ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 136 |
| AciI | CCGC | 2 cut(s) | 205, 328 |
| AfaI | GTAC | 1 cut(s) | 362 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 136, 162 |
| AgsI | TTSAA | 2 cut(s) | 34, 103 |
| AjnI | CCWGG | 4 cut(s) | 129, 135, 173, 224 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 136 |
| ApeKI | GCWGC | 1 cut(s) | 312 |
| AspS9I | GGNCC | 1 cut(s) | 133 |
| AvaII | GGWCC | 1 cut(s) | 133 |
| BbvI | GCAGC | 1 cut(s) | 324 |
| BciT130I | CCWGG | 4 cut(s) | 131, 137, 175, 226 |
| BfaI | CTAG | 1 cut(s) | 364 |
| BisI | GCNGC | 1 cut(s) | 313 |
| BlsI | GCNGC | 1 cut(s) | 314 |
| BmcAI | AGTACT | 1 cut(s) | 362 |
| Bme1390I | CCNGG | 4 cut(s) | 131, 137, 175, 226 |
| Bme18I | GGWCC | 1 cut(s) | 133 |
| BmgT120I | GGNCC | 1 cut(s) | 133 |
| BmrFI | CCNGG | 4 cut(s) | 131, 137, 175, 226 |
| BmrI | ACTGGG | 1 cut(s) | 311 |
| BmsI | GCATC | 1 cut(s) | 223 |
| BmuI | ACTGGG | 1 cut(s) | 311 |
| BoxI | GACNNNNGTC | 1 cut(s) | 164 |
| BpmI | CTGGAG | 1 cut(s) | 113 |
| BsaJI | CCNNGG | 2 cut(s) | 11, 136 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 136, 162 |
| Bse1I | ACTGG | 1 cut(s) | 317 |
| Bse3DI | GCAATG | 1 cut(s) | 117 |
| BseBI | CCWGG | 4 cut(s) | 131, 137, 175, 226 |
| BseDI | CCNNGG | 2 cut(s) | 11, 136 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 136, 162 |
| BseMI | GCAATG | 1 cut(s) | 117 |
| BseMII | CTCAG | 1 cut(s) | 291 |
| BseNI | ACTGG | 1 cut(s) | 317 |
| BseRI | GAGGAG | 1 cut(s) | 287 |
| BseXI | GCAGC | 1 cut(s) | 324 |
| BsgI | GTGCAG | 1 cut(s) | 331 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 136, 162 |
| BspACI | CCGC | 2 cut(s) | 205, 328 |
| BspCNI | CTCAG | 1 cut(s) | 290 |
| BsrDI | GCAATG | 1 cut(s) | 117 |
| BsrI | ACTGG | 1 cut(s) | 317 |
| BssECI | CCNNGG | 2 cut(s) | 11, 136 |
| Bst2UI | CCWGG | 4 cut(s) | 131, 137, 175, 226 |
| Bst4CI | ACNGT | 1 cut(s) | 122 |
| BstDEI | CTNAG | 1 cut(s) | 277 |
| BstDSI | CCRYGG | 1 cut(s) | 11 |
| BstNI | CCWGG | 4 cut(s) | 131, 137, 175, 226 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 164 |
| BstSCI | CCNGG | 4 cut(s) | 129, 135, 173, 224 |
| BstV1I | GCAGC | 1 cut(s) | 324 |
| BtgI | CCRYGG | 1 cut(s) | 11 |
| CaiI | CAGNNNCTG | 1 cut(s) | 136 |
| Cfr13I | GGNCC | 1 cut(s) | 133 |
| Csp6I | GTAC | 1 cut(s) | 361 |
| CviAII | CATG | 1 cut(s) | 284 |
| CviJI | RGCY | 1 cut(s) | 315 |
| CviKI_1 | RGCY | 1 cut(s) | 315 |
| CviQI | GTAC | 1 cut(s) | 361 |
| DdeI | CTNAG | 1 cut(s) | 277 |
| Eco47I | GGWCC | 1 cut(s) | 133 |
| EcoO109I | RGGNCCY | 1 cut(s) | 133 |
| EcoRII | CCWGG | 4 cut(s) | 129, 135, 173, 224 |
| FaeI | CATG | 1 cut(s) | 287 |
| FaiI | YATR | 4 cut(s) | 51, 273, 285, 335 |
| FatI | CATG | 1 cut(s) | 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 313 |
| Fsp4HI | GCNGC | 1 cut(s) | 313 |
| FspBI | CTAG | 1 cut(s) | 364 |
| GluI | GCNGC | 1 cut(s) | 313 |
| GsuI | CTGGAG | 1 cut(s) | 113 |
| Hin1II | CATG | 1 cut(s) | 287 |
| HinfI | GANTC | 2 cut(s) | 221, 266 |
| Hpy188I | TCNGA | 1 cut(s) | 280 |
| HpyCH4III | ACNGT | 1 cut(s) | 122 |
| HpyCH4V | TGCA | 1 cut(s) | 312 |
| HpyF3I | CTNAG | 1 cut(s) | 277 |
| Hsp92II | CATG | 1 cut(s) | 287 |
| Lsp1109I | GCAGC | 1 cut(s) | 324 |
| LweI | GCATC | 1 cut(s) | 223 |
| MaeI | CTAG | 1 cut(s) | 364 |
| MaeIII | GTNAC | 2 cut(s) | 166, 319 |
| MluCI | AATT | 2 cut(s) | 186, 291 |
| MlyI | GAGTC | 2 cut(s) | 215, 275 |
| MnlI | CCTC | 4 cut(s) | 59, 100, 308, 349 |
| MseI | TTAA | 2 cut(s) | 189, 249 |
| MspR9I | CCNGG | 4 cut(s) | 131, 137, 175, 226 |
| MvaI | CCWGG | 4 cut(s) | 131, 137, 175, 226 |
| NlaIII | CATG | 1 cut(s) | 287 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 136 |
| PfoI | TCCNGGA | 3 cut(s) | 129, 173, 224 |
| PkrI | GCNGC | 1 cut(s) | 314 |
| PleI | GAGTC | 2 cut(s) | 215, 274 |
| PpsI | GAGTC | 2 cut(s) | 215, 274 |
| PpuMI | RGGWCCY | 1 cut(s) | 133 |
| PshAI | GACNNNNGTC | 1 cut(s) | 164 |
| Psp5II | RGGWCCY | 1 cut(s) | 133 |
| Psp6I | CCWGG | 4 cut(s) | 129, 135, 173, 224 |
| PspGI | CCWGG | 4 cut(s) | 129, 135, 173, 224 |
| PspPI | GGNCC | 1 cut(s) | 133 |
| PspPPI | RGGWCCY | 1 cut(s) | 133 |
| PstNI | CAGNNNCTG | 1 cut(s) | 136 |
| RsaI | GTAC | 1 cut(s) | 362 |
| RsaNI | GTAC | 1 cut(s) | 361 |
| SaqAI | TTAA | 2 cut(s) | 189, 249 |
| SatI | GCNGC | 1 cut(s) | 313 |
| Sau96I | GGNCC | 1 cut(s) | 133 |
| ScaI | AGTACT | 1 cut(s) | 362 |
| SchI | GAGTC | 2 cut(s) | 215, 275 |
| ScrFI | CCNGG | 4 cut(s) | 131, 137, 175, 226 |
| SetI | ASST | 4 cut(s) | 63, 70, 138, 255 |
| SfaNI | GCATC | 1 cut(s) | 223 |
| SinI | GGWCC | 1 cut(s) | 133 |
| Sse9I | AATT | 2 cut(s) | 186, 291 |
| SsiI | CCGC | 2 cut(s) | 205, 328 |
| SspMI | CTAG | 1 cut(s) | 364 |
| StyD4I | CCNGG | 4 cut(s) | 129, 135, 173, 224 |
| TaaI | ACNGT | 1 cut(s) | 122 |
| TasI | AATT | 2 cut(s) | 186, 291 |
| TatI | WGTACW | 1 cut(s) | 360 |
| Tru1I | TTAA | 2 cut(s) | 189, 249 |
| Tru9I | TTAA | 2 cut(s) | 189, 249 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 312 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 1 cut(s) | 322 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 133 |
| XspI | CTAG | 1 cut(s) | 364 |
| ZrmI | AGTACT | 1 cut(s) | 362 |