ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 409 |
| AclWI | GGATC | 1 cut(s) | 456 |
| AcsI | RAATTY | 1 cut(s) | 79 |
| AcyI | GRCGYC | 1 cut(s) | 235 |
| AfaI | GTAC | 4 cut(s) | 189, 211, 313, 480 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AgsI | TTSAA | 1 cut(s) | 341 |
| AjiI | CACGTC | 1 cut(s) | 152 |
| AluBI | AGCT | 2 cut(s) | 206, 499 |
| AluI | AGCT | 2 cut(s) | 206, 499 |
| Alw26I | GTCTC | 1 cut(s) | 226 |
| AlwI | GGATC | 1 cut(s) | 456 |
| AoxI | GGCC | 1 cut(s) | 396 |
| ApeKI | GCWGC | 1 cut(s) | 496 |
| ApoI | RAATTY | 1 cut(s) | 79 |
| AspS9I | GGNCC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 1 cut(s) | 321 |
| AvaII | GGWCC | 1 cut(s) | 59 |
| BbvI | GCAGC | 1 cut(s) | 508 |
| BccI | CCATC | 1 cut(s) | 281 |
| BcoDI | GTCTC | 1 cut(s) | 226 |
| BfaI | CTAG | 5 cut(s) | 47, 171, 207, 324, 443 |
| BisI | GCNGC | 1 cut(s) | 497 |
| BlsI | GCNGC | 1 cut(s) | 498 |
| Bme18I | GGWCC | 1 cut(s) | 59 |
| BmgBI | CACGTC | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 59 |
| BmiI | GGNNCC | 1 cut(s) | 61 |
| BmsI | GCATC | 3 cut(s) | 7, 169, 292 |
| BsaAI | YACGTR | 1 cut(s) | 72 |
| BsaHI | GRCGYC | 1 cut(s) | 235 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| Bse1I | ACTGG | 1 cut(s) | 381 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseMII | CTCAG | 2 cut(s) | 69, 521 |
| BseNI | ACTGG | 1 cut(s) | 381 |
| BseXI | GCAGC | 1 cut(s) | 508 |
| BsgI | GTGCAG | 1 cut(s) | 100 |
| BshFI | GGCC | 1 cut(s) | 398 |
| BslFI | GGGAC | 1 cut(s) | 446 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsmAI | GTCTC | 1 cut(s) | 226 |
| BsmBI | CGTCTC | 1 cut(s) | 226 |
| BsmFI | GGGAC | 1 cut(s) | 446 |
| BsnI | GGCC | 1 cut(s) | 398 |
| Bsp1407I | TGTACA | 1 cut(s) | 478 |
| Bsp143I | GATC | 2 cut(s) | 43, 448 |
| BspANI | GGCC | 1 cut(s) | 398 |
| BspCNI | CTCAG | 2 cut(s) | 68, 520 |
| BspLI | GGNNCC | 1 cut(s) | 61 |
| BspPI | GGATC | 1 cut(s) | 456 |
| BsrGI | TGTACA | 1 cut(s) | 478 |
| BsrI | ACTGG | 1 cut(s) | 381 |
| BssMI | GATC | 2 cut(s) | 43, 448 |
| BssNI | GRCGYC | 1 cut(s) | 235 |
| Bst6I | CTCTTC | 3 cut(s) | 224, 525, 528 |
| BstACI | GRCGYC | 1 cut(s) | 235 |
| BstAUI | TGTACA | 1 cut(s) | 478 |
| BstBAI | YACGTR | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 1 cut(s) | 396 |
| BstDEI | CTNAG | 3 cut(s) | 55, 95, 507 |
| BstKTI | GATC | 2 cut(s) | 46, 451 |
| BstMAI | GTCTC | 1 cut(s) | 226 |
| BstMBI | GATC | 2 cut(s) | 43, 448 |
| BstV1I | GCAGC | 1 cut(s) | 508 |
| BstX2I | RGATCY | 1 cut(s) | 448 |
| BstYI | RGATCY | 1 cut(s) | 448 |
| BsuRI | GGCC | 1 cut(s) | 398 |
| BtrI | CACGTC | 1 cut(s) | 152 |
| BtsIMutI | CAGTG | 1 cut(s) | 90 |
| Cac8I | GCNNGC | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 1 cut(s) | 59 |
| CseI | GACGC | 1 cut(s) | 243 |
| Csp6I | GTAC | 4 cut(s) | 188, 210, 312, 479 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 53, 88 |
| CviAII | CATG | 2 cut(s) | 146, 185 |
| CviJI | RGCY | 4 cut(s) | 206, 260, 398, 499 |
| CviKI_1 | RGCY | 4 cut(s) | 206, 260, 398, 499 |
| CviQI | GTAC | 4 cut(s) | 188, 210, 312, 479 |
| DdeI | CTNAG | 3 cut(s) | 55, 95, 507 |
| DpnI | GATC | 2 cut(s) | 45, 450 |
| DpnII | GATC | 2 cut(s) | 43, 448 |
| DraI | TTTAAA | 1 cut(s) | 403 |
| Eam1104I | CTCTTC | 3 cut(s) | 224, 525, 528 |
| EarI | CTCTTC | 3 cut(s) | 224, 525, 528 |
| Eco147I | AGGCCT | 1 cut(s) | 398 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| Eco47I | GGWCC | 1 cut(s) | 59 |
| EcoO109I | RGGNCCY | 1 cut(s) | 59 |
| EcoRI | GAATTC | 1 cut(s) | 79 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| Esp3I | CGTCTC | 1 cut(s) | 226 |
| FaeI | CATG | 2 cut(s) | 149, 188 |
| FaiI | YATR | 2 cut(s) | 147, 186 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 383, 415 |
| FaqI | GGGAC | 1 cut(s) | 446 |
| FatI | CATG | 2 cut(s) | 145, 184 |
| FblI | GTMKAC | 1 cut(s) | 409 |
| Fnu4HI | GCNGC | 1 cut(s) | 497 |
| Fsp4HI | GCNGC | 1 cut(s) | 497 |
| FspBI | CTAG | 5 cut(s) | 47, 171, 207, 324, 443 |
| GluI | GCNGC | 1 cut(s) | 497 |
| HaeIII | GGCC | 1 cut(s) | 398 |
| HgaI | GACGC | 1 cut(s) | 243 |
| Hin1I | GRCGYC | 1 cut(s) | 235 |
| Hin1II | CATG | 2 cut(s) | 149, 188 |
| HinfI | GANTC | 2 cut(s) | 176, 505 |
| HphI | GGTGA | 1 cut(s) | 321 |
| Hpy166II | GTNNAC | 3 cut(s) | 312, 329, 410 |
| Hpy188I | TCNGA | 1 cut(s) | 472 |
| Hpy188III | TCNNGA | 3 cut(s) | 14, 41, 57 |
| Hpy8I | GTNNAC | 3 cut(s) | 312, 329, 410 |
| HpyAV | CCTTC | 2 cut(s) | 47, 132 |
| HpyCH4IV | ACGT | 2 cut(s) | 71, 151 |
| HpyCH4V | TGCA | 5 cut(s) | 20, 117, 149, 160, 274 |
| HpyF3I | CTNAG | 3 cut(s) | 55, 95, 507 |
| HpySE526I | ACGT | 2 cut(s) | 71, 151 |
| Hsp92I | GRCGYC | 1 cut(s) | 235 |
| Hsp92II | CATG | 2 cut(s) | 149, 188 |
| Kzo9I | GATC | 2 cut(s) | 43, 448 |
| LpnPI | CCDG | 5 cut(s) | 42, 362, 380, 470, 515 |
| Lsp1109I | GCAGC | 1 cut(s) | 508 |
| LweI | GCATC | 3 cut(s) | 7, 169, 292 |
| MaeI | CTAG | 5 cut(s) | 47, 171, 207, 324, 443 |
| MaeII | ACGT | 2 cut(s) | 71, 151 |
| MaeIII | GTNAC | 3 cut(s) | 26, 85, 510 |
| MalI | GATC | 2 cut(s) | 45, 450 |
| MboI | GATC | 2 cut(s) | 43, 448 |
| MboII | GAAGA | 5 cut(s) | 241, 364, 502, 512, 545 |
| MflI | RGATCY | 1 cut(s) | 448 |
| MluCI | AATT | 3 cut(s) | 79, 245, 275 |
| MlyI | GAGTC | 1 cut(s) | 499 |
| MmeI | TCCRAC | 2 cut(s) | 81, 351 |
| MnlI | CCTC | 2 cut(s) | 250, 439 |
| MseI | TTAA | 2 cut(s) | 249, 402 |
| NdeII | GATC | 2 cut(s) | 43, 448 |
| NlaIII | CATG | 2 cut(s) | 149, 188 |
| NlaIV | GGNNCC | 1 cut(s) | 61 |
| NmuCI | GTSAC | 1 cut(s) | 85 |
| PceI | AGGCCT | 1 cut(s) | 398 |
| PfeI | GAWTC | 1 cut(s) | 176 |
| PkrI | GCNGC | 1 cut(s) | 498 |
| PleI | GAGTC | 1 cut(s) | 499 |
| PpsI | GAGTC | 1 cut(s) | 499 |
| Ppu21I | YACGTR | 1 cut(s) | 72 |
| PpuMI | RGGWCCY | 1 cut(s) | 59 |
| Psp5II | RGGWCCY | 1 cut(s) | 59 |
| PspN4I | GGNNCC | 1 cut(s) | 61 |
| PspPI | GGNCC | 1 cut(s) | 59 |
| PspPPI | RGGWCCY | 1 cut(s) | 59 |
| PsuI | RGATCY | 1 cut(s) | 448 |
| RsaI | GTAC | 4 cut(s) | 189, 211, 313, 480 |
| RsaNI | GTAC | 4 cut(s) | 188, 210, 312, 479 |
| SaqAI | TTAA | 2 cut(s) | 249, 402 |
| SatI | GCNGC | 1 cut(s) | 497 |
| Sau3AI | GATC | 2 cut(s) | 43, 448 |
| Sau96I | GGNCC | 1 cut(s) | 59 |
| SchI | GAGTC | 1 cut(s) | 499 |
| SfaNI | GCATC | 3 cut(s) | 7, 169, 292 |
| SinI | GGWCC | 1 cut(s) | 59 |
| Sse9I | AATT | 3 cut(s) | 79, 245, 275 |
| SseBI | AGGCCT | 1 cut(s) | 398 |
| SspI | AATATT | 1 cut(s) | 319 |
| SspMI | CTAG | 5 cut(s) | 47, 171, 207, 324, 443 |
| StuI | AGGCCT | 1 cut(s) | 398 |
| TaiI | ACGT | 2 cut(s) | 74, 154 |
| TaqI | TCGA | 1 cut(s) | 361 |
| TasI | AATT | 3 cut(s) | 79, 245, 275 |
| TatI | WGTACW | 3 cut(s) | 209, 311, 478 |
| TfiI | GAWTC | 1 cut(s) | 176 |
| Tru1I | TTAA | 2 cut(s) | 249, 402 |
| Tru9I | TTAA | 2 cut(s) | 249, 402 |
| TscAI | CASTG | 1 cut(s) | 90 |
| TseFI | GTSAC | 1 cut(s) | 85 |
| TseI | GCWGC | 1 cut(s) | 496 |
| Tsp45I | GTSAC | 1 cut(s) | 85 |
| TspRI | CASTG | 1 cut(s) | 90 |
| VpaK11BI | GGWCC | 1 cut(s) | 59 |
| XapI | RAATTY | 1 cut(s) | 79 |
| XmiI | GTMKAC | 1 cut(s) | 409 |
| XspI | CTAG | 5 cut(s) | 47, 171, 207, 324, 443 |