(s) | 923 |
| EheI | GGCGCC | 1 cut(s) | 923 |
| ErhI | CCWWGG | 2 cut(s) | 940, 1249 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 354, 386, 1176, 1208 |
| FaqI | GGGAC | 4 cut(s) | 239, 480, 1137, 1966 |
| FblI | GTMKAC | 2 cut(s) | 51, 1729 |
| Fnu4HI | GCNGC | 5 cut(s) | 387, 1170, 1209, 1862, 2099 |
| FokI | GGATG | 3 cut(s) | 1067, 1267, 1351 |
| FriOI | GRGCYC | 1 cut(s) | 568 |
| Fsp4HI | GCNGC | 5 cut(s) | 387, 1170, 1209, 1862, 2099 |
| FspBI | CTAG | 9 cut(s) | 593, 725, 1082, 1515, 1826, 1884, 1959, 1968, 2124 |
| GlaI | GCGC | 2 cut(s) | 923, 1413 |
| GluI | GCNGC | 5 cut(s) | 387, 1170, 1209, 1862, 2099 |
| GsaI | CCCAGC | 1 cut(s) | 773 |
| GsuI | CTGGAG | 2 cut(s) | 399, 1754 |
| HaeII | RGCGCY | 1 cut(s) | 925 |
| HaeIII | GGCC | 6 cut(s) | 176, 1109, 1712, 1875, 1936, 2089 |
| HapII | CCGG | 4 cut(s) | 95, 178, 292, 300 |
| HhaI | GCGC | 2 cut(s) | 924, 1414 |
| Hin1I | GRCGYC | 1 cut(s) | 922 |
| Hin6I | GCGC | 2 cut(s) | 922, 1412 |
| HinP1I | GCGC | 2 cut(s) | 922, 1412 |
| HincII | GTYRAC | 1 cut(s) | 802 |
| HindII | GTYRAC | 1 cut(s) | 802 |
| HindIII | AAGCTT | 1 cut(s) | 421 |
| HpaI | GTTAAC | 1 cut(s) | 802 |
| HpaII | CCGG | 4 cut(s) | 95, 178, 292, 300 |
| HphI | GGTGA | 1 cut(s) | 1700 |
| Hpy166II | GTNNAC | 7 cut(s) | 52, 802, 1034, 1616, 1640, 1730, 1964 |
| Hpy188I | TCNGA | 7 cut(s) | 28, 307, 812, 832, 933, 1120, 1918 |
| Hpy188III | TCNNGA | 9 cut(s) | 33, 95, 371, 416, 542, 1323, 1650, 1672, 1884 |
| Hpy8I | GTNNAC | 7 cut(s) | 52, 802, 1034, 1616, 1640, 1730, 1964 |
| Hpy99I | CGWCG | 1 cut(s) | 543 |
| HpyAV | CCTTC | 8 cut(s) | 325, 476, 595, 935, 1149, 1434, 1707, 1986 |
| HpyCH4III | ACNGT | 4 cut(s) | 129, 694, 808, 1753 |
| HpyCH4IV | ACGT | 5 cut(s) | 69, 265, 1036, 1066, 1216 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 202, 563, 632, 659, 1106, 1519, 2095 |
| HpyF3I | CTNAG | 8 cut(s) | 213, 584, 969, 1157, 1630, 1648, 1878, 2084 |
| HpySE526I | ACGT | 5 cut(s) | 69, 265, 1036, 1066, 1216 |
| Hsp92I | GRCGYC | 1 cut(s) | 922 |
| HspAI | GCGC | 2 cut(s) | 922, 1412 |
| KasI | GGCGCC | 1 cut(s) | 921 |
| Kpn2I | TCCGGA | 1 cut(s) | 94 |
| KpnI | GGTACC | 1 cut(s) | 873 |
| KspAI | GTTAAC | 1 cut(s) | 802 |
| Kzo9I | GATC | 3 cut(s) | 535, 1801, 1903 |
| LguI | GCTCTTC | 1 cut(s) | 929 |
| LmnI | GCTCC | 3 cut(s) | 415, 1447, 1735 |
| Lsp1109I | GCAGC | 4 cut(s) | 398, 1156, 1195, 1848 |
| LweI | GCATC | 5 cut(s) | 373, 636, 1177, 1531, 1840 |
| MabI | ACCWGGT | 1 cut(s) | 872 |
| MaeI | CTAG | 9 cut(s) | 593, 725, 1082, 1515, 1826, 1884, 1959, 1968, 2124 |
| MaeII | ACGT | 5 cut(s) | 69, 265, 1036, 1066, 1216 |
| MaeIII | GTNAC | 2 cut(s) | 453, 2006 |
| MalI | GATC | 3 cut(s) | 537, 1803, 1905 |
| MboI | GATC | 3 cut(s) | 535, 1801, 1903 |
| MfeI | CAATTG | 3 cut(s) | 354, 432, 1043 |
| MflI | RGATCY | 1 cut(s) | 1801 |
| MhlI | GDGCHC | 2 cut(s) | 568, 1966 |
| MlsI | TGGCCA | 1 cut(s) | 1712 |
| MluNI | TGGCCA | 1 cut(s) | 1712 |
| Mly113I | GGCGCC | 1 cut(s) | 922 |
| MlyI | GAGTC | 4 cut(s) | 45, 224, 462, 737 |
| MmeI | TCCRAC | 1 cut(s) | 790 |
| Mox20I | TGGCCA | 1 cut(s) | 1712 |
| Mph1103I | ATGCAT | 1 cut(s) | 2161 |
| MroI | TCCGGA | 1 cut(s) | 94 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1038, 1133, 1330, 1771 |
| MscI | TGGCCA | 1 cut(s) | 1712 |
| MseI | TTAA | 8 cut(s) | 101, 741, 801, 1008, 1194, 1577, 1704, 1791 |
| Msp20I | TGGCCA | 1 cut(s) | 1712 |
| MspA1I | CMGCKG | 2 cut(s) | 244, 626 |
| MspI | CCGG | 4 cut(s) | 95, 178, 292, 300 |
| MspR9I | CCNGG | 7 cut(s) | 178, 794, 874, 963, 1719, 1950, 2080 |
| MunI | CAATTG | 3 cut(s) | 354, 432, 1043 |
| Mva1269I | GAATGC | 2 cut(s) | 301, 2161 |
| MvaI | CCWGG | 6 cut(s) | 794, 874, 963, 1719, 1950, 2080 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 202, 563, 632, 659, 1106, 1519, 2095 |
| NarI | GGCGCC | 1 cut(s) | 922 |
| NciI | CCSGG | 1 cut(s) | 178 |
| NcoI | CCATGG | 1 cut(s) | 940 |
| NdeII | GATC | 3 cut(s) | 535, 1801, 1903 |
| NlaIV | GGNNCC | 3 cut(s) | 871, 923, 1768 |
| NmuCI | GTSAC | 1 cut(s) | 453 |
| NsiI | ATGCAT | 1 cut(s) | 2161 |
| NspI | RCATGY | 3 cut(s) | 461, 1094, 1835 |
| NspV | TTCGAA | 1 cut(s) | 1941 |
| PaeI | GCATGC | 1 cut(s) | 1094 |
| PagI | TCATGA | 1 cut(s) | 1671 |
| PceI | AGGCCT | 1 cut(s) | 2089 |
| PciI | ACATGT | 2 cut(s) | 457, 1831 |
| PciSI | GCTCTTC | 1 cut(s) | 929 |
| PctI | GAATGC | 2 cut(s) | 301, 2161 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1038, 1133, 1330, 1771 |
| PfeI | GAWTC | 7 cut(s) | 29, 858, 1115, 1121, 1406, 1561, 1657 |
| PfoI | TCCNGGA | 1 cut(s) | 961 |
| PkrI | GCNGC | 5 cut(s) | 388, 1171, 1210, 1863, 2100 |
| PleI | GAGTC | 4 cut(s) | 44, 223, 462, 736 |
| PluTI | GGCGCC | 1 cut(s) | 925 |
| PmaCI | CACGTG | 1 cut(s) | 266 |
| PmlI | CACGTG | 1 cut(s) | 266 |
| PpsI | GAGTC | 4 cut(s) | 44, 223, 462, 736 |
| Ppu21I | YACGTR | 2 cut(s) | 266, 1217 |
| PpuMI | RGGWCCY | 1 cut(s) | 965 |
| PscI | ACATGT | 2 cut(s) | 457, 1831 |
| Psp5II | RGGWCCY | 1 cut(s) | 965 |
| Psp6I | CCWGG | 6 cut(s) | 792, 872, 961, 1717, 1948, 2078 |
| PspCI | CACGTG | 1 cut(s) | 266 |
| PspFI | CCCAGC | 1 cut(s) | 769 |
| PspGI | CCWGG | 6 cut(s) | 792, 872, 961, 1717, 1948, 2078 |
| PspN4I | GGNNCC | 3 cut(s) | 871, 923, 1768 |
| PspPI | GGNCC | 5 cut(s) | 175, 247, 965, 1874, 1934 |
| PspPPI | RGGWCCY | 1 cut(s) | 965 |
| PsuI | RGATCY | 1 cut(s) | 1801 |
| PvuII | CAGCTG | 2 cut(s) | 244, 626 |
| RsaI | GTAC | 2 cut(s) | 126, 871 |
| RsaNI | GTAC | 2 cut(s) | 125, 870 |
| SapI | GCTCTTC | 1 cut(s) | 929 |
| SaqAI | TTAA | 8 cut(s) | 101, 741, 801, 1008, 1194, 1577, 1704, 1791 |
| SatI | GCNGC | 5 cut(s) | 387, 1170, 1209, 1862, 2099 |
| Sau3AI | GATC | 3 cut(s) | 535, 1801, 1903 |
| Sau96I | GGNCC | 5 cut(s) | 175, 247, 965, 1874, 1934 |
| SchI | GAGTC | 4 cut(s) | 45, 224, 462, 737 |
| ScrFI | CCNGG | 7 cut(s) | 178, 794, 874, 963, 1719, 1950, 2080 |
| SduI | GDGCHC | 2 cut(s) | 568, 1966 |
| SexAI | ACCWGGT | 1 cut(s) | 872 |
| SfaNI | GCATC | 5 cut(s) | 373, 636, 1177, 1531, 1840 |
| SfcI | CTRYAG | 1 cut(s) | 842 |
| SfoI | GGCGCC | 1 cut(s) | 923 |
| SfuI | TTCGAA | 1 cut(s) | 1941 |
| SinI | GGWCC | 2 cut(s) | 247, 965 |
| SmlI | CTYRAG | 1 cut(s) | 449 |
| SmoI | CTYRAG | 1 cut(s) | 449 |
| SpeI | ACTAGT | 1 cut(s) | 1081 |
| SphI | GCATGC | 1 cut(s) | 1094 |
| SseBI | AGGCCT | 1 cut(s) | 2089 |
| SsiI | CCGC | 1 cut(s) | 2098 |
| SspDI | GGCGCC | 1 cut(s) | 921 |
| SspI | AATATT | 2 cut(s) | 886, 1779 |
| SspMI | CTAG | 9 cut(s) | 593, 725, 1082, 1515, 1826, 1884, 1959, 1968, 2124 |
| StuI | AGGCCT | 1 cut(s) | 2089 |
| StyD4I | CCNGG | 7 cut(s) | 176, 792, 872, 961, 1717, 1948, 2078 |
| StyI | CCWWGG | 2 cut(s) | 940, 1249 |
| TaaI | ACNGT | 4 cut(s) | 129, 694, 808, 1753 |
| TaiI | ACGT | 5 cut(s) | 72, 268, 1039, 1069, 1219 |
| TaqI | TCGA | 5 cut(s) | 32, 337, 471, 1373, 1941 |
| TauI | GCSGC | 1 cut(s) | 2101 |
| TfiI | GAWTC | 7 cut(s) | 29, 858, 1115, 1121, 1406, 1561, 1657 |
| Tru1I | TTAA | 8 cut(s) | 101, 741, 801, 1008, 1194, 1577, 1704, 1791 |
| Tru9I | TTAA | 8 cut(s) | 101, 741, 801, 1008, 1194, 1577, 1704, 1791 |
| TscAI | CASTG | 7 cut(s) | 12, 493, 811, 1007, 1117, 1758, 2020 |
| TseFI | GTSAC | 1 cut(s) | 453 |
| TseI | GCWGC | 4 cut(s) | 386, 1169, 1208, 1861 |
| Tsp45I | GTSAC | 1 cut(s) | 453 |
| TspGWI | ACGGA | 3 cut(s) | 870, 1554, 2023 |
| TspRI | CASTG | 7 cut(s) | 12, 493, 811, 1007, 1117, 1758, 2020 |
| VneI | GTGCAC | 1 cut(s) | 1962 |
| VpaK11BI | GGWCC | 2 cut(s) | 247, 965 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2083 |
| XapI | RAATTY | 5 cut(s) | 237, 611, 1598, 1678, 2058 |
| XbaI | TCTAGA | 1 cut(s) | 1883 |
| XceI | RCATGY | 3 cut(s) | 461, 1094, 1835 |
| XmiI | GTMKAC | 2 cut(s) | 51, 1729 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1038, 1133, 1330, 1771 |
| XspI | CTAG | 9 cut(s) | 593, 725, 1082, 1515, 1826, 1884, 1959, 1968, 2124 |
| Zsp2I | ATGCAT | 1 cut(s) | 2161 |