Zinc knuckle
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 344 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 431, 437 |
| AgsI | TTSAA | 1 cut(s) | 143 |
| AjnI | CCWGG | 2 cut(s) | 238, 430 |
| AluBI | AGCT | 5 cut(s) | 22, 44, 258, 338, 459 |
| AluI | AGCT | 5 cut(s) | 22, 44, 258, 338, 459 |
| Alw21I | GWGCWC | 1 cut(s) | 24 |
| Alw26I | GTCTC | 2 cut(s) | 7, 183 |
| AoxI | GGCC | 1 cut(s) | 422 |
| AspLEI | GCGC | 1 cut(s) | 276 |
| AspS9I | GGNCC | 1 cut(s) | 236 |
| AsuHPI | GGTGA | 2 cut(s) | 223, 307 |
| AvaII | GGWCC | 1 cut(s) | 236 |
| BanII | GRGCYC | 1 cut(s) | 24 |
| Bbv12I | GWGCWC | 1 cut(s) | 24 |
| BccI | CCATC | 3 cut(s) | 86, 152, 325 |
| BciT130I | CCWGG | 2 cut(s) | 240, 432 |
| BcoDI | GTCTC | 2 cut(s) | 7, 183 |
| BfaI | CTAG | 2 cut(s) | 66, 460 |
| Bme1390I | CCNGG | 2 cut(s) | 240, 432 |
| Bme18I | GGWCC | 1 cut(s) | 236 |
| BmgT120I | GGNCC | 1 cut(s) | 236 |
| BmrFI | CCNGG | 2 cut(s) | 240, 432 |
| BmsI | GCATC | 3 cut(s) | 133, 350, 442 |
| BpmI | CTGGAG | 2 cut(s) | 38, 453 |
| BsaJI | CCNNGG | 2 cut(s) | 55, 280 |
| BsaWI | WCCGGW | 1 cut(s) | 233 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 431, 437 |
| Bse1I | ACTGG | 2 cut(s) | 21, 221 |
| BseBI | CCWGG | 2 cut(s) | 240, 432 |
| BseDI | CCNNGG | 2 cut(s) | 55, 280 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 431, 437 |
| BseMII | CTCAG | 1 cut(s) | 37 |
| BseNI | ACTGG | 2 cut(s) | 21, 221 |
| BshFI | GGCC | 1 cut(s) | 424 |
| BsiHKAI | GWGCWC | 1 cut(s) | 24 |
| BsiSI | CCGG | 1 cut(s) | 234 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 431, 437 |
| BsmAI | GTCTC | 2 cut(s) | 7, 183 |
| BsnI | GGCC | 1 cut(s) | 424 |
| Bsp1286I | GDGCHC | 1 cut(s) | 24 |
| Bsp143I | GATC | 1 cut(s) | 402 |
| Bsp19I | CCATGG | 1 cut(s) | 280 |
| BspANI | GGCC | 1 cut(s) | 424 |
| BspCNI | CTCAG | 1 cut(s) | 36 |
| BspHI | TCATGA | 1 cut(s) | 348 |
| BsrI | ACTGG | 2 cut(s) | 21, 221 |
| BssECI | CCNNGG | 2 cut(s) | 55, 280 |
| BssMI | GATC | 1 cut(s) | 402 |
| BssT1I | CCWWGG | 1 cut(s) | 280 |
| Bst2UI | CCWGG | 2 cut(s) | 240, 432 |
| Bst4CI | ACNGT | 1 cut(s) | 38 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 452 |
| BstC8I | GCNNGC | 3 cut(s) | 317, 444, 457 |
| BstDEI | CTNAG | 2 cut(s) | 11, 23 |
| BstDSI | CCRYGG | 1 cut(s) | 280 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 435 |
| BstHHI | GCGC | 1 cut(s) | 276 |
| BstKTI | GATC | 1 cut(s) | 405 |
| BstMAI | GTCTC | 2 cut(s) | 7, 183 |
| BstMBI | GATC | 1 cut(s) | 402 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 264, 273, 452 |
| BstNI | CCWGG | 2 cut(s) | 240, 432 |
| BstNSI | RCATGY | 1 cut(s) | 319 |
| BstSCI | CCNGG | 2 cut(s) | 238, 430 |
| BsuRI | GGCC | 1 cut(s) | 424 |
| BtgI | CCRYGG | 1 cut(s) | 280 |
| BtsIMutI | CAGTG | 1 cut(s) | 228 |
| Cac8I | GCNNGC | 3 cut(s) | 317, 444, 457 |
| CciI | TCATGA | 1 cut(s) | 348 |
| CfoI | GCGC | 1 cut(s) | 276 |
| Cfr13I | GGNCC | 1 cut(s) | 236 |
| CseI | GACGC | 2 cut(s) | 217, 252 |
| Csp6I | GTAC | 1 cut(s) | 343 |
| CviAII | CATG | 3 cut(s) | 281, 316, 349 |
| CviQI | GTAC | 1 cut(s) | 343 |
| DdeI | CTNAG | 2 cut(s) | 11, 23 |
| DpnI | GATC | 1 cut(s) | 404 |
| DpnII | GATC | 1 cut(s) | 402 |
| Ecl136II | GAGCTC | 1 cut(s) | 22 |
| Eco130I | CCWWGG | 1 cut(s) | 280 |
| Eco24I | GRGCYC | 1 cut(s) | 24 |
| Eco47I | GGWCC | 1 cut(s) | 236 |
| Eco53kI | GAGCTC | 1 cut(s) | 22 |
| EcoICRI | GAGCTC | 1 cut(s) | 22 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 435 |
| EcoRII | CCWGG | 2 cut(s) | 238, 430 |
| EcoT14I | CCWWGG | 1 cut(s) | 280 |
| EcoT38I | GRGCYC | 1 cut(s) | 24 |
| ErhI | CCWWGG | 1 cut(s) | 280 |
| FaeI | CATG | 3 cut(s) | 284, 319, 352 |
| FaiI | YATR | 4 cut(s) | 206, 282, 317, 350 |
| FatI | CATG | 3 cut(s) | 280, 315, 348 |
| FriOI | GRGCYC | 1 cut(s) | 24 |
| FspBI | CTAG | 2 cut(s) | 66, 460 |
| GlaI | GCGC | 1 cut(s) | 275 |
| GsuI | CTGGAG | 2 cut(s) | 38, 453 |
| HaeIII | GGCC | 1 cut(s) | 424 |
| HapII | CCGG | 1 cut(s) | 234 |
| HgaI | GACGC | 2 cut(s) | 217, 252 |
| HhaI | GCGC | 1 cut(s) | 276 |
| Hin1II | CATG | 3 cut(s) | 284, 319, 352 |
| Hin6I | GCGC | 1 cut(s) | 274 |
| HinP1I | GCGC | 1 cut(s) | 274 |
| HpaII | CCGG | 1 cut(s) | 234 |
| HphI | GGTGA | 2 cut(s) | 223, 307 |
| Hpy166II | GTNNAC | 1 cut(s) | 343 |
| Hpy188I | TCNGA | 1 cut(s) | 12 |
| Hpy188III | TCNNGA | 2 cut(s) | 253, 349 |
| Hpy8I | GTNNAC | 1 cut(s) | 343 |
| HpyAV | CCTTC | 3 cut(s) | 259, 346, 396 |
| HpyCH4III | ACNGT | 1 cut(s) | 38 |
| HpyCH4IV | ACGT | 1 cut(s) | 345 |
| HpyCH4V | TGCA | 3 cut(s) | 267, 315, 363 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 264, 273, 452 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 23 |
| HpySE526I | ACGT | 1 cut(s) | 345 |
| Hsp92II | CATG | 3 cut(s) | 284, 319, 352 |
| HspAI | GCGC | 1 cut(s) | 274 |
| Kzo9I | GATC | 1 cut(s) | 402 |
| LmnI | GCTCC | 3 cut(s) | 19, 251, 335 |
| LweI | GCATC | 3 cut(s) | 133, 350, 442 |
| MaeI | CTAG | 2 cut(s) | 66, 460 |
| MaeII | ACGT | 1 cut(s) | 345 |
| MaeIII | GTNAC | 1 cut(s) | 229 |
| MalI | GATC | 1 cut(s) | 404 |
| MboI | GATC | 1 cut(s) | 402 |
| MhlI | GDGCHC | 1 cut(s) | 24 |
| MnlI | CCTC | 1 cut(s) | 50 |
| MseI | TTAA | 1 cut(s) | 302 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| MspI | CCGG | 1 cut(s) | 234 |
| MspR9I | CCNGG | 2 cut(s) | 240, 432 |
| MvaI | CCWGG | 2 cut(s) | 240, 432 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 264, 273, 452 |
| NcoI | CCATGG | 1 cut(s) | 280 |
| NdeII | GATC | 1 cut(s) | 402 |
| NlaIII | CATG | 3 cut(s) | 284, 319, 352 |
| NmeAIII | GCCGAG | 2 cut(s) | 80, 400 |
| NmuCI | GTSAC | 1 cut(s) | 229 |
| NspI | RCATGY | 1 cut(s) | 319 |
| PaeI | GCATGC | 1 cut(s) | 319 |
| PagI | TCATGA | 1 cut(s) | 348 |
| Psp124BI | GAGCTC | 1 cut(s) | 24 |
| Psp6I | CCWGG | 2 cut(s) | 238, 430 |
| PspGI | CCWGG | 2 cut(s) | 238, 430 |
| PspPI | GGNCC | 1 cut(s) | 236 |
| RsaI | GTAC | 1 cut(s) | 344 |
| RsaNI | GTAC | 1 cut(s) | 343 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| SacI | GAGCTC | 1 cut(s) | 24 |
| SaqAI | TTAA | 1 cut(s) | 302 |
| Sau3AI | GATC | 1 cut(s) | 402 |
| Sau96I | GGNCC | 1 cut(s) | 236 |
| ScrFI | CCNGG | 2 cut(s) | 240, 432 |
| SduI | GDGCHC | 1 cut(s) | 24 |
| SfaNI | GCATC | 3 cut(s) | 133, 350, 442 |
| SinI | GGWCC | 1 cut(s) | 236 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| SphI | GCATGC | 1 cut(s) | 319 |
| SspMI | CTAG | 2 cut(s) | 66, 460 |
| SstI | GAGCTC | 1 cut(s) | 24 |
| StyD4I | CCNGG | 2 cut(s) | 238, 430 |
| StyI | CCWWGG | 1 cut(s) | 280 |
| TaaI | ACNGT | 1 cut(s) | 38 |
| TaiI | ACGT | 1 cut(s) | 348 |
| Tru1I | TTAA | 1 cut(s) | 302 |
| Tru9I | TTAA | 1 cut(s) | 302 |
| TscAI | CASTG | 1 cut(s) | 228 |
| TseFI | GTSAC | 1 cut(s) | 229 |
| Tsp45I | GTSAC | 1 cut(s) | 229 |
| TspDTI | ATGAA | 3 cut(s) | 17, 320, 365 |
| TspRI | CASTG | 1 cut(s) | 228 |
| VpaK11BI | GGWCC | 1 cut(s) | 236 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 435 |
| XceI | RCATGY | 1 cut(s) | 319 |
| XspI | CTAG | 2 cut(s) | 66, 460 |