ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 99 |
| AccI | GTMKAC | 1 cut(s) | 68 |
| AciI | CCGC | 1 cut(s) | 97 |
| AcoI | YGGCCR | 1 cut(s) | 111 |
| AcsI | RAATTY | 2 cut(s) | 79, 140 |
| AfaI | GTAC | 1 cut(s) | 227 |
| AgeI | ACCGGT | 1 cut(s) | 132 |
| AgsI | TTSAA | 2 cut(s) | 139, 161 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 216 |
| AluBI | AGCT | 3 cut(s) | 20, 149, 286 |
| AluI | AGCT | 3 cut(s) | 20, 149, 286 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| Alw44I | GTGCAC | 1 cut(s) | 128 |
| AoxI | GGCC | 1 cut(s) | 111 |
| ApaLI | GTGCAC | 1 cut(s) | 128 |
| ApeKI | GCWGC | 1 cut(s) | 233 |
| ApoI | RAATTY | 2 cut(s) | 79, 140 |
| AsiGI | ACCGGT | 1 cut(s) | 132 |
| AsuHPI | GGTGA | 1 cut(s) | 44 |
| AsuII | TTCGAA | 1 cut(s) | 144 |
| BaeGI | GKGCMC | 1 cut(s) | 132 |
| BalI | TGGCCA | 1 cut(s) | 113 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BbvI | GCAGC | 1 cut(s) | 245 |
| BccI | CCATC | 2 cut(s) | 45, 266 |
| BciVI | GTATCC | 1 cut(s) | 252 |
| BfaI | CTAG | 2 cut(s) | 213, 296 |
| BfuI | GTATCC | 1 cut(s) | 252 |
| BisI | GCNGC | 1 cut(s) | 234 |
| BlsI | GCNGC | 1 cut(s) | 235 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 216 |
| Bpu14I | TTCGAA | 1 cut(s) | 144 |
| BsaWI | WCCGGW | 1 cut(s) | 132 |
| Bse118I | RCCGGY | 1 cut(s) | 132 |
| Bse1I | ACTGG | 1 cut(s) | 158 |
| BseNI | ACTGG | 1 cut(s) | 158 |
| BseSI | GKGCMC | 1 cut(s) | 132 |
| BseXI | GCAGC | 1 cut(s) | 245 |
| BsgI | GTGCAG | 1 cut(s) | 252 |
| BshFI | GGCC | 1 cut(s) | 113 |
| BshTI | ACCGGT | 1 cut(s) | 132 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BsiSI | CCGG | 1 cut(s) | 133 |
| BsnI | GGCC | 1 cut(s) | 113 |
| Bsp119I | TTCGAA | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 132 |
| BspACI | CCGC | 1 cut(s) | 97 |
| BspANI | GGCC | 1 cut(s) | 113 |
| BspT104I | TTCGAA | 1 cut(s) | 144 |
| BsrBI | CCGCTC | 1 cut(s) | 99 |
| BsrFI | RCCGGY | 1 cut(s) | 132 |
| BsrI | ACTGG | 1 cut(s) | 158 |
| BssAI | RCCGGY | 1 cut(s) | 132 |
| Bst4CI | ACNGT | 2 cut(s) | 205, 230 |
| BstBI | TTCGAA | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 2 cut(s) | 192, 284 |
| BstEII | GGTNACC | 1 cut(s) | 32 |
| BstPI | GGTNACC | 1 cut(s) | 32 |
| BstSLI | GKGCMC | 1 cut(s) | 132 |
| BstV1I | GCAGC | 1 cut(s) | 245 |
| BsuI | GTATCC | 1 cut(s) | 252 |
| BsuRI | GGCC | 1 cut(s) | 113 |
| Cac8I | GCNNGC | 2 cut(s) | 192, 284 |
| Cfr10I | RCCGGY | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 226 |
| CspAI | ACCGGT | 1 cut(s) | 132 |
| CviAII | CATG | 2 cut(s) | 72, 195 |
| CviJI | RGCY | 6 cut(s) | 20, 113, 149, 157, 236, 286 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 113, 149, 157, 236, 286 |
| CviQI | GTAC | 1 cut(s) | 226 |
| DriI | GACNNNNNGTC | 1 cut(s) | 216 |
| EaeI | YGGCCR | 1 cut(s) | 111 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 216 |
| Eco91I | GGTNACC | 1 cut(s) | 32 |
| EcoO65I | GGTNACC | 1 cut(s) | 32 |
| EcoRI | GAATTC | 1 cut(s) | 79 |
| FaeI | CATG | 2 cut(s) | 75, 198 |
| FaiI | YATR | 8 cut(s) | 30, 65, 73, 165, 196, 224, 308, 310 |
| FatI | CATG | 2 cut(s) | 71, 194 |
| FauNDI | CATATG | 1 cut(s) | 308 |
| FblI | GTMKAC | 1 cut(s) | 68 |
| Fnu4HI | GCNGC | 1 cut(s) | 234 |
| Fsp4HI | GCNGC | 1 cut(s) | 234 |
| FspBI | CTAG | 2 cut(s) | 213, 296 |
| GluI | GCNGC | 1 cut(s) | 234 |
| HaeIII | GGCC | 1 cut(s) | 113 |
| HapII | CCGG | 1 cut(s) | 133 |
| Hin1II | CATG | 2 cut(s) | 75, 198 |
| HindIII | AAGCTT | 1 cut(s) | 147 |
| HpaII | CCGG | 1 cut(s) | 133 |
| HphI | GGTGA | 1 cut(s) | 44 |
| Hpy166II | GTNNAC | 3 cut(s) | 69, 130, 252 |
| Hpy188I | TCNGA | 1 cut(s) | 85 |
| Hpy188III | TCNNGA | 4 cut(s) | 14, 41, 208, 291 |
| Hpy8I | GTNNAC | 3 cut(s) | 69, 130, 252 |
| HpyCH4III | ACNGT | 2 cut(s) | 205, 230 |
| HpyCH4V | TGCA | 2 cut(s) | 130, 233 |
| Hsp92II | CATG | 2 cut(s) | 75, 198 |
| LpnPI | CCDG | 4 cut(s) | 41, 139, 146, 276 |
| Lsp1109I | GCAGC | 1 cut(s) | 245 |
| MaeI | CTAG | 2 cut(s) | 213, 296 |
| MaeIII | GTNAC | 2 cut(s) | 32, 208 |
| MbiI | CCGCTC | 1 cut(s) | 99 |
| MboII | GAAGA | 1 cut(s) | 253 |
| MhlI | GDGCHC | 1 cut(s) | 132 |
| MlsI | TGGCCA | 1 cut(s) | 113 |
| MluCI | AATT | 2 cut(s) | 79, 140 |
| MluNI | TGGCCA | 1 cut(s) | 113 |
| Mox20I | TGGCCA | 1 cut(s) | 113 |
| MscI | TGGCCA | 1 cut(s) | 113 |
| Msp20I | TGGCCA | 1 cut(s) | 113 |
| MspI | CCGG | 1 cut(s) | 133 |
| NdeI | CATATG | 1 cut(s) | 308 |
| NlaIII | CATG | 2 cut(s) | 75, 198 |
| NmuCI | GTSAC | 2 cut(s) | 32, 208 |
| NspV | TTCGAA | 1 cut(s) | 144 |
| PinAI | ACCGGT | 1 cut(s) | 132 |
| PkrI | GCNGC | 1 cut(s) | 235 |
| PspEI | GGTNACC | 1 cut(s) | 32 |
| RsaI | GTAC | 1 cut(s) | 227 |
| RsaNI | GTAC | 1 cut(s) | 226 |
| SatI | GCNGC | 1 cut(s) | 234 |
| SduI | GDGCHC | 1 cut(s) | 132 |
| SetI | ASST | 5 cut(s) | 22, 151, 183, 288, 301 |
| SfuI | TTCGAA | 1 cut(s) | 144 |
| Sse9I | AATT | 2 cut(s) | 79, 140 |
| SsiI | CCGC | 1 cut(s) | 97 |
| SspMI | CTAG | 2 cut(s) | 213, 296 |
| TaaI | ACNGT | 2 cut(s) | 205, 230 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TasI | AATT | 2 cut(s) | 79, 140 |
| TatI | WGTACW | 1 cut(s) | 225 |
| TseFI | GTSAC | 2 cut(s) | 32, 208 |
| TseI | GCWGC | 1 cut(s) | 233 |
| Tsp45I | GTSAC | 2 cut(s) | 32, 208 |
| VneI | GTGCAC | 1 cut(s) | 128 |
| XapI | RAATTY | 2 cut(s) | 79, 140 |
| XmiI | GTMKAC | 1 cut(s) | 68 |
| XspI | CTAG | 2 cut(s) | 213, 296 |