ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 47 |
| AclWI | GGATC | 1 cut(s) | 325 |
| AcsI | RAATTY | 3 cut(s) | 16, 173, 188 |
| AfaI | GTAC | 4 cut(s) | 126, 148, 207, 265 |
| AgsI | TTSAA | 2 cut(s) | 187, 194 |
| AjnI | CCWGG | 2 cut(s) | 8, 333 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| AlwI | GGATC | 1 cut(s) | 325 |
| AoxI | GGCC | 2 cut(s) | 167, 337 |
| ApoI | RAATTY | 3 cut(s) | 16, 173, 188 |
| AspS9I | GGNCC | 1 cut(s) | 337 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| AsuII | TTCGAA | 1 cut(s) | 21 |
| BaeGI | GKGCMC | 1 cut(s) | 84 |
| BccI | CCATC | 1 cut(s) | 341 |
| BceAI | ACGGC | 2 cut(s) | 43, 50 |
| BciT130I | CCWGG | 2 cut(s) | 10, 335 |
| BclI | TGATCA | 2 cut(s) | 118, 385 |
| BfaI | CTAG | 3 cut(s) | 38, 144, 165 |
| Bme1390I | CCNGG | 2 cut(s) | 10, 335 |
| BmgT120I | GGNCC | 1 cut(s) | 337 |
| BmrFI | CCNGG | 2 cut(s) | 10, 335 |
| BmsI | GCATC | 2 cut(s) | 364, 437 |
| BpmI | CTGGAG | 1 cut(s) | 158 |
| Bpu14I | TTCGAA | 1 cut(s) | 21 |
| BsaBI | GATNNNNATC | 2 cut(s) | 117, 155 |
| BsaJI | CCNNGG | 1 cut(s) | 334 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 344, 374 |
| Bse8I | GATNNNNATC | 2 cut(s) | 117, 155 |
| BseBI | CCWGG | 2 cut(s) | 10, 335 |
| BseDI | CCNNGG | 1 cut(s) | 334 |
| BseGI | GGATG | 2 cut(s) | 376, 401 |
| BseJI | GATNNNNATC | 2 cut(s) | 117, 155 |
| BseMII | CTCAG | 1 cut(s) | 207 |
| BseRI | GAGGAG | 1 cut(s) | 294 |
| BseSI | GKGCMC | 1 cut(s) | 84 |
| BseYI | CCCAGC | 1 cut(s) | 224 |
| BshFI | GGCC | 2 cut(s) | 169, 339 |
| BsnI | GGCC | 2 cut(s) | 169, 339 |
| Bsp119I | TTCGAA | 1 cut(s) | 21 |
| Bsp1286I | GDGCHC | 1 cut(s) | 84 |
| Bsp143I | GATC | 4 cut(s) | 70, 118, 330, 385 |
| BspACI | CCGC | 1 cut(s) | 47 |
| BspANI | GGCC | 2 cut(s) | 169, 339 |
| BspCNI | CTCAG | 1 cut(s) | 208 |
| BspPI | GGATC | 1 cut(s) | 325 |
| BspT104I | TTCGAA | 1 cut(s) | 21 |
| BssECI | CCNNGG | 1 cut(s) | 334 |
| BssMI | GATC | 4 cut(s) | 70, 118, 330, 385 |
| Bst2UI | CCWGG | 2 cut(s) | 10, 335 |
| BstBI | TTCGAA | 1 cut(s) | 21 |
| BstC8I | GCNNGC | 1 cut(s) | 56 |
| BstDEI | CTNAG | 1 cut(s) | 216 |
| BstF5I | GGATG | 2 cut(s) | 376, 401 |
| BstKTI | GATC | 4 cut(s) | 73, 121, 333, 388 |
| BstMBI | GATC | 4 cut(s) | 70, 118, 330, 385 |
| BstNI | CCWGG | 2 cut(s) | 10, 335 |
| BstSCI | CCNGG | 2 cut(s) | 8, 333 |
| BstSLI | GKGCMC | 1 cut(s) | 84 |
| BsuRI | GGCC | 2 cut(s) | 169, 339 |
| BtsCI | GGATG | 2 cut(s) | 376, 401 |
| BtsI | GCAGTG | 1 cut(s) | 365 |
| BtsIMutI | CAGTG | 1 cut(s) | 365 |
| Cac8I | GCNNGC | 1 cut(s) | 56 |
| Cfr13I | GGNCC | 1 cut(s) | 337 |
| CsiI | ACCWGGT | 1 cut(s) | 8 |
| Csp6I | GTAC | 4 cut(s) | 125, 147, 206, 264 |
| CviAII | CATG | 2 cut(s) | 122, 243 |
| CviJI | RGCY | 7 cut(s) | 5, 31, 37, 143, 169, 339, 449 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 31, 37, 143, 169, 339, 449 |
| CviQI | GTAC | 4 cut(s) | 125, 147, 206, 264 |
| DdeI | CTNAG | 1 cut(s) | 216 |
| DpnI | GATC | 4 cut(s) | 72, 120, 332, 387 |
| DpnII | GATC | 4 cut(s) | 70, 118, 330, 385 |
| EcoO109I | RGGNCCY | 1 cut(s) | 337 |
| EcoRII | CCWGG | 2 cut(s) | 8, 333 |
| FaeI | CATG | 2 cut(s) | 125, 246 |
| FaiI | YATR | 8 cut(s) | 52, 123, 244, 272, 300, 329, 345, 456 |
| FatI | CATG | 2 cut(s) | 121, 242 |
| FbaI | TGATCA | 2 cut(s) | 118, 385 |
| FokI | GGATG | 2 cut(s) | 383, 388 |
| FspBI | CTAG | 3 cut(s) | 38, 144, 165 |
| GsaI | CCCAGC | 1 cut(s) | 228 |
| GsuI | CTGGAG | 1 cut(s) | 158 |
| HaeIII | GGCC | 2 cut(s) | 169, 339 |
| Hin1II | CATG | 2 cut(s) | 125, 246 |
| HinfI | GANTC | 1 cut(s) | 113 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 4 cut(s) | 112, 118, 217, 433 |
| Hpy188III | TCNNGA | 1 cut(s) | 389 |
| HpyAV | CCTTC | 1 cut(s) | 117 |
| HpyCH4IV | ACGT | 1 cut(s) | 461 |
| HpyCH4V | TGCA | 1 cut(s) | 54 |
| HpyF3I | CTNAG | 1 cut(s) | 216 |
| HpySE526I | ACGT | 1 cut(s) | 461 |
| Hsp92II | CATG | 2 cut(s) | 125, 246 |
| Ksp22I | TGATCA | 2 cut(s) | 118, 385 |
| Kzo9I | GATC | 4 cut(s) | 70, 118, 330, 385 |
| LpnPI | CCDG | 9 cut(s) | 22, 122, 166, 210, 320, 347, 363, 374, 410 |
| LweI | GCATC | 2 cut(s) | 364, 437 |
| MabI | ACCWGGT | 1 cut(s) | 8 |
| MaeI | CTAG | 3 cut(s) | 38, 144, 165 |
| MaeII | ACGT | 1 cut(s) | 461 |
| MalI | GATC | 4 cut(s) | 72, 120, 332, 387 |
| MboI | GATC | 4 cut(s) | 70, 118, 330, 385 |
| MhlI | GDGCHC | 1 cut(s) | 84 |
| MluCI | AATT | 4 cut(s) | 16, 173, 188, 291 |
| MmeI | TCCRAC | 1 cut(s) | 444 |
| MnlI | CCTC | 7 cut(s) | 133, 240, 315, 346, 361, 427, 439 |
| MspR9I | CCNGG | 2 cut(s) | 10, 335 |
| MvaI | CCWGG | 2 cut(s) | 10, 335 |
| NdeII | GATC | 4 cut(s) | 70, 118, 330, 385 |
| NlaIII | CATG | 2 cut(s) | 125, 246 |
| NspV | TTCGAA | 1 cut(s) | 21 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| Psp6I | CCWGG | 2 cut(s) | 8, 333 |
| PspFI | CCCAGC | 1 cut(s) | 224 |
| PspGI | CCWGG | 2 cut(s) | 8, 333 |
| PspPI | GGNCC | 1 cut(s) | 337 |
| RsaI | GTAC | 4 cut(s) | 126, 148, 207, 265 |
| RsaNI | GTAC | 4 cut(s) | 125, 147, 206, 264 |
| Sau3AI | GATC | 4 cut(s) | 70, 118, 330, 385 |
| Sau96I | GGNCC | 1 cut(s) | 337 |
| ScrFI | CCNGG | 2 cut(s) | 10, 335 |
| SduI | GDGCHC | 1 cut(s) | 84 |
| SetI | ASST | 8 cut(s) | 11, 33, 102, 130, 157, 185, 438, 464 |
| SexAI | ACCWGGT | 1 cut(s) | 8 |
| SfaNI | GCATC | 2 cut(s) | 364, 437 |
| SfuI | TTCGAA | 1 cut(s) | 21 |
| Sse9I | AATT | 4 cut(s) | 16, 173, 188, 291 |
| SsiI | CCGC | 1 cut(s) | 47 |
| SspMI | CTAG | 3 cut(s) | 38, 144, 165 |
| StyD4I | CCNGG | 2 cut(s) | 8, 333 |
| TaiI | ACGT | 1 cut(s) | 464 |
| TaqI | TCGA | 2 cut(s) | 21, 444 |
| TasI | AATT | 4 cut(s) | 16, 173, 188, 291 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| TscAI | CASTG | 1 cut(s) | 365 |
| TspDTI | ATGAA | 2 cut(s) | 252, 443 |
| TspGWI | ACGGA | 1 cut(s) | 266 |
| TspRI | CASTG | 1 cut(s) | 365 |
| XapI | RAATTY | 3 cut(s) | 16, 173, 188 |
| XspI | CTAG | 3 cut(s) | 38, 144, 165 |