Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 264 |
| Acc36I | ACCTGC | 1 cut(s) | 701 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 462 |
| AclWI | GGATC | 2 cut(s) | 44, 282 |
| AcoI | YGGCCR | 1 cut(s) | 529 |
| AcsI | RAATTY | 1 cut(s) | 466 |
| AdeI | CACNNNGTG | 1 cut(s) | 462 |
| AfaI | GTAC | 2 cut(s) | 598, 725 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 462 |
| AgsI | TTSAA | 4 cut(s) | 67, 331, 637, 668 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 292, 324 |
| AluBI | AGCT | 2 cut(s) | 481, 692 |
| AluI | AGCT | 2 cut(s) | 481, 692 |
| Alw26I | GTCTC | 1 cut(s) | 414 |
| AlwI | GGATC | 2 cut(s) | 44, 282 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 260 |
| AoxI | GGCC | 2 cut(s) | 196, 529 |
| ApeKI | GCWGC | 1 cut(s) | 155 |
| ApoI | RAATTY | 1 cut(s) | 466 |
| AspLEI | GCGC | 2 cut(s) | 265, 604 |
| AspS9I | GGNCC | 2 cut(s) | 365, 446 |
| AsuHPI | GGTGA | 1 cut(s) | 620 |
| AvaII | GGWCC | 2 cut(s) | 365, 446 |
| BalI | TGGCCA | 1 cut(s) | 531 |
| BbvI | GCAGC | 1 cut(s) | 142 |
| BcoDI | GTCTC | 1 cut(s) | 414 |
| BfaI | CTAG | 3 cut(s) | 434, 699, 727 |
| BfuAI | ACCTGC | 1 cut(s) | 701 |
| BisI | GCNGC | 1 cut(s) | 156 |
| BlsI | GCNGC | 1 cut(s) | 157 |
| BmcAI | AGTACT | 1 cut(s) | 598 |
| Bme18I | GGWCC | 2 cut(s) | 365, 446 |
| BmgT120I | GGNCC | 2 cut(s) | 365, 446 |
| BmiI | GGNNCC | 2 cut(s) | 366, 447 |
| BmsI | GCATC | 3 cut(s) | 274, 394, 664 |
| BsaWI | WCCGGW | 1 cut(s) | 367 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 462 |
| Bse118I | RCCGGY | 1 cut(s) | 508 |
| BseGI | GGATG | 3 cut(s) | 16, 222, 709 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 462 |
| BseXI | GCAGC | 1 cut(s) | 142 |
| BsgI | GTGCAG | 1 cut(s) | 487 |
| BshFI | GGCC | 2 cut(s) | 198, 531 |
| BsiSI | CCGG | 2 cut(s) | 368, 509 |
| BslFI | GGGAC | 1 cut(s) | 459 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 462 |
| BsmAI | GTCTC | 1 cut(s) | 414 |
| BsmFI | GGGAC | 1 cut(s) | 459 |
| BsnI | GGCC | 2 cut(s) | 198, 531 |
| Bsp143I | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| BspANI | GGCC | 2 cut(s) | 198, 531 |
| BspLI | GGNNCC | 2 cut(s) | 366, 447 |
| BspMI | ACCTGC | 1 cut(s) | 701 |
| BspPI | GGATC | 2 cut(s) | 44, 282 |
| BsrFI | RCCGGY | 1 cut(s) | 508 |
| BssAI | RCCGGY | 1 cut(s) | 508 |
| BssMI | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| Bst4CI | ACNGT | 2 cut(s) | 256, 632 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 599 |
| BstC8I | GCNNGC | 2 cut(s) | 506, 510 |
| BstDEI | CTNAG | 2 cut(s) | 17, 487 |
| BstF5I | GGATG | 3 cut(s) | 16, 222, 709 |
| BstHHI | GCGC | 2 cut(s) | 265, 604 |
| BstKTI | GATC | 5 cut(s) | 39, 73, 249, 277, 433 |
| BstMAI | GTCTC | 1 cut(s) | 414 |
| BstMBI | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 152, 599 |
| BstNSI | RCATGY | 1 cut(s) | 593 |
| BstV1I | GCAGC | 1 cut(s) | 142 |
| BstX2I | RGATCY | 2 cut(s) | 36, 274 |
| BstYI | RGATCY | 2 cut(s) | 36, 274 |
| BsuRI | GGCC | 2 cut(s) | 198, 531 |
| BtgZI | GCGATG | 1 cut(s) | 306 |
| BtsCI | GGATG | 3 cut(s) | 16, 222, 709 |
| BtsI | GCAGTG | 1 cut(s) | 684 |
| BtsIMutI | CAGTG | 2 cut(s) | 261, 684 |
| BveI | ACCTGC | 1 cut(s) | 701 |
| Cac8I | GCNNGC | 2 cut(s) | 506, 510 |
| CaiI | CAGNNNCTG | 1 cut(s) | 260 |
| CfoI | GCGC | 2 cut(s) | 265, 604 |
| Cfr10I | RCCGGY | 1 cut(s) | 508 |
| Cfr13I | GGNCC | 2 cut(s) | 365, 446 |
| Csp6I | GTAC | 2 cut(s) | 597, 724 |
| CviAII | CATG | 4 cut(s) | 173, 533, 572, 590 |
| CviJI | RGCY | 7 cut(s) | 62, 198, 481, 512, 531, 647, 692 |
| CviKI_1 | RGCY | 7 cut(s) | 62, 198, 481, 512, 531, 647, 692 |
| CviQI | GTAC | 2 cut(s) | 597, 724 |
| DdeI | CTNAG | 2 cut(s) | 17, 487 |
| DpnI | GATC | 5 cut(s) | 38, 72, 248, 276, 432 |
| DpnII | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| DraIII | CACNNNGTG | 1 cut(s) | 462 |
| EaeI | YGGCCR | 1 cut(s) | 529 |
| Eco47I | GGWCC | 2 cut(s) | 365, 446 |
| EcoO109I | RGGNCCY | 1 cut(s) | 446 |
| EcoRI | GAATTC | 1 cut(s) | 466 |
| FaeI | CATG | 4 cut(s) | 176, 536, 575, 593 |
| FaqI | GGGAC | 1 cut(s) | 459 |
| FatI | CATG | 4 cut(s) | 172, 532, 571, 589 |
| FauNDI | CATATG | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 1 cut(s) | 156 |
| FokI | GGATG | 3 cut(s) | 23, 229, 716 |
| Fsp4HI | GCNGC | 1 cut(s) | 156 |
| FspBI | CTAG | 3 cut(s) | 434, 699, 727 |
| FspI | TGCGCA | 1 cut(s) | 264 |
| GlaI | GCGC | 2 cut(s) | 264, 603 |
| GluI | GCNGC | 1 cut(s) | 156 |
| HaeIII | GGCC | 2 cut(s) | 198, 531 |
| HapII | CCGG | 2 cut(s) | 368, 509 |
| HhaI | GCGC | 2 cut(s) | 265, 604 |
| Hin1II | CATG | 4 cut(s) | 176, 536, 575, 593 |
| Hin6I | GCGC | 2 cut(s) | 263, 602 |
| HinP1I | GCGC | 2 cut(s) | 263, 602 |
| HinfI | GANTC | 1 cut(s) | 396 |
| HpaII | CCGG | 2 cut(s) | 368, 509 |
| HphI | GGTGA | 1 cut(s) | 620 |
| Hpy188I | TCNGA | 2 cut(s) | 136, 472 |
| Hpy188III | TCNNGA | 2 cut(s) | 250, 665 |
| HpyAV | CCTTC | 1 cut(s) | 158 |
| HpyCH4III | ACNGT | 2 cut(s) | 256, 632 |
| HpyCH4V | TGCA | 5 cut(s) | 42, 504, 593, 677, 710 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 152, 599 |
| HpyF3I | CTNAG | 2 cut(s) | 17, 487 |
| Hsp92II | CATG | 4 cut(s) | 176, 536, 575, 593 |
| HspAI | GCGC | 2 cut(s) | 263, 602 |
| KroI | GCCGGC | 1 cut(s) | 508 |
| KroNI | GCCGGC | 1 cut(s) | 510 |
| Kzo9I | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| LpnPI | CCDG | 8 cut(s) | 189, 224, 235, 347, 381, 428, 522, 696 |
| Lsp1109I | GCAGC | 1 cut(s) | 142 |
| LweI | GCATC | 3 cut(s) | 274, 394, 664 |
| MaeI | CTAG | 3 cut(s) | 434, 699, 727 |
| MaeIII | GTNAC | 2 cut(s) | 626, 654 |
| MalI | GATC | 5 cut(s) | 38, 72, 248, 276, 432 |
| MboI | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| MboII | GAAGA | 2 cut(s) | 367, 628 |
| MflI | RGATCY | 2 cut(s) | 36, 274 |
| MlsI | TGGCCA | 1 cut(s) | 531 |
| MluCI | AATT | 2 cut(s) | 25, 466 |
| MluNI | TGGCCA | 1 cut(s) | 531 |
| MmeI | TCCRAC | 2 cut(s) | 277, 290 |
| MnlI | CCTC | 7 cut(s) | 26, 102, 180, 315, 350, 459, 637 |
| Mox20I | TGGCCA | 1 cut(s) | 531 |
| MroNI | GCCGGC | 1 cut(s) | 508 |
| MscI | TGGCCA | 1 cut(s) | 531 |
| MseI | TTAA | 1 cut(s) | 141 |
| Msp20I | TGGCCA | 1 cut(s) | 531 |
| MspI | CCGG | 2 cut(s) | 368, 509 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 152, 599 |
| NaeI | GCCGGC | 1 cut(s) | 510 |
| NdeI | CATATG | 1 cut(s) | 270 |
| NdeII | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| NgoMIV | GCCGGC | 1 cut(s) | 508 |
| NlaIII | CATG | 4 cut(s) | 176, 536, 575, 593 |
| NlaIV | GGNNCC | 2 cut(s) | 366, 447 |
| NmuCI | GTSAC | 1 cut(s) | 626 |
| NsbI | TGCGCA | 1 cut(s) | 264 |
| NspI | RCATGY | 1 cut(s) | 593 |
| PdiI | GCCGGC | 1 cut(s) | 510 |
| PfeI | GAWTC | 1 cut(s) | 396 |
| PflFI | GACNNNGTC | 1 cut(s) | 256 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 462 |
| PkrI | GCNGC | 1 cut(s) | 157 |
| PpuMI | RGGWCCY | 1 cut(s) | 446 |
| Psp5II | RGGWCCY | 1 cut(s) | 446 |
| PspN4I | GGNNCC | 2 cut(s) | 366, 447 |
| PspPI | GGNCC | 2 cut(s) | 365, 446 |
| PspPPI | RGGWCCY | 1 cut(s) | 446 |
| PstNI | CAGNNNCTG | 1 cut(s) | 260 |
| PsuI | RGATCY | 2 cut(s) | 36, 274 |
| PsyI | GACNNNGTC | 1 cut(s) | 256 |
| RsaI | GTAC | 2 cut(s) | 598, 725 |
| RsaNI | GTAC | 2 cut(s) | 597, 724 |
| SaqAI | TTAA | 1 cut(s) | 141 |
| SatI | GCNGC | 1 cut(s) | 156 |
| Sau3AI | GATC | 5 cut(s) | 36, 70, 246, 274, 430 |
| Sau96I | GGNCC | 2 cut(s) | 365, 446 |
| ScaI | AGTACT | 1 cut(s) | 598 |
| SetI | ASST | 5 cut(s) | 415, 451, 483, 694, 715 |
| SfaNI | GCATC | 3 cut(s) | 274, 394, 664 |
| SinI | GGWCC | 2 cut(s) | 365, 446 |
| Sse9I | AATT | 2 cut(s) | 25, 466 |
| SspMI | CTAG | 3 cut(s) | 434, 699, 727 |
| TaaI | ACNGT | 2 cut(s) | 256, 632 |
| TaqI | TCGA | 3 cut(s) | 373, 538, 642 |
| TasI | AATT | 2 cut(s) | 25, 466 |
| TatI | WGTACW | 2 cut(s) | 596, 723 |
| TfiI | GAWTC | 1 cut(s) | 396 |
| Tru1I | TTAA | 1 cut(s) | 141 |
| Tru9I | TTAA | 1 cut(s) | 141 |
| TscAI | CASTG | 2 cut(s) | 261, 684 |
| TseFI | GTSAC | 1 cut(s) | 626 |
| TseI | GCWGC | 1 cut(s) | 155 |
| Tsp45I | GTSAC | 1 cut(s) | 626 |
| TspDTI | ATGAA | 1 cut(s) | 348 |
| TspGWI | ACGGA | 1 cut(s) | 389 |
| TspRI | CASTG | 2 cut(s) | 261, 684 |
| Tth111I | GACNNNGTC | 1 cut(s) | 256 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 462 |
| VpaK11BI | GGWCC | 2 cut(s) | 365, 446 |
| XapI | RAATTY | 1 cut(s) | 466 |
| XceI | RCATGY | 1 cut(s) | 593 |
| XspI | CTAG | 3 cut(s) | 434, 699, 727 |
| ZrmI | AGTACT | 1 cut(s) | 598 |