ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 118 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 382 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcsI | RAATTY | 1 cut(s) | 47 |
| AfaI | GTAC | 1 cut(s) | 198 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 382 |
| AgsI | TTSAA | 4 cut(s) | 40, 47, 62, 364 |
| AluBI | AGCT | 2 cut(s) | 301, 347 |
| AluI | AGCT | 2 cut(s) | 301, 347 |
| AlwI | GGATC | 1 cut(s) | 71 |
| Ama87I | CYCGRG | 1 cut(s) | 87 |
| AoxI | GGCC | 1 cut(s) | 20 |
| ApeKI | GCWGC | 2 cut(s) | 205, 301 |
| ApoI | RAATTY | 1 cut(s) | 47 |
| AvaI | CYCGRG | 1 cut(s) | 87 |
| BaeGI | GKGCMC | 1 cut(s) | 123 |
| BanI | GGYRCC | 1 cut(s) | 118 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 356, 388 |
| BbsI | GAAGAC | 1 cut(s) | 290 |
| BbvI | GCAGC | 2 cut(s) | 217, 288 |
| BccI | CCATC | 1 cut(s) | 208 |
| BciVI | GTATCC | 1 cut(s) | 365 |
| BfaI | CTAG | 3 cut(s) | 167, 228, 233 |
| BfuI | GTATCC | 1 cut(s) | 365 |
| BisI | GCNGC | 2 cut(s) | 206, 302 |
| BlsI | GCNGC | 2 cut(s) | 207, 303 |
| BmeT110I | CYCGRG | 1 cut(s) | 87 |
| BmiI | GGNNCC | 2 cut(s) | 6, 120 |
| BpiI | GAAGAC | 1 cut(s) | 290 |
| Bpu10I | CCTNAGC | 1 cut(s) | 348 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 382 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 382 |
| BseRI | GAGGAG | 2 cut(s) | 335, 338 |
| BseSI | GKGCMC | 1 cut(s) | 123 |
| BseXI | GCAGC | 2 cut(s) | 217, 288 |
| BshFI | GGCC | 1 cut(s) | 22 |
| BshNI | GGYRCC | 1 cut(s) | 118 |
| BsiHKCI | CYCGRG | 1 cut(s) | 87 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 382 |
| BsmI | GAATGC | 1 cut(s) | 253 |
| BsnI | GGCC | 1 cut(s) | 22 |
| BsoBI | CYCGRG | 1 cut(s) | 87 |
| Bsp1286I | GDGCHC | 1 cut(s) | 123 |
| Bsp143I | GATC | 2 cut(s) | 76, 224 |
| BspANI | GGCC | 1 cut(s) | 22 |
| BspLI | GGNNCC | 2 cut(s) | 6, 120 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BspT107I | GGYRCC | 1 cut(s) | 118 |
| BssMI | GATC | 2 cut(s) | 76, 224 |
| Bst6I | CTCTTC | 2 cut(s) | 231, 270 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 310 |
| BstC8I | GCNNGC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 1 cut(s) | 348 |
| BstKTI | GATC | 2 cut(s) | 79, 227 |
| BstMBI | GATC | 2 cut(s) | 76, 224 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 310 |
| BstNSI | RCATGY | 1 cut(s) | 68 |
| BstSLI | GKGCMC | 1 cut(s) | 123 |
| BstV1I | GCAGC | 2 cut(s) | 217, 288 |
| BstV2I | GAAGAC | 1 cut(s) | 290 |
| BsuI | GTATCC | 1 cut(s) | 365 |
| BsuRI | GGCC | 1 cut(s) | 22 |
| Cac8I | GCNNGC | 1 cut(s) | 102 |
| Csp6I | GTAC | 1 cut(s) | 197 |
| CviAII | CATG | 4 cut(s) | 65, 124, 305, 382 |
| CviJI | RGCY | 7 cut(s) | 22, 58, 164, 232, 301, 329, 347 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 58, 164, 232, 301, 329, 347 |
| CviQI | GTAC | 1 cut(s) | 197 |
| DdeI | CTNAG | 1 cut(s) | 348 |
| DpnI | GATC | 2 cut(s) | 78, 226 |
| DpnII | GATC | 2 cut(s) | 76, 224 |
| Eam1104I | CTCTTC | 2 cut(s) | 231, 270 |
| EarI | CTCTTC | 2 cut(s) | 231, 270 |
| Eco147I | AGGCCT | 1 cut(s) | 22 |
| Eco88I | CYCGRG | 1 cut(s) | 87 |
| FaeI | CATG | 4 cut(s) | 68, 127, 308, 385 |
| FaiI | YATR | 8 cut(s) | 66, 125, 153, 161, 255, 306, 378, 383 |
| FatI | CATG | 4 cut(s) | 64, 123, 304, 381 |
| Fnu4HI | GCNGC | 2 cut(s) | 206, 302 |
| Fsp4HI | GCNGC | 2 cut(s) | 206, 302 |
| FspBI | CTAG | 3 cut(s) | 167, 228, 233 |
| GluI | GCNGC | 2 cut(s) | 206, 302 |
| HaeIII | GGCC | 1 cut(s) | 22 |
| Hin1II | CATG | 4 cut(s) | 68, 127, 308, 385 |
| HinfI | GANTC | 1 cut(s) | 286 |
| Hpy188I | TCNGA | 1 cut(s) | 319 |
| Hpy188III | TCNNGA | 2 cut(s) | 89, 167 |
| HpyAV | CCTTC | 1 cut(s) | 358 |
| HpyCH4V | TGCA | 1 cut(s) | 304 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 310 |
| HpyF3I | CTNAG | 1 cut(s) | 348 |
| Hsp92II | CATG | 4 cut(s) | 68, 127, 308, 385 |
| Kzo9I | GATC | 2 cut(s) | 76, 224 |
| LpnPI | CCDG | 4 cut(s) | 19, 86, 99, 257 |
| Lsp1109I | GCAGC | 2 cut(s) | 217, 288 |
| MaeI | CTAG | 3 cut(s) | 167, 228, 233 |
| MaeIII | GTNAC | 2 cut(s) | 133, 352 |
| MalI | GATC | 2 cut(s) | 78, 226 |
| MboI | GATC | 2 cut(s) | 76, 224 |
| MboII | GAAGA | 4 cut(s) | 248, 287, 292, 295 |
| MhlI | GDGCHC | 1 cut(s) | 123 |
| MluCI | AATT | 2 cut(s) | 47, 144 |
| MlyI | GAGTC | 1 cut(s) | 280 |
| MnlI | CCTC | 7 cut(s) | 33, 90, 256, 313, 316, 319, 361 |
| Mva1269I | GAATGC | 1 cut(s) | 253 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 310 |
| NdeII | GATC | 2 cut(s) | 76, 224 |
| NlaIII | CATG | 4 cut(s) | 68, 127, 308, 385 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 120 |
| NspI | RCATGY | 1 cut(s) | 68 |
| PaeR7I | CTCGAG | 1 cut(s) | 87 |
| PceI | AGGCCT | 1 cut(s) | 22 |
| PctI | GAATGC | 1 cut(s) | 253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 382 |
| PkrI | GCNGC | 2 cut(s) | 207, 303 |
| PleI | GAGTC | 1 cut(s) | 280 |
| PpsI | GAGTC | 1 cut(s) | 280 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 120 |
| RsaI | GTAC | 1 cut(s) | 198 |
| RsaNI | GTAC | 1 cut(s) | 197 |
| SatI | GCNGC | 2 cut(s) | 206, 302 |
| Sau3AI | GATC | 2 cut(s) | 76, 224 |
| SchI | GAGTC | 1 cut(s) | 280 |
| SduI | GDGCHC | 1 cut(s) | 123 |
| SetI | ASST | 5 cut(s) | 38, 267, 303, 349, 354 |
| Sfr274I | CTCGAG | 1 cut(s) | 87 |
| SlaI | CTCGAG | 1 cut(s) | 87 |
| SmlI | CTYRAG | 1 cut(s) | 87 |
| SmoI | CTYRAG | 1 cut(s) | 87 |
| Sse9I | AATT | 2 cut(s) | 47, 144 |
| SseBI | AGGCCT | 1 cut(s) | 22 |
| SspMI | CTAG | 3 cut(s) | 167, 228, 233 |
| StuI | AGGCCT | 1 cut(s) | 22 |
| TaqI | TCGA | 3 cut(s) | 25, 88, 223 |
| TasI | AATT | 2 cut(s) | 47, 144 |
| TseI | GCWGC | 2 cut(s) | 205, 301 |
| TspDTI | ATGAA | 1 cut(s) | 260 |
| TspGWI | ACGGA | 1 cut(s) | 308 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 382 |
| XapI | RAATTY | 1 cut(s) | 47 |
| XbaI | TCTAGA | 1 cut(s) | 166 |
| XceI | RCATGY | 1 cut(s) | 68 |
| XhoI | CTCGAG | 1 cut(s) | 87 |
| XspI | CTAG | 3 cut(s) | 167, 228, 233 |