Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 269 |
| AjnI | CCWGG | 2 cut(s) | 268, 317 |
| Alw26I | GTCTC | 1 cut(s) | 140 |
| AspS9I | GGNCC | 2 cut(s) | 272, 321 |
| AvaII | GGWCC | 2 cut(s) | 272, 321 |
| BanII | GRGCYC | 1 cut(s) | 236 |
| BceAI | ACGGC | 1 cut(s) | 155 |
| BciT130I | CCWGG | 2 cut(s) | 270, 319 |
| BclI | TGATCA | 1 cut(s) | 252 |
| BcoDI | GTCTC | 1 cut(s) | 140 |
| BfmI | CTRYAG | 2 cut(s) | 64, 143 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| Bme1390I | CCNGG | 2 cut(s) | 270, 319 |
| Bme18I | GGWCC | 2 cut(s) | 272, 321 |
| BmgT120I | GGNCC | 2 cut(s) | 272, 321 |
| BmiI | GGNNCC | 1 cut(s) | 233 |
| BmrFI | CCNGG | 2 cut(s) | 270, 319 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 269 |
| BseBI | CCWGG | 2 cut(s) | 270, 319 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 269 |
| BsiSI | CCGG | 3 cut(s) | 125, 139, 203 |
| BslFI | GGGAC | 1 cut(s) | 37 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 269 |
| BsmAI | GTCTC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 1 cut(s) | 236 |
| Bsp143I | GATC | 2 cut(s) | 226, 252 |
| BspLI | GGNNCC | 1 cut(s) | 233 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BssMI | GATC | 2 cut(s) | 226, 252 |
| Bst2UI | CCWGG | 2 cut(s) | 270, 319 |
| Bst6I | CTCTTC | 1 cut(s) | 170 |
| BstKTI | GATC | 2 cut(s) | 229, 255 |
| BstMAI | GTCTC | 1 cut(s) | 140 |
| BstMBI | GATC | 2 cut(s) | 226, 252 |
| BstNI | CCWGG | 2 cut(s) | 270, 319 |
| BstSCI | CCNGG | 2 cut(s) | 268, 317 |
| BstSFI | CTRYAG | 2 cut(s) | 64, 143 |
| BtsI | GCAGTG | 2 cut(s) | 12, 105 |
| BtsIMutI | CAGTG | 2 cut(s) | 12, 105 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cfr13I | GGNCC | 2 cut(s) | 272, 321 |
| CviAII | CATG | 3 cut(s) | 224, 250, 256 |
| CviJI | RGCY | 4 cut(s) | 63, 142, 209, 234 |
| CviKI_1 | RGCY | 4 cut(s) | 63, 142, 209, 234 |
| DpnI | GATC | 2 cut(s) | 228, 254 |
| DpnII | GATC | 2 cut(s) | 226, 252 |
| Eam1104I | CTCTTC | 1 cut(s) | 170 |
| EarI | CTCTTC | 1 cut(s) | 170 |
| Eco24I | GRGCYC | 1 cut(s) | 236 |
| Eco47I | GGWCC | 2 cut(s) | 272, 321 |
| EcoO109I | RGGNCCY | 2 cut(s) | 272, 321 |
| EcoRII | CCWGG | 2 cut(s) | 268, 317 |
| EcoT38I | GRGCYC | 1 cut(s) | 236 |
| FaeI | CATG | 3 cut(s) | 227, 253, 259 |
| FaiI | YATR | 3 cut(s) | 225, 251, 257 |
| FaqI | GGGAC | 1 cut(s) | 37 |
| FatI | CATG | 3 cut(s) | 223, 249, 255 |
| FbaI | TGATCA | 1 cut(s) | 252 |
| FriOI | GRGCYC | 1 cut(s) | 236 |
| HapII | CCGG | 3 cut(s) | 125, 139, 203 |
| Hin1II | CATG | 3 cut(s) | 227, 253, 259 |
| HinfI | GANTC | 3 cut(s) | 25, 56, 343 |
| HpaII | CCGG | 3 cut(s) | 125, 139, 203 |
| Hpy166II | GTNNAC | 3 cut(s) | 103, 215, 241 |
| Hpy188I | TCNGA | 2 cut(s) | 30, 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 336 |
| Hpy8I | GTNNAC | 3 cut(s) | 103, 215, 241 |
| HpyAV | CCTTC | 2 cut(s) | 285, 334 |
| HpyCH4V | TGCA | 1 cut(s) | 53 |
| Hsp92II | CATG | 3 cut(s) | 227, 253, 259 |
| Ksp22I | TGATCA | 1 cut(s) | 252 |
| Kzo9I | GATC | 2 cut(s) | 226, 252 |
| LmnI | GCTCC | 1 cut(s) | 231 |
| MalI | GATC | 2 cut(s) | 228, 254 |
| MboI | GATC | 2 cut(s) | 226, 252 |
| MboII | GAAGA | 1 cut(s) | 157 |
| MhlI | GDGCHC | 1 cut(s) | 236 |
| MluCI | AATT | 4 cut(s) | 18, 111, 264, 313 |
| MlyI | GAGTC | 2 cut(s) | 19, 352 |
| MnlI | CCTC | 7 cut(s) | 201, 228, 254, 270, 289, 317, 338 |
| MslI | CAYNNNNRTG | 1 cut(s) | 254 |
| MspI | CCGG | 3 cut(s) | 125, 139, 203 |
| MspR9I | CCNGG | 2 cut(s) | 270, 319 |
| MvaI | CCWGG | 2 cut(s) | 270, 319 |
| NdeII | GATC | 2 cut(s) | 226, 252 |
| NlaIII | CATG | 3 cut(s) | 227, 253, 259 |
| NlaIV | GGNNCC | 1 cut(s) | 233 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 300 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PflFI | GACNNNGTC | 1 cut(s) | 342 |
| PleI | GAGTC | 2 cut(s) | 19, 351 |
| PpsI | GAGTC | 2 cut(s) | 19, 351 |
| PpuMI | RGGWCCY | 2 cut(s) | 272, 321 |
| Psp5II | RGGWCCY | 2 cut(s) | 272, 321 |
| Psp6I | CCWGG | 2 cut(s) | 268, 317 |
| PspGI | CCWGG | 2 cut(s) | 268, 317 |
| PspN4I | GGNNCC | 1 cut(s) | 233 |
| PspPI | GGNCC | 2 cut(s) | 272, 321 |
| PspPPI | RGGWCCY | 2 cut(s) | 272, 321 |
| PsyI | GACNNNGTC | 1 cut(s) | 342 |
| RseI | CAYNNNNRTG | 1 cut(s) | 254 |
| Sau3AI | GATC | 2 cut(s) | 226, 252 |
| Sau96I | GGNCC | 2 cut(s) | 272, 321 |
| SchI | GAGTC | 2 cut(s) | 19, 352 |
| ScrFI | CCNGG | 2 cut(s) | 270, 319 |
| SduI | GDGCHC | 1 cut(s) | 236 |
| SetI | ASST | 5 cut(s) | 187, 220, 246, 274, 323 |
| SfcI | CTRYAG | 2 cut(s) | 64, 143 |
| SinI | GGWCC | 2 cut(s) | 272, 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 254 |
| Sse9I | AATT | 4 cut(s) | 18, 111, 264, 313 |
| StyD4I | CCNGG | 2 cut(s) | 268, 317 |
| TasI | AATT | 4 cut(s) | 18, 111, 264, 313 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| TscAI | CASTG | 2 cut(s) | 12, 105 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| TspRI | CASTG | 2 cut(s) | 12, 105 |
| Tth111I | GACNNNGTC | 1 cut(s) | 342 |
| VpaK11BI | GGWCC | 2 cut(s) | 272, 321 |