ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 27 |
| AciI | CCGC | 3 cut(s) | 25, 27, 176 |
| AclWI | GGATC | 1 cut(s) | 301 |
| AgsI | TTSAA | 4 cut(s) | 53, 61, 74, 136 |
| Alw26I | GTCTC | 1 cut(s) | 264 |
| AlwI | GGATC | 1 cut(s) | 301 |
| ApeKI | GCWGC | 1 cut(s) | 44 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 242, 274 |
| BbvI | GCAGC | 1 cut(s) | 31 |
| BccI | CCATC | 3 cut(s) | 94, 218, 284 |
| BceAI | ACGGC | 1 cut(s) | 32 |
| BcoDI | GTCTC | 1 cut(s) | 264 |
| BisI | GCNGC | 2 cut(s) | 25, 45 |
| BlsI | GCNGC | 2 cut(s) | 26, 46 |
| BmrI | ACTGGG | 1 cut(s) | 133 |
| BmuI | ACTGGG | 1 cut(s) | 133 |
| Bsa29I | ATCGAT | 1 cut(s) | 89 |
| BsaBI | GATNNNNATC | 1 cut(s) | 250 |
| BsaJI | CCNNGG | 1 cut(s) | 25 |
| Bse1I | ACTGG | 1 cut(s) | 128 |
| Bse8I | GATNNNNATC | 1 cut(s) | 250 |
| BseCI | ATCGAT | 1 cut(s) | 89 |
| BseDI | CCNNGG | 1 cut(s) | 25 |
| BseGI | GGATG | 2 cut(s) | 124, 274 |
| BseJI | GATNNNNATC | 1 cut(s) | 250 |
| BseNI | ACTGG | 1 cut(s) | 128 |
| BseXI | GCAGC | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 27 |
| Bsh1285I | CGRYCG | 1 cut(s) | 248 |
| BshVI | ATCGAT | 1 cut(s) | 89 |
| BsiEI | CGRYCG | 1 cut(s) | 248 |
| BsmAI | GTCTC | 1 cut(s) | 264 |
| BsmBI | CGTCTC | 1 cut(s) | 264 |
| Bsp143I | GATC | 3 cut(s) | 90, 245, 293 |
| BspACI | CCGC | 3 cut(s) | 25, 27, 176 |
| BspDI | ATCGAT | 1 cut(s) | 89 |
| BspFNI | CGCG | 1 cut(s) | 27 |
| BspPI | GGATC | 1 cut(s) | 301 |
| BsrI | ACTGG | 1 cut(s) | 128 |
| BssECI | CCNNGG | 1 cut(s) | 25 |
| BssMI | GATC | 3 cut(s) | 90, 245, 293 |
| BstC8I | GCNNGC | 1 cut(s) | 322 |
| BstDSI | CCRYGG | 1 cut(s) | 25 |
| BstF5I | GGATG | 2 cut(s) | 124, 274 |
| BstFNI | CGCG | 1 cut(s) | 27 |
| BstKTI | GATC | 3 cut(s) | 93, 248, 296 |
| BstMAI | GTCTC | 1 cut(s) | 264 |
| BstMBI | GATC | 3 cut(s) | 90, 245, 293 |
| BstMCI | CGRYCG | 1 cut(s) | 248 |
| BstUI | CGCG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 1 cut(s) | 31 |
| BstX2I | RGATCY | 1 cut(s) | 293 |
| BstYI | RGATCY | 1 cut(s) | 293 |
| Bsu15I | ATCGAT | 1 cut(s) | 89 |
| BsuTUI | ATCGAT | 1 cut(s) | 89 |
| BtgI | CCRYGG | 1 cut(s) | 25 |
| BtsCI | GGATG | 2 cut(s) | 124, 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 190 |
| Cac8I | GCNNGC | 1 cut(s) | 322 |
| Cfr42I | CCGCGG | 1 cut(s) | 28 |
| ClaI | ATCGAT | 1 cut(s) | 89 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 186, 221 |
| CviAII | CATG | 1 cut(s) | 263 |
| CviJI | RGCY | 5 cut(s) | 14, 44, 159, 221, 284 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 44, 159, 221, 284 |
| DpnI | GATC | 3 cut(s) | 92, 247, 295 |
| DpnII | GATC | 3 cut(s) | 90, 245, 293 |
| Eco32I | GATATC | 1 cut(s) | 235 |
| EcoRV | GATATC | 1 cut(s) | 235 |
| Esp3I | CGTCTC | 1 cut(s) | 264 |
| FaeI | CATG | 1 cut(s) | 266 |
| FaiI | YATR | 3 cut(s) | 264, 326, 328 |
| FatI | CATG | 1 cut(s) | 262 |
| FauI | CCCGC | 1 cut(s) | 20 |
| Fnu4HI | GCNGC | 2 cut(s) | 25, 45 |
| FokI | GGATG | 2 cut(s) | 131, 281 |
| Fsp4HI | GCNGC | 2 cut(s) | 25, 45 |
| GluI | GCNGC | 2 cut(s) | 25, 45 |
| Hin1II | CATG | 1 cut(s) | 266 |
| HinfI | GANTC | 1 cut(s) | 66 |
| Hpy188I | TCNGA | 3 cut(s) | 106, 245, 289 |
| Hpy188III | TCNNGA | 1 cut(s) | 163 |
| Hpy99I | CGWCG | 1 cut(s) | 259 |
| HpyAV | CCTTC | 1 cut(s) | 106 |
| Hsp92II | CATG | 1 cut(s) | 266 |
| KspI | CCGCGG | 1 cut(s) | 28 |
| Kzo9I | GATC | 3 cut(s) | 90, 245, 293 |
| LpnPI | CCDG | 5 cut(s) | 26, 109, 176, 202, 282 |
| Lsp1109I | GCAGC | 1 cut(s) | 31 |
| MaeIII | GTNAC | 1 cut(s) | 147 |
| MalI | GATC | 3 cut(s) | 92, 247, 295 |
| MboI | GATC | 3 cut(s) | 90, 245, 293 |
| MflI | RGATCY | 1 cut(s) | 293 |
| MluCI | AATT | 2 cut(s) | 19, 166 |
| MlyI | GAGTC | 1 cut(s) | 60 |
| MnlI | CCTC | 2 cut(s) | 181, 268 |
| MseI | TTAA | 2 cut(s) | 33, 143 |
| MslI | CAYNNNNRTG | 1 cut(s) | 267 |
| MspA1I | CMGCKG | 1 cut(s) | 27 |
| MvnI | CGCG | 1 cut(s) | 27 |
| NdeII | GATC | 3 cut(s) | 90, 245, 293 |
| NlaIII | CATG | 1 cut(s) | 266 |
| NmeAIII | GCCGAG | 1 cut(s) | 135 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 254 |
| PkrI | GCNGC | 2 cut(s) | 26, 46 |
| Ple19I | CGATCG | 1 cut(s) | 248 |
| PleI | GAGTC | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 60 |
| PsuI | RGATCY | 1 cut(s) | 293 |
| PvuI | CGATCG | 1 cut(s) | 248 |
| RseI | CAYNNNNRTG | 1 cut(s) | 267 |
| SacII | CCGCGG | 1 cut(s) | 28 |
| SaqAI | TTAA | 2 cut(s) | 33, 143 |
| SatI | GCNGC | 2 cut(s) | 25, 45 |
| Sau3AI | GATC | 3 cut(s) | 90, 245, 293 |
| SchI | GAGTC | 1 cut(s) | 60 |
| SetI | ASST | 4 cut(s) | 9, 117, 149, 279 |
| Sfr303I | CCGCGG | 1 cut(s) | 28 |
| SgrBI | CCGCGG | 1 cut(s) | 28 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 267 |
| Sse9I | AATT | 2 cut(s) | 19, 166 |
| SsiI | CCGC | 3 cut(s) | 25, 27, 176 |
| SspI | AATATT | 1 cut(s) | 131 |
| TaqI | TCGA | 2 cut(s) | 89, 248 |
| TasI | AATT | 2 cut(s) | 19, 166 |
| TauI | GCSGC | 1 cut(s) | 27 |
| Tru1I | TTAA | 2 cut(s) | 33, 143 |
| Tru9I | TTAA | 2 cut(s) | 33, 143 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TseI | GCWGC | 1 cut(s) | 44 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 190 |