ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 110 |
| AciI | CCGC | 1 cut(s) | 30 |
| AcsI | RAATTY | 1 cut(s) | 79 |
| AcuI | CTGAAG | 1 cut(s) | 124 |
| AdeI | CACNNNGTG | 1 cut(s) | 173 |
| AfaI | GTAC | 3 cut(s) | 118, 211, 313 |
| AluBI | AGCT | 2 cut(s) | 94, 206 |
| AluI | AGCT | 2 cut(s) | 94, 206 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| ApeKI | GCWGC | 3 cut(s) | 27, 268, 271 |
| ApoI | RAATTY | 1 cut(s) | 79 |
| AspA2I | CCTAGG | 1 cut(s) | 22 |
| AsuHPI | GGTGA | 2 cut(s) | 44, 290 |
| AvrII | CCTAGG | 1 cut(s) | 22 |
| BbvI | GCAGC | 3 cut(s) | 14, 255, 283 |
| BccI | CCATC | 1 cut(s) | 281 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 202, 236 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfaI | CTAG | 3 cut(s) | 23, 57, 207 |
| BfmI | CTRYAG | 1 cut(s) | 269 |
| BisI | GCNGC | 3 cut(s) | 28, 269, 272 |
| BlnI | CCTAGG | 1 cut(s) | 22 |
| BlsI | GCNGC | 3 cut(s) | 29, 270, 273 |
| BmiI | GGNNCC | 1 cut(s) | 11 |
| BmsI | GCATC | 1 cut(s) | 7 |
| BsaJI | CCNNGG | 1 cut(s) | 22 |
| Bse1I | ACTGG | 1 cut(s) | 269 |
| BseDI | CCNNGG | 1 cut(s) | 22 |
| BseMII | CTCAG | 2 cut(s) | 109, 192 |
| BseNI | ACTGG | 1 cut(s) | 269 |
| BseXI | GCAGC | 3 cut(s) | 14, 255, 283 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| Bsp1407I | TGTACA | 1 cut(s) | 116 |
| BspACI | CCGC | 1 cut(s) | 30 |
| BspCNI | CTCAG | 2 cut(s) | 108, 191 |
| BspLI | GGNNCC | 1 cut(s) | 11 |
| BspMAI | CTGCAG | 1 cut(s) | 273 |
| BsrGI | TGTACA | 1 cut(s) | 116 |
| BsrI | ACTGG | 1 cut(s) | 269 |
| BssECI | CCNNGG | 1 cut(s) | 22 |
| BssT1I | CCWWGG | 1 cut(s) | 22 |
| Bst4CI | ACNGT | 2 cut(s) | 242, 278 |
| BstAUI | TGTACA | 1 cut(s) | 116 |
| BstDEI | CTNAG | 2 cut(s) | 95, 178 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstSFI | CTRYAG | 1 cut(s) | 269 |
| BstV1I | GCAGC | 3 cut(s) | 14, 255, 283 |
| Csp6I | GTAC | 3 cut(s) | 117, 210, 312 |
| CviAII | CATG | 1 cut(s) | 146 |
| CviJI | RGCY | 6 cut(s) | 27, 94, 206, 260, 268, 305 |
| CviKI_1 | RGCY | 6 cut(s) | 27, 94, 206, 260, 268, 305 |
| CviQI | GTAC | 3 cut(s) | 117, 210, 312 |
| DdeI | CTNAG | 2 cut(s) | 95, 178 |
| DraIII | CACNNNGTG | 1 cut(s) | 173 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 110 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 110 |
| Eco130I | CCWWGG | 1 cut(s) | 22 |
| Eco57I | CTGAAG | 1 cut(s) | 124 |
| EcoRI | GAATTC | 1 cut(s) | 79 |
| EcoT14I | CCWWGG | 1 cut(s) | 22 |
| ErhI | CCWWGG | 1 cut(s) | 22 |
| FaeI | CATG | 1 cut(s) | 149 |
| FaiI | YATR | 4 cut(s) | 147, 237, 320, 322 |
| FatI | CATG | 1 cut(s) | 145 |
| Fnu4HI | GCNGC | 3 cut(s) | 28, 269, 272 |
| Fsp4HI | GCNGC | 3 cut(s) | 28, 269, 272 |
| FspBI | CTAG | 3 cut(s) | 23, 57, 207 |
| GluI | GCNGC | 3 cut(s) | 28, 269, 272 |
| Hin1II | CATG | 1 cut(s) | 149 |
| HinfI | GANTC | 4 cut(s) | 176, 193, 214, 246 |
| HphI | GGTGA | 2 cut(s) | 44, 290 |
| Hpy166II | GTNNAC | 2 cut(s) | 119, 312 |
| Hpy188I | TCNGA | 6 cut(s) | 14, 85, 98, 181, 192, 251 |
| Hpy8I | GTNNAC | 2 cut(s) | 119, 312 |
| Hpy99I | CGWCG | 1 cut(s) | 246 |
| HpyAV | CCTTC | 1 cut(s) | 132 |
| HpyCH4III | ACNGT | 2 cut(s) | 242, 278 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 271 |
| HpyF3I | CTNAG | 2 cut(s) | 95, 178 |
| Hsp92II | CATG | 1 cut(s) | 149 |
| LpnPI | CCDG | 1 cut(s) | 250 |
| Lsp1109I | GCAGC | 3 cut(s) | 14, 255, 283 |
| LweI | GCATC | 1 cut(s) | 7 |
| MaeI | CTAG | 3 cut(s) | 23, 57, 207 |
| MaeIII | GTNAC | 3 cut(s) | 32, 131, 173 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MluCI | AATT | 1 cut(s) | 79 |
| MlyI | GAGTC | 2 cut(s) | 170, 208 |
| MmeI | TCCRAC | 1 cut(s) | 21 |
| MnlI | CCTC | 3 cut(s) | 72, 250, 295 |
| MseI | TTAA | 1 cut(s) | 164 |
| NlaIII | CATG | 1 cut(s) | 149 |
| NlaIV | GGNNCC | 1 cut(s) | 11 |
| NmuCI | GTSAC | 3 cut(s) | 32, 131, 173 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 238 |
| PfeI | GAWTC | 2 cut(s) | 193, 246 |
| PkrI | GCNGC | 3 cut(s) | 29, 270, 273 |
| PleI | GAGTC | 2 cut(s) | 170, 208 |
| PpsI | GAGTC | 2 cut(s) | 170, 208 |
| PspN4I | GGNNCC | 1 cut(s) | 11 |
| PstI | CTGCAG | 1 cut(s) | 273 |
| RsaI | GTAC | 3 cut(s) | 118, 211, 313 |
| RsaNI | GTAC | 3 cut(s) | 117, 210, 312 |
| SaqAI | TTAA | 1 cut(s) | 164 |
| SatI | GCNGC | 3 cut(s) | 28, 269, 272 |
| SchI | GAGTC | 2 cut(s) | 170, 208 |
| SetI | ASST | 3 cut(s) | 96, 124, 208 |
| SfaNI | GCATC | 1 cut(s) | 7 |
| SfcI | CTRYAG | 1 cut(s) | 269 |
| Sse9I | AATT | 1 cut(s) | 79 |
| SsiI | CCGC | 1 cut(s) | 30 |
| SspMI | CTAG | 3 cut(s) | 23, 57, 207 |
| StyI | CCWWGG | 1 cut(s) | 22 |
| TaaI | ACNGT | 2 cut(s) | 242, 278 |
| TaqI | TCGA | 1 cut(s) | 244 |
| TasI | AATT | 1 cut(s) | 79 |
| TatI | WGTACW | 2 cut(s) | 116, 311 |
| TfiI | GAWTC | 2 cut(s) | 193, 246 |
| Tru1I | TTAA | 1 cut(s) | 164 |
| Tru9I | TTAA | 1 cut(s) | 164 |
| TseFI | GTSAC | 3 cut(s) | 32, 131, 173 |
| TseI | GCWGC | 3 cut(s) | 27, 268, 271 |
| Tsp45I | GTSAC | 3 cut(s) | 32, 131, 173 |
| XapI | RAATTY | 1 cut(s) | 79 |
| XmaJI | CCTAGG | 1 cut(s) | 22 |
| XspI | CTAG | 3 cut(s) | 23, 57, 207 |