ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 610 |
| AclWI | GGATC | 5 cut(s) | 120, 241, 846, 967, 1454 |
| AcsI | RAATTY | 4 cut(s) | 54, 214, 940, 1424 |
| AfaI | GTAC | 2 cut(s) | 565, 1291 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 24 |
| AjnI | CCWGG | 2 cut(s) | 259, 985 |
| AluBI | AGCT | 4 cut(s) | 63, 269, 995, 1528 |
| AluI | AGCT | 4 cut(s) | 63, 269, 995, 1528 |
| Alw21I | GWGCWC | 1 cut(s) | 760 |
| Alw26I | GTCTC | 3 cut(s) | 378, 1104, 1396 |
| AlwI | GGATC | 5 cut(s) | 120, 241, 846, 967, 1454 |
| ApoI | RAATTY | 4 cut(s) | 54, 214, 940, 1424 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 180, 906 |
| AspA2I | CCTAGG | 4 cut(s) | 202, 431, 928, 1157 |
| AspS9I | GGNCC | 2 cut(s) | 257, 983 |
| AsuHPI | GGTGA | 6 cut(s) | 112, 362, 723, 838, 1088, 1339 |
| AvaII | GGWCC | 2 cut(s) | 257, 983 |
| AvrII | CCTAGG | 4 cut(s) | 202, 431, 928, 1157 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 61, 94 |
| Bbv12I | GWGCWC | 1 cut(s) | 760 |
| BccI | CCATC | 8 cut(s) | 230, 416, 577, 793, 956, 1142, 1303, 1669 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 702, 736, 1718 |
| BciT130I | CCWGG | 2 cut(s) | 261, 987 |
| BclI | TGATCA | 3 cut(s) | 319, 1045, 1354 |
| BcoDI | GTCTC | 3 cut(s) | 378, 1104, 1396 |
| BlnI | CCTAGG | 4 cut(s) | 202, 431, 928, 1157 |
| Bme1390I | CCNGG | 2 cut(s) | 261, 987 |
| Bme18I | GGWCC | 2 cut(s) | 257, 983 |
| BmgT120I | GGNCC | 2 cut(s) | 257, 983 |
| BmiI | GGNNCC | 2 cut(s) | 258, 984 |
| BmrFI | CCNGG | 2 cut(s) | 261, 987 |
| BmsI | GCATC | 1 cut(s) | 1465 |
| BsaBI | GATNNNNATC | 3 cut(s) | 318, 803, 1044 |
| BsaI | GGTCTC | 1 cut(s) | 1396 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 24 |
| Bse1I | ACTGG | 1 cut(s) | 1632 |
| Bse3DI | GCAATG | 4 cut(s) | 91, 699, 744, 817 |
| Bse8I | GATNNNNATC | 3 cut(s) | 318, 803, 1044 |
| BseBI | CCWGG | 2 cut(s) | 261, 987 |
| BseGI | GGATG | 6 cut(s) | 538, 607, 622, 1264, 1447, 1480 |
| BseJI | GATNNNNATC | 3 cut(s) | 318, 803, 1044 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BseMI | GCAATG | 4 cut(s) | 91, 699, 744, 817 |
| BseMII | CTCAG | 1 cut(s) | 1479 |
| BseNI | ACTGG | 1 cut(s) | 1632 |
| BseRI | GAGGAG | 2 cut(s) | 1634, 1673 |
| BsgI | GTGCAG | 1 cut(s) | 1404 |
| BsiHKAI | GWGCWC | 1 cut(s) | 760 |
| BslFI | GGGAC | 3 cut(s) | 270, 996, 1346 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BsmAI | GTCTC | 3 cut(s) | 378, 1104, 1396 |
| BsmFI | GGGAC | 3 cut(s) | 270, 996, 1346 |
| BsmI | GAATGC | 2 cut(s) | 694, 748 |
| Bso31I | GGTCTC | 1 cut(s) | 1396 |
| Bsp1286I | GDGCHC | 1 cut(s) | 760 |
| Bsp19I | CCATGG | 2 cut(s) | 250, 976 |
| BspACI | CCGC | 1 cut(s) | 610 |
| BspCNI | CTCAG | 1 cut(s) | 1480 |
| BspLI | GGNNCC | 2 cut(s) | 258, 984 |
| BspPI | GGATC | 5 cut(s) | 120, 241, 846, 967, 1454 |
| BspTNI | GGTCTC | 1 cut(s) | 1396 |
| BsrDI | GCAATG | 4 cut(s) | 91, 699, 744, 817 |
| BsrI | ACTGG | 1 cut(s) | 1632 |
| BssT1I | CCWWGG | 9 cut(s) | 202, 250, 368, 431, 928, 976, 1094, 1157, 1268 |
| Bst2UI | CCWGG | 2 cut(s) | 261, 987 |
| Bst4CI | ACNGT | 7 cut(s) | 310, 336, 479, 1036, 1062, 1205, 1645 |
| Bst6I | CTCTTC | 1 cut(s) | 1700 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 743 |
| BstC8I | GCNNGC | 3 cut(s) | 271, 997, 1530 |
| BstDEI | CTNAG | 2 cut(s) | 59, 1488 |
| BstDSI | CCRYGG | 2 cut(s) | 250, 976 |
| BstF5I | GGATG | 6 cut(s) | 538, 607, 622, 1264, 1447, 1480 |
| BstMAI | GTCTC | 3 cut(s) | 378, 1104, 1396 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 743 |
| BstNI | CCWGG | 2 cut(s) | 261, 987 |
| BstNSI | RCATGY | 2 cut(s) | 197, 923 |
| BstSCI | CCNGG | 2 cut(s) | 259, 985 |
| BstX2I | RGATCY | 4 cut(s) | 112, 246, 838, 972 |
| BstYI | RGATCY | 4 cut(s) | 112, 246, 838, 972 |
| BtgI | CCRYGG | 2 cut(s) | 250, 976 |
| BtgZI | GCGATG | 2 cut(s) | 423, 1149 |
| BtsCI | GGATG | 6 cut(s) | 538, 607, 622, 1264, 1447, 1480 |
| BtsI | GCAGTG | 1 cut(s) | 666 |
| BtsIMutI | CAGTG | 2 cut(s) | 666, 1485 |
| Cac8I | GCNNGC | 3 cut(s) | 271, 997, 1530 |
| Cfr13I | GGNCC | 2 cut(s) | 257, 983 |
| Csp6I | GTAC | 2 cut(s) | 564, 1290 |
| CviQI | GTAC | 2 cut(s) | 564, 1290 |
| DdeI | CTNAG | 2 cut(s) | 59, 1488 |
| DraI | TTTAAA | 1 cut(s) | 1423 |
| Eam1104I | CTCTTC | 1 cut(s) | 1700 |
| EarI | CTCTTC | 1 cut(s) | 1700 |
| Eco130I | CCWWGG | 9 cut(s) | 202, 250, 368, 431, 928, 976, 1094, 1157, 1268 |
| Eco31I | GGTCTC | 1 cut(s) | 1396 |
| Eco32I | GATATC | 1 cut(s) | 1580 |
| Eco47I | GGWCC | 2 cut(s) | 257, 983 |
| EcoRI | GAATTC | 2 cut(s) | 214, 940 |
| EcoRII | CCWGG | 2 cut(s) | 259, 985 |
| EcoRV | GATATC | 1 cut(s) | 1580 |
| EcoT14I | CCWWGG | 9 cut(s) | 202, 250, 368, 431, 928, 976, 1094, 1157, 1268 |
| ErhI | CCWWGG | 9 cut(s) | 202, 250, 368, 431, 928, 976, 1094, 1157, 1268 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1555, 1587 |
| FaqI | GGGAC | 3 cut(s) | 270, 996, 1346 |
| FauI | CCCGC | 1 cut(s) | 603 |
| FbaI | TGATCA | 3 cut(s) | 319, 1045, 1354 |
| FokI | GGATG | 6 cut(s) | 525, 614, 629, 1251, 1434, 1487 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 8 cut(s) | 359, 697, 703, 1085, 1330, 1430, 1501, 1631 |
| HpaI | GTTAAC | 1 cut(s) | 6 |
| HphI | GGTGA | 6 cut(s) | 112, 362, 723, 838, 1088, 1339 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 666, 1494 |
| Hpy188I | TCNGA | 9 cut(s) | 19, 213, 383, 532, 590, 702, 939, 1258, 1354 |
| Hpy188III | TCNNGA | 7 cut(s) | 35, 317, 796, 1043, 1451, 1522, 1655 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 666, 1494 |
| HpyAV | CCTTC | 4 cut(s) | 103, 334, 829, 1060 |
| HpyCH4III | ACNGT | 7 cut(s) | 310, 336, 479, 1036, 1062, 1205, 1645 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 743 |
| HpyF3I | CTNAG | 2 cut(s) | 59, 1488 |
| Ksp22I | TGATCA | 3 cut(s) | 319, 1045, 1354 |
| KspAI | GTTAAC | 1 cut(s) | 6 |
| LmnI | GCTCC | 1 cut(s) | 763 |
| LweI | GCATC | 1 cut(s) | 1465 |
| MaeIII | GTNAC | 6 cut(s) | 363, 640, 1089, 1327, 1440, 1623 |
| MboII | GAAGA | 5 cut(s) | 188, 782, 914, 1675, 1717 |
| MfeI | CAATTG | 1 cut(s) | 1688 |
| MflI | RGATCY | 4 cut(s) | 112, 246, 838, 972 |
| MhlI | GDGCHC | 1 cut(s) | 760 |
| MlyI | GAGTC | 5 cut(s) | 353, 697, 1079, 1324, 1625 |
| MroXI | GAANNNNTTC | 2 cut(s) | 180, 906 |
| MseI | TTAA | 8 cut(s) | 5, 281, 390, 708, 1007, 1116, 1422, 1744 |
| MslI | CAYNNNNRTG | 2 cut(s) | 574, 1300 |
| MspR9I | CCNGG | 2 cut(s) | 261, 987 |
| MunI | CAATTG | 1 cut(s) | 1688 |
| Mva1269I | GAATGC | 2 cut(s) | 694, 748 |
| MvaI | CCWGG | 2 cut(s) | 261, 987 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 743 |
| NcoI | CCATGG | 2 cut(s) | 250, 976 |
| NlaIV | GGNNCC | 2 cut(s) | 258, 984 |
| NmuCI | GTSAC | 2 cut(s) | 640, 1327 |
| NspI | RCATGY | 2 cut(s) | 197, 923 |
| PctI | GAATGC | 2 cut(s) | 694, 748 |
| PdmI | GAANNNNTTC | 2 cut(s) | 180, 906 |
| PfeI | GAWTC | 3 cut(s) | 697, 1430, 1501 |
| PleI | GAGTC | 5 cut(s) | 353, 697, 1079, 1324, 1625 |
| PpsI | GAGTC | 5 cut(s) | 353, 697, 1079, 1324, 1625 |
| Psp6I | CCWGG | 2 cut(s) | 259, 985 |
| PspGI | CCWGG | 2 cut(s) | 259, 985 |
| PspN4I | GGNNCC | 2 cut(s) | 258, 984 |
| PspPI | GGNCC | 2 cut(s) | 257, 983 |
| PsuI | RGATCY | 4 cut(s) | 112, 246, 838, 972 |
| RsaI | GTAC | 2 cut(s) | 565, 1291 |
| RsaNI | GTAC | 2 cut(s) | 564, 1290 |
| RseI | CAYNNNNRTG | 2 cut(s) | 574, 1300 |
| SaqAI | TTAA | 8 cut(s) | 5, 281, 390, 708, 1007, 1116, 1422, 1744 |
| Sau96I | GGNCC | 2 cut(s) | 257, 983 |
| SchI | GAGTC | 5 cut(s) | 353, 697, 1079, 1324, 1625 |
| ScrFI | CCNGG | 2 cut(s) | 261, 987 |
| SduI | GDGCHC | 1 cut(s) | 760 |
| SfaNI | GCATC | 1 cut(s) | 1465 |
| SinI | GGWCC | 2 cut(s) | 257, 983 |
| SmiI | ATTTAAAT | 1 cut(s) | 1423 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 574, 1300 |
| SsiI | CCGC | 1 cut(s) | 610 |
| StyD4I | CCNGG | 2 cut(s) | 259, 985 |
| StyI | CCWWGG | 9 cut(s) | 202, 250, 368, 431, 928, 976, 1094, 1157, 1268 |
| SwaI | ATTTAAAT | 1 cut(s) | 1423 |
| TaaI | ACNGT | 7 cut(s) | 310, 336, 479, 1036, 1062, 1205, 1645 |
| TaqI | TCGA | 4 cut(s) | 36, 47, 304, 1030 |
| TatI | WGTACW | 2 cut(s) | 563, 1289 |
| TfiI | GAWTC | 3 cut(s) | 697, 1430, 1501 |
| Tru1I | TTAA | 8 cut(s) | 5, 281, 390, 708, 1007, 1116, 1422, 1744 |
| Tru9I | TTAA | 8 cut(s) | 5, 281, 390, 708, 1007, 1116, 1422, 1744 |
| TscAI | CASTG | 2 cut(s) | 673, 1492 |
| TseFI | GTSAC | 2 cut(s) | 640, 1327 |
| Tsp45I | GTSAC | 2 cut(s) | 640, 1327 |
| TspDTI | ATGAA | 5 cut(s) | 701, 710, 755, 789, 848 |
| TspRI | CASTG | 2 cut(s) | 673, 1492 |
| VpaK11BI | GGWCC | 2 cut(s) | 257, 983 |
| XapI | RAATTY | 4 cut(s) | 54, 214, 940, 1424 |
| XceI | RCATGY | 2 cut(s) | 197, 923 |
| XmaJI | CCTAGG | 4 cut(s) | 202, 431, 928, 1157 |
| XmnI | GAANNNNTTC | 2 cut(s) | 180, 906 |