ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 169 |
| AciI | CCGC | 2 cut(s) | 44, 241 |
| AcoI | YGGCCR | 1 cut(s) | 196 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 19, 316 |
| AgsI | TTSAA | 2 cut(s) | 292, 304 |
| AhlI | ACTAGT | 1 cut(s) | 185 |
| AjiI | CACGTC | 1 cut(s) | 139 |
| AluBI | AGCT | 1 cut(s) | 298 |
| AluI | AGCT | 1 cut(s) | 298 |
| AoxI | GGCC | 1 cut(s) | 196 |
| AspLEI | GCGC | 1 cut(s) | 219 |
| AsuHPI | GGTGA | 1 cut(s) | 296 |
| AsuII | TTCGAA | 1 cut(s) | 116 |
| BalI | TGGCCA | 1 cut(s) | 198 |
| BccI | CCATC | 1 cut(s) | 207 |
| BcuI | ACTAGT | 1 cut(s) | 185 |
| BfaI | CTAG | 1 cut(s) | 186 |
| BfoI | RGCGCY | 1 cut(s) | 220 |
| BmgBI | CACGTC | 1 cut(s) | 139 |
| BpmI | CTGGAG | 1 cut(s) | 38 |
| Bpu14I | TTCGAA | 1 cut(s) | 116 |
| BsaJI | CCNNGG | 1 cut(s) | 269 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 248, 278 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 19, 316 |
| BseDI | CCNNGG | 1 cut(s) | 269 |
| BseGI | GGATG | 3 cut(s) | 33, 106, 199 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 19, 316 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseRI | GAGGAG | 1 cut(s) | 269 |
| BsgI | GTGCAG | 1 cut(s) | 281 |
| BshFI | GGCC | 1 cut(s) | 198 |
| BslFI | GGGAC | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 19, 316 |
| BsmFI | GGGAC | 1 cut(s) | 104 |
| BsmI | GAATGC | 1 cut(s) | 310 |
| BsnI | GGCC | 1 cut(s) | 198 |
| Bsp119I | TTCGAA | 1 cut(s) | 116 |
| BspACI | CCGC | 2 cut(s) | 44, 241 |
| BspANI | GGCC | 1 cut(s) | 198 |
| BspCNI | CTCAG | 1 cut(s) | 65 |
| BspHI | TCATGA | 1 cut(s) | 148 |
| BspT104I | TTCGAA | 1 cut(s) | 116 |
| BssECI | CCNNGG | 1 cut(s) | 269 |
| BssNAI | GTATAC | 1 cut(s) | 170 |
| Bst1107I | GTATAC | 1 cut(s) | 170 |
| Bst4CI | ACNGT | 6 cut(s) | 38, 174, 211, 224, 237, 270 |
| BstBI | TTCGAA | 1 cut(s) | 116 |
| BstDEI | CTNAG | 1 cut(s) | 52 |
| BstDSI | CCRYGG | 1 cut(s) | 269 |
| BstF5I | GGATG | 3 cut(s) | 33, 106, 199 |
| BstH2I | RGCGCY | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 219 |
| BstZ17I | GTATAC | 1 cut(s) | 170 |
| BsuRI | GGCC | 1 cut(s) | 198 |
| BtgI | CCRYGG | 1 cut(s) | 269 |
| BtrI | CACGTC | 1 cut(s) | 139 |
| BtsCI | GGATG | 3 cut(s) | 33, 106, 199 |
| BtsIMutI | CAGTG | 1 cut(s) | 233 |
| CciI | TCATGA | 1 cut(s) | 148 |
| CfoI | GCGC | 1 cut(s) | 219 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 193, 209, 228, 244 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 5 cut(s) | 77, 97, 181, 198, 298 |
| CviKI_1 | RGCY | 5 cut(s) | 77, 97, 181, 198, 298 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 1 cut(s) | 52 |
| EaeI | YGGCCR | 1 cut(s) | 196 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 4 cut(s) | 132, 150, 170, 195 |
| FaqI | GGGAC | 1 cut(s) | 104 |
| FatI | CATG | 1 cut(s) | 148 |
| FauI | CCCGC | 1 cut(s) | 234 |
| FblI | GTMKAC | 1 cut(s) | 169 |
| FokI | GGATG | 3 cut(s) | 40, 113, 186 |
| FspBI | CTAG | 1 cut(s) | 186 |
| GlaI | GCGC | 1 cut(s) | 218 |
| GsuI | CTGGAG | 1 cut(s) | 38 |
| HaeII | RGCGCY | 1 cut(s) | 220 |
| HaeIII | GGCC | 1 cut(s) | 198 |
| HhaI | GCGC | 1 cut(s) | 219 |
| Hin1II | CATG | 1 cut(s) | 152 |
| Hin6I | GCGC | 1 cut(s) | 217 |
| HinP1I | GCGC | 1 cut(s) | 217 |
| HphI | GGTGA | 1 cut(s) | 296 |
| Hpy166II | GTNNAC | 1 cut(s) | 170 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 149 |
| Hpy8I | GTNNAC | 1 cut(s) | 170 |
| Hpy99I | CGWCG | 1 cut(s) | 140 |
| HpyAV | CCTTC | 2 cut(s) | 310, 314 |
| HpyCH4III | ACNGT | 6 cut(s) | 38, 174, 211, 224, 237, 270 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 1 cut(s) | 262 |
| HpyF3I | CTNAG | 1 cut(s) | 52 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| HspAI | GCGC | 1 cut(s) | 217 |
| LpnPI | CCDG | 3 cut(s) | 2, 83, 150 |
| MaeI | CTAG | 1 cut(s) | 186 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MaeIII | GTNAC | 2 cut(s) | 231, 264 |
| MboII | GAAGA | 1 cut(s) | 114 |
| MlsI | TGGCCA | 1 cut(s) | 198 |
| MluCI | AATT | 1 cut(s) | 245 |
| MluNI | TGGCCA | 1 cut(s) | 198 |
| MnlI | CCTC | 8 cut(s) | 13, 34, 81, 136, 171, 247, 250, 317 |
| Mox20I | TGGCCA | 1 cut(s) | 198 |
| MscI | TGGCCA | 1 cut(s) | 198 |
| MseI | TTAA | 1 cut(s) | 328 |
| Msp20I | TGGCCA | 1 cut(s) | 198 |
| Mva1269I | GAATGC | 1 cut(s) | 310 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NmuCI | GTSAC | 1 cut(s) | 231 |
| NspV | TTCGAA | 1 cut(s) | 116 |
| PagI | TCATGA | 1 cut(s) | 148 |
| PctI | GAATGC | 1 cut(s) | 310 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| SaqAI | TTAA | 1 cut(s) | 328 |
| SetI | ASST | 6 cut(s) | 24, 141, 147, 261, 300, 328 |
| SfuI | TTCGAA | 1 cut(s) | 116 |
| SpeI | ACTAGT | 1 cut(s) | 185 |
| Sse9I | AATT | 1 cut(s) | 245 |
| SsiI | CCGC | 2 cut(s) | 44, 241 |
| SspMI | CTAG | 1 cut(s) | 186 |
| TaaI | ACNGT | 6 cut(s) | 38, 174, 211, 224, 237, 270 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TaqI | TCGA | 2 cut(s) | 116, 135 |
| TasI | AATT | 1 cut(s) | 245 |
| Tru1I | TTAA | 1 cut(s) | 328 |
| Tru9I | TTAA | 1 cut(s) | 328 |
| TscAI | CASTG | 1 cut(s) | 240 |
| TseFI | GTSAC | 1 cut(s) | 231 |
| Tsp45I | GTSAC | 1 cut(s) | 231 |
| TspDTI | ATGAA | 4 cut(s) | 17, 47, 137, 165 |
| TspRI | CASTG | 1 cut(s) | 240 |
| XmiI | GTMKAC | 1 cut(s) | 169 |
| XspI | CTAG | 1 cut(s) | 186 |