ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 29 |
| AgsI | TTSAA | 3 cut(s) | 133, 334, 341 |
| Alw26I | GTCTC | 1 cut(s) | 316 |
| AoxI | GGCC | 1 cut(s) | 314 |
| AspA2I | CCTAGG | 2 cut(s) | 223, 317 |
| AsuHPI | GGTGA | 1 cut(s) | 125 |
| AvrII | CCTAGG | 2 cut(s) | 223, 317 |
| BciVI | GTATCC | 1 cut(s) | 82 |
| BclI | TGATCA | 1 cut(s) | 49 |
| BcoDI | GTCTC | 1 cut(s) | 316 |
| BfaI | CTAG | 4 cut(s) | 33, 224, 255, 318 |
| BfuI | GTATCC | 1 cut(s) | 82 |
| BglII | AGATCT | 2 cut(s) | 73, 126 |
| BlnI | CCTAGG | 2 cut(s) | 223, 317 |
| BmsI | GCATC | 2 cut(s) | 184, 253 |
| BsaJI | CCNNGG | 3 cut(s) | 98, 223, 317 |
| Bse1I | ACTGG | 1 cut(s) | 19 |
| BseDI | CCNNGG | 3 cut(s) | 98, 223, 317 |
| BseGI | GGATG | 1 cut(s) | 199 |
| BseMII | CTCAG | 1 cut(s) | 255 |
| BseNI | ACTGG | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 316 |
| BsmAI | GTCTC | 1 cut(s) | 316 |
| BsnI | GGCC | 1 cut(s) | 316 |
| Bsp143I | GATC | 3 cut(s) | 49, 73, 126 |
| BspANI | GGCC | 1 cut(s) | 316 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 19 |
| BssECI | CCNNGG | 3 cut(s) | 98, 223, 317 |
| BssMI | GATC | 3 cut(s) | 49, 73, 126 |
| BssT1I | CCWWGG | 3 cut(s) | 98, 223, 317 |
| BstC8I | GCNNGC | 2 cut(s) | 288, 292 |
| BstDEI | CTNAG | 3 cut(s) | 234, 264, 309 |
| BstF5I | GGATG | 1 cut(s) | 199 |
| BstKTI | GATC | 3 cut(s) | 52, 76, 129 |
| BstMAI | GTCTC | 1 cut(s) | 316 |
| BstMBI | GATC | 3 cut(s) | 49, 73, 126 |
| BstX2I | RGATCY | 2 cut(s) | 73, 126 |
| BstYI | RGATCY | 2 cut(s) | 73, 126 |
| BsuI | GTATCC | 1 cut(s) | 82 |
| BsuRI | GGCC | 1 cut(s) | 316 |
| BtsCI | GGATG | 1 cut(s) | 199 |
| Cac8I | GCNNGC | 2 cut(s) | 288, 292 |
| CseI | GACGC | 1 cut(s) | 152 |
| Csp6I | GTAC | 1 cut(s) | 28 |
| CviAII | CATG | 2 cut(s) | 57, 85 |
| CviJI | RGCY | 2 cut(s) | 290, 316 |
| CviKI_1 | RGCY | 2 cut(s) | 290, 316 |
| CviQI | GTAC | 1 cut(s) | 28 |
| DdeI | CTNAG | 3 cut(s) | 234, 264, 309 |
| DpnI | GATC | 3 cut(s) | 51, 75, 128 |
| DpnII | GATC | 3 cut(s) | 49, 73, 126 |
| Eco130I | CCWWGG | 3 cut(s) | 98, 223, 317 |
| EcoT14I | CCWWGG | 3 cut(s) | 98, 223, 317 |
| ErhI | CCWWGG | 3 cut(s) | 98, 223, 317 |
| FaeI | CATG | 2 cut(s) | 60, 88 |
| FaiI | YATR | 7 cut(s) | 24, 58, 86, 207, 270, 299, 327 |
| FatI | CATG | 2 cut(s) | 56, 84 |
| FbaI | TGATCA | 1 cut(s) | 49 |
| FokI | GGATG | 1 cut(s) | 206 |
| FspBI | CTAG | 4 cut(s) | 33, 224, 255, 318 |
| HaeIII | GGCC | 1 cut(s) | 316 |
| HgaI | GACGC | 1 cut(s) | 152 |
| Hin1II | CATG | 2 cut(s) | 60, 88 |
| HinfI | GANTC | 4 cut(s) | 186, 260, 330, 341 |
| HphI | GGTGA | 1 cut(s) | 125 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 1 cut(s) | 265 |
| Hpy188III | TCNNGA | 2 cut(s) | 130, 167 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyCH4IV | ACGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 1 cut(s) | 286 |
| HpyF3I | CTNAG | 3 cut(s) | 234, 264, 309 |
| HpySE526I | ACGT | 1 cut(s) | 46 |
| Hsp92II | CATG | 2 cut(s) | 60, 88 |
| Ksp22I | TGATCA | 1 cut(s) | 49 |
| Kzo9I | GATC | 3 cut(s) | 49, 73, 126 |
| LmnI | GCTCC | 1 cut(s) | 256 |
| LpnPI | CCDG | 4 cut(s) | 175, 180, 227, 304 |
| LweI | GCATC | 2 cut(s) | 184, 253 |
| MaeI | CTAG | 4 cut(s) | 33, 224, 255, 318 |
| MaeII | ACGT | 1 cut(s) | 46 |
| MaeIII | GTNAC | 3 cut(s) | 80, 113, 209 |
| MalI | GATC | 3 cut(s) | 51, 75, 128 |
| MboI | GATC | 3 cut(s) | 49, 73, 126 |
| MfeI | CAATTG | 1 cut(s) | 276 |
| MflI | RGATCY | 2 cut(s) | 73, 126 |
| MluCI | AATT | 1 cut(s) | 276 |
| MnlI | CCTC | 2 cut(s) | 174, 312 |
| MseI | TTAA | 1 cut(s) | 120 |
| MunI | CAATTG | 1 cut(s) | 276 |
| NdeII | GATC | 3 cut(s) | 49, 73, 126 |
| NlaIII | CATG | 2 cut(s) | 60, 88 |
| NmuCI | GTSAC | 3 cut(s) | 80, 113, 209 |
| PfeI | GAWTC | 4 cut(s) | 186, 260, 330, 341 |
| PsuI | RGATCY | 2 cut(s) | 73, 126 |
| RsaI | GTAC | 1 cut(s) | 29 |
| RsaNI | GTAC | 1 cut(s) | 28 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| Sau3AI | GATC | 3 cut(s) | 49, 73, 126 |
| SetI | ASST | 6 cut(s) | 49, 216, 225, 240, 304, 310 |
| SfaNI | GCATC | 2 cut(s) | 184, 253 |
| Sse9I | AATT | 1 cut(s) | 276 |
| SspMI | CTAG | 4 cut(s) | 33, 224, 255, 318 |
| StyI | CCWWGG | 3 cut(s) | 98, 223, 317 |
| TaiI | ACGT | 1 cut(s) | 49 |
| TasI | AATT | 1 cut(s) | 276 |
| TfiI | GAWTC | 4 cut(s) | 186, 260, 330, 341 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TseFI | GTSAC | 3 cut(s) | 80, 113, 209 |
| Tsp45I | GTSAC | 3 cut(s) | 80, 113, 209 |
| XmaJI | CCTAGG | 2 cut(s) | 223, 317 |
| XspI | CTAG | 4 cut(s) | 33, 224, 255, 318 |