ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 288, 378 |
| AfaI | GTAC | 2 cut(s) | 151, 197 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 61, 62 |
| AgsI | TTSAA | 2 cut(s) | 10, 428 |
| AluBI | AGCT | 3 cut(s) | 212, 324, 431 |
| AluI | AGCT | 3 cut(s) | 212, 324, 431 |
| Alw26I | GTCTC | 1 cut(s) | 223 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 395 |
| ApoI | RAATTY | 2 cut(s) | 288, 378 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 290, 423 |
| BccI | CCATC | 2 cut(s) | 335, 395 |
| BcoDI | GTCTC | 1 cut(s) | 223 |
| BfaI | CTAG | 1 cut(s) | 99 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BpmI | CTGGAG | 1 cut(s) | 220 |
| Bpu10I | CCTNAGC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 1 cut(s) | 212 |
| BsaI | GGTCTC | 1 cut(s) | 223 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 179, 209 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 61, 62 |
| Bse1I | ACTGG | 2 cut(s) | 105, 203 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 61, 62 |
| BseNI | ACTGG | 2 cut(s) | 105, 203 |
| BseRI | GAGGAG | 1 cut(s) | 200 |
| BsgI | GTGCAG | 1 cut(s) | 151 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 61, 62 |
| BsmAI | GTCTC | 1 cut(s) | 223 |
| Bso31I | GGTCTC | 1 cut(s) | 223 |
| Bsp143I | GATC | 2 cut(s) | 30, 238 |
| BspTNI | GGTCTC | 1 cut(s) | 223 |
| BsrI | ACTGG | 2 cut(s) | 105, 203 |
| BssMI | GATC | 2 cut(s) | 30, 238 |
| Bst4CI | ACNGT | 2 cut(s) | 355, 397 |
| Bst6I | CTCTTC | 1 cut(s) | 429 |
| BstDEI | CTNAG | 1 cut(s) | 213 |
| BstKTI | GATC | 2 cut(s) | 33, 241 |
| BstMAI | GTCTC | 1 cut(s) | 223 |
| BstMBI | GATC | 2 cut(s) | 30, 238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 46 |
| BtsI | GCAGTG | 2 cut(s) | 134, 139 |
| BtsIMutI | CAGTG | 2 cut(s) | 134, 139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 395 |
| Csp6I | GTAC | 2 cut(s) | 150, 196 |
| CviAII | CATG | 2 cut(s) | 26, 222 |
| CviJI | RGCY | 5 cut(s) | 212, 226, 324, 410, 431 |
| CviKI_1 | RGCY | 5 cut(s) | 212, 226, 324, 410, 431 |
| CviQI | GTAC | 2 cut(s) | 150, 196 |
| DdeI | CTNAG | 1 cut(s) | 213 |
| DpnI | GATC | 2 cut(s) | 32, 240 |
| DpnII | GATC | 2 cut(s) | 30, 238 |
| Eam1104I | CTCTTC | 1 cut(s) | 429 |
| EarI | CTCTTC | 1 cut(s) | 429 |
| Eco31I | GGTCTC | 1 cut(s) | 223 |
| FaeI | CATG | 2 cut(s) | 29, 225 |
| FaiI | YATR | 4 cut(s) | 27, 223, 309, 449 |
| FatI | CATG | 2 cut(s) | 25, 221 |
| FspBI | CTAG | 1 cut(s) | 99 |
| GsuI | CTGGAG | 1 cut(s) | 220 |
| Hin1II | CATG | 2 cut(s) | 29, 225 |
| HinfI | GANTC | 1 cut(s) | 202 |
| Hpy166II | GTNNAC | 1 cut(s) | 364 |
| Hpy188I | TCNGA | 2 cut(s) | 184, 207 |
| Hpy8I | GTNNAC | 1 cut(s) | 364 |
| HpyCH4III | ACNGT | 2 cut(s) | 355, 397 |
| HpyCH4IV | ACGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 3 cut(s) | 113, 132, 317 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 46 |
| HpyF3I | CTNAG | 1 cut(s) | 213 |
| HpySE526I | ACGT | 1 cut(s) | 163 |
| Hsp92II | CATG | 2 cut(s) | 29, 225 |
| Kzo9I | GATC | 2 cut(s) | 30, 238 |
| LmnI | GCTCC | 1 cut(s) | 321 |
| LpnPI | CCDG | 8 cut(s) | 47, 65, 69, 118, 184, 303, 310, 375 |
| LweI | GCATC | 1 cut(s) | 304 |
| MaeI | CTAG | 1 cut(s) | 99 |
| MaeII | ACGT | 1 cut(s) | 163 |
| MalI | GATC | 2 cut(s) | 32, 240 |
| MboI | GATC | 2 cut(s) | 30, 238 |
| MboII | GAAGA | 5 cut(s) | 22, 29, 103, 344, 416 |
| MluCI | AATT | 4 cut(s) | 191, 244, 288, 378 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 6 cut(s) | 138, 178, 181, 226, 293, 409 |
| MroXI | GAANNNNTTC | 2 cut(s) | 290, 423 |
| MseI | TTAA | 1 cut(s) | 478 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 46 |
| NdeII | GATC | 2 cut(s) | 30, 238 |
| NlaIII | CATG | 2 cut(s) | 29, 225 |
| PdmI | GAANNNNTTC | 2 cut(s) | 290, 423 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| PstNI | CAGNNNCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 2 cut(s) | 151, 197 |
| RsaNI | GTAC | 2 cut(s) | 150, 196 |
| SaqAI | TTAA | 1 cut(s) | 478 |
| Sau3AI | GATC | 2 cut(s) | 30, 238 |
| SchI | GAGTC | 1 cut(s) | 211 |
| SetI | ASST | 7 cut(s) | 166, 214, 219, 270, 304, 326, 433 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| Sse9I | AATT | 4 cut(s) | 191, 244, 288, 378 |
| SspI | AATATT | 1 cut(s) | 463 |
| SspMI | CTAG | 1 cut(s) | 99 |
| TaaI | ACNGT | 2 cut(s) | 355, 397 |
| TaiI | ACGT | 1 cut(s) | 166 |
| TasI | AATT | 4 cut(s) | 191, 244, 288, 378 |
| TatI | WGTACW | 1 cut(s) | 195 |
| Tru1I | TTAA | 1 cut(s) | 478 |
| Tru9I | TTAA | 1 cut(s) | 478 |
| TscAI | CASTG | 2 cut(s) | 134, 139 |
| TspDTI | ATGAA | 4 cut(s) | 30, 248, 283, 473 |
| TspRI | CASTG | 2 cut(s) | 134, 139 |
| XapI | RAATTY | 2 cut(s) | 288, 378 |
| XmnI | GAANNNNTTC | 2 cut(s) | 290, 423 |
| XspI | CTAG | 1 cut(s) | 99 |