ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 421 |
| AfaI | GTAC | 1 cut(s) | 401 |
| AjnI | CCWGG | 1 cut(s) | 415 |
| AleI | CACNNNNGTG | 1 cut(s) | 207 |
| AluBI | AGCT | 2 cut(s) | 152, 349 |
| AluI | AGCT | 2 cut(s) | 152, 349 |
| Alw26I | GTCTC | 2 cut(s) | 66, 417 |
| Aor13HI | TCCGGA | 1 cut(s) | 421 |
| ApeKI | GCWGC | 1 cut(s) | 149 |
| AspS9I | GGNCC | 2 cut(s) | 376, 419 |
| AsuHPI | GGTGA | 2 cut(s) | 128, 344 |
| AvaII | GGWCC | 2 cut(s) | 376, 419 |
| BaeGI | GKGCMC | 2 cut(s) | 204, 358 |
| BbvI | GCAGC | 1 cut(s) | 161 |
| BccI | CCATC | 1 cut(s) | 4 |
| BciT130I | CCWGG | 1 cut(s) | 417 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcoDI | GTCTC | 2 cut(s) | 66, 417 |
| BisI | GCNGC | 1 cut(s) | 150 |
| BlsI | GCNGC | 1 cut(s) | 151 |
| Bme1390I | CCNGG | 1 cut(s) | 417 |
| Bme18I | GGWCC | 2 cut(s) | 376, 419 |
| BmgT120I | GGNCC | 2 cut(s) | 376, 419 |
| BmrFI | CCNGG | 1 cut(s) | 417 |
| BpuEI | CTTGAG | 1 cut(s) | 48 |
| BsaWI | WCCGGW | 2 cut(s) | 378, 421 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 397, 427 |
| Bse1I | ACTGG | 2 cut(s) | 209, 334 |
| BseAI | TCCGGA | 1 cut(s) | 421 |
| BseBI | CCWGG | 1 cut(s) | 417 |
| BseGI | GGATG | 2 cut(s) | 376, 430 |
| BseNI | ACTGG | 2 cut(s) | 209, 334 |
| BseSI | GKGCMC | 2 cut(s) | 204, 358 |
| BseXI | GCAGC | 1 cut(s) | 161 |
| BseYI | CCCAGC | 1 cut(s) | 178 |
| BsiSI | CCGG | 2 cut(s) | 379, 422 |
| BsmAI | GTCTC | 2 cut(s) | 66, 417 |
| Bsp1286I | GDGCHC | 2 cut(s) | 204, 358 |
| Bsp13I | TCCGGA | 1 cut(s) | 421 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspEI | TCCGGA | 1 cut(s) | 421 |
| BspHI | TCATGA | 1 cut(s) | 193 |
| BsrI | ACTGG | 2 cut(s) | 209, 334 |
| BssMI | GATC | 1 cut(s) | 190 |
| Bst2UI | CCWGG | 1 cut(s) | 417 |
| Bst4CI | ACNGT | 1 cut(s) | 224 |
| Bst6I | CTCTTC | 1 cut(s) | 63 |
| BstF5I | GGATG | 2 cut(s) | 376, 430 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMAI | GTCTC | 2 cut(s) | 66, 417 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstNI | CCWGG | 1 cut(s) | 417 |
| BstSCI | CCNGG | 1 cut(s) | 415 |
| BstSLI | GKGCMC | 2 cut(s) | 204, 358 |
| BstV1I | GCAGC | 1 cut(s) | 161 |
| BtsCI | GGATG | 2 cut(s) | 376, 430 |
| BtsIMutI | CAGTG | 1 cut(s) | 202 |
| CciI | TCATGA | 1 cut(s) | 193 |
| Cfr13I | GGNCC | 2 cut(s) | 376, 419 |
| Csp6I | GTAC | 1 cut(s) | 400 |
| CviAII | CATG | 2 cut(s) | 102, 194 |
| CviJI | RGCY | 4 cut(s) | 74, 152, 319, 349 |
| CviKI_1 | RGCY | 4 cut(s) | 74, 152, 319, 349 |
| CviQI | GTAC | 1 cut(s) | 400 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 1 cut(s) | 63 |
| Eco47I | GGWCC | 2 cut(s) | 376, 419 |
| EcoRII | CCWGG | 1 cut(s) | 415 |
| FaeI | CATG | 2 cut(s) | 105, 197 |
| FaiI | YATR | 7 cut(s) | 18, 103, 159, 195, 227, 247, 352 |
| FatI | CATG | 2 cut(s) | 101, 193 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 1 cut(s) | 150 |
| FokI | GGATG | 1 cut(s) | 383 |
| Fsp4HI | GCNGC | 1 cut(s) | 150 |
| GluI | GCNGC | 1 cut(s) | 150 |
| GsaI | CCCAGC | 1 cut(s) | 182 |
| HapII | CCGG | 2 cut(s) | 379, 422 |
| Hin1II | CATG | 2 cut(s) | 105, 197 |
| HinfI | GANTC | 3 cut(s) | 313, 340, 428 |
| HpaII | CCGG | 2 cut(s) | 379, 422 |
| HphI | GGTGA | 2 cut(s) | 128, 344 |
| Hpy166II | GTNNAC | 1 cut(s) | 264 |
| Hpy188I | TCNGA | 4 cut(s) | 144, 345, 367, 396 |
| Hpy188III | TCNNGA | 4 cut(s) | 65, 194, 422, 432 |
| Hpy8I | GTNNAC | 1 cut(s) | 264 |
| HpyAV | CCTTC | 2 cut(s) | 139, 191 |
| HpyCH4III | ACNGT | 1 cut(s) | 224 |
| HpyCH4V | TGCA | 2 cut(s) | 49, 109 |
| Hsp92II | CATG | 2 cut(s) | 105, 197 |
| Kpn2I | TCCGGA | 1 cut(s) | 421 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LpnPI | CCDG | 9 cut(s) | 59, 95, 114, 164, 190, 315, 392, 402, 429 |
| Lsp1109I | GCAGC | 1 cut(s) | 161 |
| MaeIII | GTNAC | 5 cut(s) | 97, 116, 238, 292, 325 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 2 cut(s) | 37, 80 |
| MhlI | GDGCHC | 2 cut(s) | 204, 358 |
| MluCI | AATT | 1 cut(s) | 172 |
| MnlI | CCTC | 6 cut(s) | 64, 106, 280, 301, 361, 367 |
| MroI | TCCGGA | 1 cut(s) | 421 |
| MslI | CAYNNNNRTG | 1 cut(s) | 207 |
| MspI | CCGG | 2 cut(s) | 379, 422 |
| MspR9I | CCNGG | 1 cut(s) | 417 |
| MvaI | CCWGG | 1 cut(s) | 417 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 2 cut(s) | 105, 197 |
| NmuCI | GTSAC | 2 cut(s) | 116, 325 |
| OliI | CACNNNNGTG | 1 cut(s) | 207 |
| PagI | TCATGA | 1 cut(s) | 193 |
| PfeI | GAWTC | 3 cut(s) | 313, 340, 428 |
| PkrI | GCNGC | 1 cut(s) | 151 |
| Psp6I | CCWGG | 1 cut(s) | 415 |
| PspFI | CCCAGC | 1 cut(s) | 178 |
| PspGI | CCWGG | 1 cut(s) | 415 |
| PspPI | GGNCC | 2 cut(s) | 376, 419 |
| RsaI | GTAC | 1 cut(s) | 401 |
| RsaNI | GTAC | 1 cut(s) | 400 |
| RseI | CAYNNNNRTG | 1 cut(s) | 207 |
| SatI | GCNGC | 1 cut(s) | 150 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| Sau96I | GGNCC | 2 cut(s) | 376, 419 |
| ScrFI | CCNGG | 1 cut(s) | 417 |
| SduI | GDGCHC | 2 cut(s) | 204, 358 |
| SetI | ASST | 3 cut(s) | 154, 351, 378 |
| SinI | GGWCC | 2 cut(s) | 376, 419 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 207 |
| SmlI | CTYRAG | 1 cut(s) | 63 |
| SmoI | CTYRAG | 1 cut(s) | 63 |
| Sse9I | AATT | 1 cut(s) | 172 |
| StyD4I | CCNGG | 1 cut(s) | 415 |
| TaaI | ACNGT | 1 cut(s) | 224 |
| TasI | AATT | 1 cut(s) | 172 |
| TfiI | GAWTC | 3 cut(s) | 313, 340, 428 |
| TscAI | CASTG | 1 cut(s) | 209 |
| TseFI | GTSAC | 2 cut(s) | 116, 325 |
| TseI | GCWGC | 1 cut(s) | 149 |
| Tsp45I | GTSAC | 2 cut(s) | 116, 325 |
| TspDTI | ATGAA | 3 cut(s) | 128, 210, 353 |
| TspRI | CASTG | 1 cut(s) | 209 |
| VpaK11BI | GGWCC | 2 cut(s) | 376, 419 |