ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 108 |
| AccII | CGCG | 1 cut(s) | 100 |
| AciI | CCGC | 1 cut(s) | 74 |
| AclWI | GGATC | 3 cut(s) | 90, 121, 530 |
| AcsI | RAATTY | 1 cut(s) | 506 |
| AdeI | CACNNNGTG | 1 cut(s) | 428 |
| AfaI | GTAC | 1 cut(s) | 373 |
| AgsI | TTSAA | 5 cut(s) | 220, 505, 512, 521, 590 |
| AjiI | CACGTC | 1 cut(s) | 79 |
| AluBI | AGCT | 3 cut(s) | 149, 604, 608 |
| AluI | AGCT | 3 cut(s) | 149, 604, 608 |
| Alw26I | GTCTC | 1 cut(s) | 52 |
| AlwI | GGATC | 3 cut(s) | 90, 121, 530 |
| ApoI | RAATTY | 1 cut(s) | 506 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 9, 516 |
| AspLEI | GCGC | 1 cut(s) | 109 |
| AsuHPI | GGTGA | 1 cut(s) | 242 |
| AsuII | TTCGAA | 1 cut(s) | 94 |
| AsuNHI | GCTAGC | 1 cut(s) | 604 |
| BbsI | GAAGAC | 1 cut(s) | 12 |
| BccI | CCATC | 1 cut(s) | 385 |
| BcoDI | GTCTC | 1 cut(s) | 52 |
| BfaI | CTAG | 3 cut(s) | 426, 527, 605 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BmgBI | CACGTC | 1 cut(s) | 79 |
| BmrI | ACTGGG | 1 cut(s) | 582 |
| BmsI | GCATC | 4 cut(s) | 31, 109, 118, 220 |
| BmtI | GCTAGC | 1 cut(s) | 608 |
| BmuI | ACTGGG | 1 cut(s) | 582 |
| BpiI | GAAGAC | 1 cut(s) | 12 |
| BpmI | CTGGAG | 1 cut(s) | 88 |
| Bpu14I | TTCGAA | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 1 cut(s) | 130 |
| Bse1I | ACTGG | 1 cut(s) | 577 |
| BseDI | CCNNGG | 1 cut(s) | 130 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseNI | ACTGG | 1 cut(s) | 577 |
| BseYI | CCCAGC | 1 cut(s) | 47 |
| Bsh1236I | CGCG | 1 cut(s) | 100 |
| BsmAI | GTCTC | 1 cut(s) | 52 |
| Bsp119I | TTCGAA | 1 cut(s) | 94 |
| Bsp143I | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| Bsp19I | CCATGG | 1 cut(s) | 130 |
| BspACI | CCGC | 1 cut(s) | 74 |
| BspCNI | CTCAG | 1 cut(s) | 78 |
| BspFNI | CGCG | 1 cut(s) | 100 |
| BspOI | GCTAGC | 1 cut(s) | 608 |
| BspPI | GGATC | 3 cut(s) | 90, 121, 530 |
| BspT104I | TTCGAA | 1 cut(s) | 94 |
| BsrI | ACTGG | 1 cut(s) | 577 |
| BssECI | CCNNGG | 1 cut(s) | 130 |
| BssMI | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| BssT1I | CCWWGG | 1 cut(s) | 130 |
| Bst4CI | ACNGT | 2 cut(s) | 190, 287 |
| BstBI | TTCGAA | 1 cut(s) | 94 |
| BstC8I | GCNNGC | 1 cut(s) | 606 |
| BstDEI | CTNAG | 4 cut(s) | 32, 86, 350, 480 |
| BstDSI | CCRYGG | 1 cut(s) | 130 |
| BstFNI | CGCG | 1 cut(s) | 100 |
| BstHHI | GCGC | 1 cut(s) | 109 |
| BstKTI | GATC | 8 cut(s) | 85, 104, 129, 196, 292, 361, 488, 538 |
| BstMAI | GTCTC | 1 cut(s) | 52 |
| BstMBI | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 106 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstUI | CGCG | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 1 cut(s) | 12 |
| BstX2I | RGATCY | 2 cut(s) | 82, 126 |
| BstYI | RGATCY | 2 cut(s) | 82, 126 |
| BtgI | CCRYGG | 1 cut(s) | 130 |
| BtrI | CACGTC | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 1 cut(s) | 606 |
| CfoI | GCGC | 1 cut(s) | 109 |
| Csp6I | GTAC | 1 cut(s) | 372 |
| CviAII | CATG | 5 cut(s) | 38, 131, 207, 327, 440 |
| CviJI | RGCY | 8 cut(s) | 47, 149, 282, 315, 323, 365, 604, 608 |
| CviKI_1 | RGCY | 8 cut(s) | 47, 149, 282, 315, 323, 365, 604, 608 |
| CviQI | GTAC | 1 cut(s) | 372 |
| DdeI | CTNAG | 4 cut(s) | 32, 86, 350, 480 |
| DpnI | GATC | 8 cut(s) | 84, 103, 128, 195, 291, 360, 487, 537 |
| DpnII | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| DraIII | CACNNNGTG | 1 cut(s) | 428 |
| Eco130I | CCWWGG | 1 cut(s) | 130 |
| EcoT14I | CCWWGG | 1 cut(s) | 130 |
| ErhI | CCWWGG | 1 cut(s) | 130 |
| FaeI | CATG | 5 cut(s) | 41, 134, 210, 330, 443 |
| FatI | CATG | 5 cut(s) | 37, 130, 206, 326, 439 |
| FspBI | CTAG | 3 cut(s) | 426, 527, 605 |
| FspI | TGCGCA | 1 cut(s) | 108 |
| GlaI | GCGC | 1 cut(s) | 108 |
| GsaI | CCCAGC | 1 cut(s) | 51 |
| GsuI | CTGGAG | 1 cut(s) | 88 |
| HhaI | GCGC | 1 cut(s) | 109 |
| Hin1II | CATG | 5 cut(s) | 41, 134, 210, 330, 443 |
| Hin6I | GCGC | 1 cut(s) | 107 |
| HinP1I | GCGC | 1 cut(s) | 107 |
| HinfI | GANTC | 4 cut(s) | 239, 431, 512, 577 |
| HphI | GGTGA | 1 cut(s) | 242 |
| Hpy166II | GTNNAC | 1 cut(s) | 372 |
| Hpy188I | TCNGA | 3 cut(s) | 87, 340, 436 |
| Hpy188III | TCNNGA | 4 cut(s) | 67, 197, 527, 598 |
| Hpy8I | GTNNAC | 1 cut(s) | 372 |
| HpyAV | CCTTC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 190, 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpyCH4V | TGCA | 3 cut(s) | 22, 122, 467 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 106 |
| HpyF3I | CTNAG | 4 cut(s) | 32, 86, 350, 480 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92II | CATG | 5 cut(s) | 41, 134, 210, 330, 443 |
| HspAI | GCGC | 1 cut(s) | 107 |
| Kzo9I | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| LmnI | GCTCC | 1 cut(s) | 459 |
| LpnPI | CCDG | 7 cut(s) | 11, 29, 33, 52, 253, 296, 558 |
| LweI | GCATC | 4 cut(s) | 31, 109, 118, 220 |
| MaeI | CTAG | 3 cut(s) | 426, 527, 605 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MaeIII | GTNAC | 2 cut(s) | 409, 428 |
| MalI | GATC | 8 cut(s) | 84, 103, 128, 195, 291, 360, 487, 537 |
| MboI | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| MboII | GAAGA | 1 cut(s) | 17 |
| MflI | RGATCY | 2 cut(s) | 82, 126 |
| MluCI | AATT | 2 cut(s) | 468, 506 |
| MlyI | GAGTC | 1 cut(s) | 425 |
| MnlI | CCTC | 2 cut(s) | 252, 265 |
| MroXI | GAANNNNTTC | 2 cut(s) | 9, 516 |
| MseI | TTAA | 1 cut(s) | 161 |
| MslI | CAYNNNNRTG | 2 cut(s) | 117, 382 |
| MvnI | CGCG | 1 cut(s) | 100 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 106 |
| NcoI | CCATGG | 1 cut(s) | 130 |
| NdeII | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| NheI | GCTAGC | 1 cut(s) | 604 |
| NlaIII | CATG | 5 cut(s) | 41, 134, 210, 330, 443 |
| NmuCI | GTSAC | 1 cut(s) | 428 |
| NsbI | TGCGCA | 1 cut(s) | 108 |
| NspV | TTCGAA | 1 cut(s) | 94 |
| PdmI | GAANNNNTTC | 2 cut(s) | 9, 516 |
| PfeI | GAWTC | 3 cut(s) | 239, 512, 577 |
| PleI | GAGTC | 1 cut(s) | 425 |
| PpsI | GAGTC | 1 cut(s) | 425 |
| PspFI | CCCAGC | 1 cut(s) | 47 |
| PsuI | RGATCY | 2 cut(s) | 82, 126 |
| RsaI | GTAC | 1 cut(s) | 373 |
| RsaNI | GTAC | 1 cut(s) | 372 |
| RseI | CAYNNNNRTG | 2 cut(s) | 117, 382 |
| SaqAI | TTAA | 1 cut(s) | 161 |
| Sau3AI | GATC | 8 cut(s) | 82, 101, 126, 193, 289, 358, 485, 535 |
| SchI | GAGTC | 1 cut(s) | 425 |
| SetI | ASST | 9 cut(s) | 30, 81, 151, 356, 427, 481, 503, 606, 610 |
| SfaNI | GCATC | 4 cut(s) | 31, 109, 118, 220 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SfuI | TTCGAA | 1 cut(s) | 94 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 117, 382 |
| Sse9I | AATT | 2 cut(s) | 468, 506 |
| SsiI | CCGC | 1 cut(s) | 74 |
| SspMI | CTAG | 3 cut(s) | 426, 527, 605 |
| StyI | CCWWGG | 1 cut(s) | 130 |
| TaaI | ACNGT | 2 cut(s) | 190, 287 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 2 cut(s) | 468, 506 |
| TatI | WGTACW | 1 cut(s) | 371 |
| TfiI | GAWTC | 3 cut(s) | 239, 512, 577 |
| Tru1I | TTAA | 1 cut(s) | 161 |
| Tru9I | TTAA | 1 cut(s) | 161 |
| TseFI | GTSAC | 1 cut(s) | 428 |
| Tsp45I | GTSAC | 1 cut(s) | 428 |
| XapI | RAATTY | 1 cut(s) | 506 |
| XbaI | TCTAGA | 1 cut(s) | 526 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 137 |
| XmnI | GAANNNNTTC | 2 cut(s) | 9, 516 |
| XspI | CTAG | 3 cut(s) | 426, 527, 605 |