Core-2/I-Branching enzyme
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 188 | 7.9e-53 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 2e-14 | TIR domain |
| NB-ARC | PF00931 | 212 - 366 | 2.3e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 435 - 503 | 6.1e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 670 - 767 | 3.1e-13 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 694 - 779 | 1.2e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 747 - 863 | 2.1e-13 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 766 - 850 | 1.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 832 - 916 | 4.2e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 836 - 922 | 7.2e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 910 - 965 | 2.7e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 922 - 1098 | 3.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 992 - 1069 | 3.4e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 1003 - 1058 | 1.3e-06 | Leucine rich repeat |
| C-JID | PF20160 | 1139 - 1280 | 5.4e-20 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 863, 1142 |
| AarI | CACCTGC | 1 cut(s) | 1518 |
| AatII | GACGTC | 2 cut(s) | 642, 1560 |
| Acc36I | ACCTGC | 3 cut(s) | 1518, 1716, 1955 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3454, 3629 |
| AccBSI | CCGCTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 1 cut(s) | 778 |
| AciI | CCGC | 5 cut(s) | 643, 669, 698, 1501, 3174 |
| AclWI | GGATC | 5 cut(s) | 152, 338, 1292, 1299, 1422 |
| AcoI | YGGCCR | 1 cut(s) | 3252 |
| AcsI | RAATTY | 7 cut(s) | 288, 481, 585, 722, 1260, 1873, 3426 |
| AcuI | CTGAAG | 5 cut(s) | 477, 1052, 1128, 1323, 1611 |
| AcyI | GRCGYC | 2 cut(s) | 639, 1557 |
| AfaI | GTAC | 7 cut(s) | 357, 1179, 1972, 2073, 2379, 2592, 3440 |
| AfeI | AGCGCT | 1 cut(s) | 3223 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1714, 3454, 3629, 3689 |
| AflII | CTTAAG | 2 cut(s) | 782, 3368 |
| AflIII | ACRYGT | 1 cut(s) | 1564 |
| AjnI | CCWGG | 3 cut(s) | 1503, 1993, 3484 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 564, 596, 1104, 1136 |
| AleI | CACNNNNGTG | 1 cut(s) | 3450 |
| Alw21I | GWGCWC | 1 cut(s) | 1228 |
| Alw26I | GTCTC | 2 cut(s) | 939, 1830 |
| Alw44I | GTGCAC | 1 cut(s) | 1224 |
| AlwI | GGATC | 5 cut(s) | 152, 338, 1292, 1299, 1422 |
| Ama87I | CYCGRG | 1 cut(s) | 3122 |
| Aor51HI | AGCGCT | 1 cut(s) | 3223 |
| AoxI | GGCC | 7 cut(s) | 825, 2359, 2572, 2716, 3133, 3252, 3591 |
| ApaLI | GTGCAC | 1 cut(s) | 1224 |
| ApeKI | GCWGC | 5 cut(s) | 203, 322, 601, 2900, 3478 |
| ApoI | RAATTY | 7 cut(s) | 288, 481, 585, 722, 1260, 1873, 3426 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 629, 661, 2944, 2976 |
| AseI | ATTAAT | 2 cut(s) | 1887, 3882 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 2229 |
| AspLEI | GCGC | 3 cut(s) | 3224, 3682, 3983 |
| AspS9I | GGNCC | 7 cut(s) | 2359, 2572, 3133, 3570, 3591, 3620, 3811 |
| AsuC2I | CCSGG | 3 cut(s) | 1524, 3417, 3753 |
| AsuHPI | GGTGA | 4 cut(s) | 890, 2898, 3380, 3437 |
| AsuII | TTCGAA | 1 cut(s) | 1849 |
| AvaI | CYCGRG | 1 cut(s) | 3122 |
| AvaII | GGWCC | 3 cut(s) | 3570, 3620, 3811 |
| AxyI | CCTNAGG | 1 cut(s) | 1713 |
| BaeGI | GKGCMC | 1 cut(s) | 1228 |
| BalI | TGGCCA | 1 cut(s) | 3254 |
| BbsI | GAAGAC | 8 cut(s) | 1151, 1459, 1560, 2264, 2477, 2690, 3066, 3453 |
| Bbv12I | GWGCWC | 1 cut(s) | 1228 |
| BbvI | GCAGC | 5 cut(s) | 190, 309, 613, 2912, 3465 |
| BccI | CCATC | 6 cut(s) | 924, 1442, 1792, 3211, 3683, 3758 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1376, 1410, 2961, 2995 |
| BciT130I | CCWGG | 3 cut(s) | 1505, 1995, 3486 |
| BciVI | GTATCC | 2 cut(s) | 1776, 3686 |
| BcnI | CCSGG | 3 cut(s) | 1524, 3417, 3753 |
| BcoDI | GTCTC | 2 cut(s) | 939, 1830 |
| BfaI | CTAG | 8 cut(s) | 578, 990, 1295, 1322, 1376, 1961, 3144, 3927 |
| BfmI | CTRYAG | 2 cut(s) | 1808, 3471 |
| BfoI | RGCGCY | 1 cut(s) | 3225 |
| BfrI | CTTAAG | 2 cut(s) | 782, 3368 |
| BfuAI | ACCTGC | 3 cut(s) | 1518, 1716, 1955 |
| BfuI | GTATCC | 2 cut(s) | 1776, 3686 |
| BglII | AGATCT | 5 cut(s) | 443, 2260, 2521, 2734, 3091 |
| BisI | GCNGC | 6 cut(s) | 204, 323, 602, 2901, 3175, 3479 |
| BlsI | GCNGC | 6 cut(s) | 205, 324, 603, 2902, 3176, 3480 |
| BmcAI | AGTACT | 1 cut(s) | 1179 |
| Bme1390I | CCNGG | 6 cut(s) | 1505, 1524, 1995, 3417, 3486, 3753 |
| Bme18I | GGWCC | 3 cut(s) | 3570, 3620, 3811 |
| BmeT110I | CYCGRG | 1 cut(s) | 3122 |
| BmgT120I | GGNCC | 7 cut(s) | 2359, 2572, 3133, 3570, 3591, 3620, 3811 |
| BmiI | GGNNCC | 6 cut(s) | 853, 1650, 1706, 3621, 3812, 3997 |
| BmrFI | CCNGG | 6 cut(s) | 1505, 1524, 1995, 3417, 3486, 3753 |
| BmrI | ACTGGG | 5 cut(s) | 1190, 2196, 3029, 3048, 3984 |
| BmuI | ACTGGG | 5 cut(s) | 1190, 2196, 3029, 3048, 3984 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2145, 3618 |
| BpiI | GAAGAC | 8 cut(s) | 1151, 1459, 1560, 2264, 2477, 2690, 3066, 3453 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 211, 243, 698, 730, 700, 732, 879, 911 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| Bpu14I | TTCGAA | 1 cut(s) | 1849 |
| BpuEI | CTTGAG | 5 cut(s) | 577, 1967, 2479, 2692, 3179 |
| BpuMI | CCSGG | 3 cut(s) | 1524, 3417, 3753 |
| BsaAI | YACGTR | 2 cut(s) | 2075, 2176 |
| BsaBI | GATNNNNATC | 5 cut(s) | 342, 1296, 2526, 2739, 3090 |
| BsaHI | GRCGYC | 2 cut(s) | 639, 1557 |
| BsaI | GGTCTC | 1 cut(s) | 939 |
| BsaJI | CCNNGG | 3 cut(s) | 1993, 3123, 3623 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1623, 1653 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1714, 3454, 3629, 3689 |
| Bse1I | ACTGG | 8 cut(s) | 605, 1185, 1380, 1588, 2191, 3024, 3054, 3990 |
| Bse21I | CCTNAGG | 1 cut(s) | 1713 |
| Bse3DI | GCAATG | 2 cut(s) | 1326, 3350 |
| Bse8I | GATNNNNATC | 5 cut(s) | 342, 1296, 2526, 2739, 3090 |
| BseBI | CCWGG | 3 cut(s) | 1505, 1995, 3486 |
| BseDI | CCNNGG | 3 cut(s) | 1993, 3123, 3623 |
| BseJI | GATNNNNATC | 5 cut(s) | 342, 1296, 2526, 2739, 3090 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1714, 3454, 3629, 3689 |
| BseMI | GCAATG | 2 cut(s) | 1326, 3350 |
| BseMII | CTCAG | 7 cut(s) | 59, 1220, 1489, 1814, 1883, 3109, 3578 |
| BseNI | ACTGG | 8 cut(s) | 605, 1185, 1380, 1588, 2191, 3024, 3054, 3990 |
| BseRI | GAGGAG | 7 cut(s) | 33, 2180, 2366, 2579, 2836, 3530, 3854 |
| BseSI | GKGCMC | 1 cut(s) | 1228 |
| BseXI | GCAGC | 5 cut(s) | 190, 309, 613, 2912, 3465 |
| BsgI | GTGCAG | 2 cut(s) | 452, 1552 |
| BshFI | GGCC | 7 cut(s) | 827, 2361, 2574, 2718, 3135, 3254, 3593 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1228 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3122 |
| BsiSI | CCGG | 6 cut(s) | 1081, 1523, 2774, 2969, 3417, 3753 |
| BslFI | GGGAC | 2 cut(s) | 1731, 3279 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1714, 3454, 3629, 3689 |
| BsmAI | GTCTC | 2 cut(s) | 939, 1830 |
| BsmFI | GGGAC | 2 cut(s) | 1731, 3279 |
| BsmI | GAATGC | 4 cut(s) | 302, 1088, 2223, 3004 |
| BsnI | GGCC | 7 cut(s) | 827, 2361, 2574, 2718, 3135, 3254, 3593 |
| Bso31I | GGTCTC | 1 cut(s) | 939 |
| BsoBI | CYCGRG | 1 cut(s) | 3122 |
| Bsp119I | TTCGAA | 1 cut(s) | 1849 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1228 |
| Bsp1407I | TGTACA | 1 cut(s) | 1970 |
| Bsp19I | CCATGG | 1 cut(s) | 3623 |
| BspACI | CCGC | 5 cut(s) | 643, 669, 698, 1501, 3174 |
| BspANI | GGCC | 7 cut(s) | 827, 2361, 2574, 2718, 3135, 3254, 3593 |
| BspCNI | CTCAG | 7 cut(s) | 58, 1221, 1488, 1813, 1884, 3108, 3579 |
| BspHI | TCATGA | 5 cut(s) | 397, 718, 844, 1489, 4009 |
| BspLI | GGNNCC | 6 cut(s) | 853, 1650, 1706, 3621, 3812, 3997 |
| BspMI | ACCTGC | 3 cut(s) | 1518, 1716, 1955 |
| BspPI | GGATC | 5 cut(s) | 152, 338, 1292, 1299, 1422 |
| BspT104I | TTCGAA | 1 cut(s) | 1849 |
| BspTI | CTTAAG | 2 cut(s) | 782, 3368 |
| BspTNI | GGTCTC | 1 cut(s) | 939 |
| BsrBI | CCGCTC | 1 cut(s) | 698 |
| BsrDI | GCAATG | 2 cut(s) | 1326, 3350 |
| BsrGI | TGTACA | 1 cut(s) | 1970 |
| BsrI | ACTGG | 8 cut(s) | 605, 1185, 1380, 1588, 2191, 3024, 3054, 3990 |
| BssECI | CCNNGG | 3 cut(s) | 1993, 3123, 3623 |
| BssNI | GRCGYC | 2 cut(s) | 639, 1557 |
| BssT1I | CCWWGG | 1 cut(s) | 3623 |
| Bst2UI | CCWGG | 3 cut(s) | 1505, 1995, 3486 |
| Bst4CI | ACNGT | 5 cut(s) | 319, 1223, 2023, 3305, 3472 |
| Bst6I | CTCTTC | 4 cut(s) | 1071, 1237, 1299, 3951 |
| BstACI | GRCGYC | 2 cut(s) | 639, 1557 |
| BstAFI | CTTAAG | 2 cut(s) | 782, 3368 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1471 |
| BstAUI | TGTACA | 1 cut(s) | 1970 |
| BstBAI | YACGTR | 2 cut(s) | 2075, 2176 |
| BstBI | TTCGAA | 1 cut(s) | 1849 |
| BstC8I | GCNNGC | 3 cut(s) | 2065, 2432, 2645 |
| BstDSI | CCRYGG | 1 cut(s) | 3623 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1712 |
| BstH2I | RGCGCY | 1 cut(s) | 3225 |
| BstHHI | GCGC | 3 cut(s) | 3224, 3682, 3983 |
| BstMAI | GTCTC | 2 cut(s) | 939, 1830 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 78, 200, 1201, 1471, 2427, 3876 |
| BstNI | CCWGG | 3 cut(s) | 1505, 1995, 3486 |
| BstNSI | RCATGY | 4 cut(s) | 1335, 1568, 2434, 2647 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2145, 3618 |
| BstSCI | CCNGG | 6 cut(s) | 1503, 1522, 1993, 3415, 3484, 3751 |
| BstSFI | CTRYAG | 2 cut(s) | 1808, 3471 |
| BstSLI | GKGCMC | 1 cut(s) | 1228 |
| BstV1I | GCAGC | 5 cut(s) | 190, 309, 613, 2912, 3465 |
| BstV2I | GAAGAC | 8 cut(s) | 1151, 1459, 1560, 2264, 2477, 2690, 3066, 3453 |
| BstX2I | RGATCY | 8 cut(s) | 443, 1291, 1297, 1427, 2260, 2521, 2734, 3091 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1583, 3262, 4022 |
| BstYI | RGATCY | 8 cut(s) | 443, 1291, 1297, 1427, 2260, 2521, 2734, 3091 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1713 |
| BsuI | GTATCC | 2 cut(s) | 1776, 3686 |
| BsuRI | GGCC | 7 cut(s) | 827, 2361, 2574, 2718, 3135, 3254, 3593 |
| BtgI | CCRYGG | 1 cut(s) | 3623 |
| BtgZI | GCGATG | 2 cut(s) | 96, 3907 |
| BtsI | GCAGTG | 5 cut(s) | 117, 2074, 2287, 2500, 2713 |
| BveI | ACCTGC | 3 cut(s) | 1518, 1716, 1955 |
| Cac8I | GCNNGC | 3 cut(s) | 2065, 2432, 2645 |
| CciI | TCATGA | 5 cut(s) | 397, 718, 844, 1489, 4009 |
| CfoI | GCGC | 3 cut(s) | 3224, 3682, 3983 |
| Cfr13I | GGNCC | 7 cut(s) | 2359, 2572, 3133, 3570, 3591, 3620, 3811 |
| CseI | GACGC | 1 cut(s) | 2892 |
| Csp6I | GTAC | 7 cut(s) | 356, 1178, 1971, 2072, 2378, 2591, 3439 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2478, 2513, 2691, 2726 |
| CviQI | GTAC | 7 cut(s) | 356, 1178, 1971, 2072, 2378, 2591, 3439 |
| DraI | TTTAAA | 3 cut(s) | 379, 1930, 3703 |
| EaeI | YGGCCR | 1 cut(s) | 3252 |
| Eam1104I | CTCTTC | 4 cut(s) | 1071, 1237, 1299, 3951 |
| EarI | CTCTTC | 4 cut(s) | 1071, 1237, 1299, 3951 |
| EciI | GGCGGA | 1 cut(s) | 1490 |
| Eco130I | CCWWGG | 1 cut(s) | 3623 |
| Eco31I | GGTCTC | 1 cut(s) | 939 |
| Eco32I | GATATC | 1 cut(s) | 3721 |
| Eco47I | GGWCC | 3 cut(s) | 3570, 3620, 3811 |
| Eco47III | AGCGCT | 1 cut(s) | 3223 |
| Eco57I | CTGAAG | 5 cut(s) | 477, 1052, 1128, 1323, 1611 |
| Eco81I | CCTNAGG | 1 cut(s) | 1713 |
| Eco88I | CYCGRG | 1 cut(s) | 3122 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1712 |
| EcoRI | GAATTC | 2 cut(s) | 288, 481 |
| EcoRII | CCWGG | 3 cut(s) | 1503, 1993, 3484 |
| EcoRV | GATATC | 1 cut(s) | 3721 |
| EcoT14I | CCWWGG | 1 cut(s) | 3623 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 302, 1467 |
| ErhI | CCWWGG | 1 cut(s) | 3623 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1104, 1136 |
| FaqI | GGGAC | 2 cut(s) | 1731, 3279 |
| FauI | CCCGC | 1 cut(s) | 662 |
| FblI | GTMKAC | 1 cut(s) | 778 |
| Fnu4HI | GCNGC | 6 cut(s) | 204, 323, 602, 2901, 3175, 3479 |
| Fsp4HI | GCNGC | 6 cut(s) | 204, 323, 602, 2901, 3175, 3479 |
| FspBI | CTAG | 8 cut(s) | 578, 990, 1295, 1322, 1376, 1961, 3144, 3927 |
| GlaI | GCGC | 3 cut(s) | 3223, 3681, 3982 |
| GluI | GCNGC | 6 cut(s) | 204, 323, 602, 2901, 3175, 3479 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HaeII | RGCGCY | 1 cut(s) | 3225 |
| HaeIII | GGCC | 7 cut(s) | 827, 2361, 2574, 2718, 3135, 3254, 3593 |
| HapII | CCGG | 6 cut(s) | 1081, 1523, 2774, 2969, 3417, 3753 |
| HgaI | GACGC | 1 cut(s) | 2892 |
| HhaI | GCGC | 3 cut(s) | 3224, 3682, 3983 |
| Hin1I | GRCGYC | 2 cut(s) | 639, 1557 |
| Hin6I | GCGC | 3 cut(s) | 3222, 3680, 3981 |
| HinP1I | GCGC | 3 cut(s) | 3222, 3680, 3981 |
| HincII | GTYRAC | 5 cut(s) | 261, 1915, 1990, 3301, 3647 |
| HindII | GTYRAC | 5 cut(s) | 261, 1915, 1990, 3301, 3647 |
| HindIII | AAGCTT | 5 cut(s) | 1819, 2120, 2546, 2759, 2807 |
| HpaI | GTTAAC | 1 cut(s) | 3301 |
| HpaII | CCGG | 6 cut(s) | 1081, 1523, 2774, 2969, 3417, 3753 |
| HphI | GGTGA | 4 cut(s) | 890, 2898, 3380, 3437 |
| Hpy99I | CGWCG | 1 cut(s) | 3617 |
| HpyCH4III | ACNGT | 5 cut(s) | 319, 1223, 2023, 3305, 3472 |
| HpyCH4IV | ACGT | 4 cut(s) | 639, 1557, 2074, 2175 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 78, 200, 1201, 1471, 2427, 3876 |
| HpySE526I | ACGT | 4 cut(s) | 639, 1557, 2074, 2175 |
| Hsp92I | GRCGYC | 2 cut(s) | 639, 1557 |
| HspAI | GCGC | 3 cut(s) | 3222, 3680, 3981 |
| KspAI | GTTAAC | 1 cut(s) | 3301 |
| LmnI | GCTCC | 5 cut(s) | 851, 1654, 2167, 3418, 3841 |
| Lsp1109I | GCAGC | 5 cut(s) | 190, 309, 613, 2912, 3465 |
| MaeI | CTAG | 8 cut(s) | 578, 990, 1295, 1322, 1376, 1961, 3144, 3927 |
| MaeII | ACGT | 4 cut(s) | 639, 1557, 2074, 2175 |
| MbiI | CCGCTC | 1 cut(s) | 698 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MflI | RGATCY | 8 cut(s) | 443, 1291, 1297, 1427, 2260, 2521, 2734, 3091 |
| MhlI | GDGCHC | 1 cut(s) | 1228 |
| MlsI | TGGCCA | 1 cut(s) | 3254 |
| MluNI | TGGCCA | 1 cut(s) | 3254 |
| MlyI | GAGTC | 4 cut(s) | 1610, 1903, 3531, 3937 |
| MmeI | TCCRAC | 1 cut(s) | 562 |
| Mox20I | TGGCCA | 1 cut(s) | 3254 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 302, 1467 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 2229 |
| MscI | TGGCCA | 1 cut(s) | 3254 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1209, 2178, 3450 |
| Msp20I | TGGCCA | 1 cut(s) | 3254 |
| MspCI | CTTAAG | 2 cut(s) | 782, 3368 |
| MspI | CCGG | 6 cut(s) | 1081, 1523, 2774, 2969, 3417, 3753 |
| MspR9I | CCNGG | 6 cut(s) | 1505, 1524, 1995, 3417, 3486, 3753 |
| MunI | CAATTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 4 cut(s) | 302, 1088, 2223, 3004 |
| MvaI | CCWGG | 3 cut(s) | 1505, 1995, 3486 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 78, 200, 1201, 1471, 2427, 3876 |
| NciI | CCSGG | 3 cut(s) | 1524, 3417, 3753 |
| NcoI | CCATGG | 1 cut(s) | 3623 |
| NlaIV | GGNNCC | 6 cut(s) | 853, 1650, 1706, 3621, 3812, 3997 |
| NmuCI | GTSAC | 6 cut(s) | 878, 1895, 2904, 2960, 3029, 3497 |
| NsiI | ATGCAT | 3 cut(s) | 256, 302, 1467 |
| NspI | RCATGY | 4 cut(s) | 1335, 1568, 2434, 2647 |
| NspV | TTCGAA | 1 cut(s) | 1849 |
| OliI | CACNNNNGTG | 1 cut(s) | 3450 |
| PaeI | GCATGC | 2 cut(s) | 2434, 2647 |
| PagI | TCATGA | 5 cut(s) | 397, 718, 844, 1489, 4009 |
| PaqCI | CACCTGC | 1 cut(s) | 1518 |
| PciI | ACATGT | 1 cut(s) | 1564 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 645, 1766 |
| PctI | GAATGC | 4 cut(s) | 302, 1088, 2223, 3004 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 2229 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3454, 3629 |
| PfoI | TCCNGGA | 1 cut(s) | 3415 |
| PkrI | GCNGC | 6 cut(s) | 205, 324, 603, 2902, 3176, 3480 |
| PleI | GAGTC | 4 cut(s) | 1610, 1902, 3531, 3937 |
| PpsI | GAGTC | 4 cut(s) | 1610, 1902, 3531, 3937 |
| Ppu21I | YACGTR | 2 cut(s) | 2075, 2176 |
| PscI | ACATGT | 1 cut(s) | 1564 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2145, 3618 |
| PshBI | ATTAAT | 2 cut(s) | 1887, 3882 |
| PsiI | TTATAA | 2 cut(s) | 863, 1142 |
| Psp6I | CCWGG | 3 cut(s) | 1503, 1993, 3484 |
| PspGI | CCWGG | 3 cut(s) | 1503, 1993, 3484 |
| PspN4I | GGNNCC | 6 cut(s) | 853, 1650, 1706, 3621, 3812, 3997 |
| PspPI | GGNCC | 7 cut(s) | 2359, 2572, 3133, 3570, 3591, 3620, 3811 |
| PsuI | RGATCY | 8 cut(s) | 443, 1291, 1297, 1427, 2260, 2521, 2734, 3091 |
| RsaI | GTAC | 7 cut(s) | 357, 1179, 1972, 2073, 2379, 2592, 3440 |
| RsaNI | GTAC | 7 cut(s) | 356, 1178, 1971, 2072, 2378, 2591, 3439 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1209, 2178, 3450 |
| SatI | GCNGC | 6 cut(s) | 204, 323, 602, 2901, 3175, 3479 |
| Sau96I | GGNCC | 7 cut(s) | 2359, 2572, 3133, 3570, 3591, 3620, 3811 |
| ScaI | AGTACT | 1 cut(s) | 1179 |
| SchI | GAGTC | 4 cut(s) | 1610, 1903, 3531, 3937 |
| ScrFI | CCNGG | 6 cut(s) | 1505, 1524, 1995, 3417, 3486, 3753 |
| SduI | GDGCHC | 1 cut(s) | 1228 |
| SfcI | CTRYAG | 2 cut(s) | 1808, 3471 |
| SfuI | TTCGAA | 1 cut(s) | 1849 |
| SinI | GGWCC | 3 cut(s) | 3570, 3620, 3811 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1209, 2178, 3450 |
| SmlI | CTYRAG | 7 cut(s) | 592, 782, 1946, 2458, 2671, 3158, 3368 |
| SmoI | CTYRAG | 7 cut(s) | 592, 782, 1946, 2458, 2671, 3158, 3368 |
| SphI | GCATGC | 2 cut(s) | 2434, 2647 |
| SsiI | CCGC | 5 cut(s) | 643, 669, 698, 1501, 3174 |
| SspI | AATATT | 5 cut(s) | 330, 935, 1317, 2317, 3874 |
| SspMI | CTAG | 8 cut(s) | 578, 990, 1295, 1322, 1376, 1961, 3144, 3927 |
| StyD4I | CCNGG | 6 cut(s) | 1503, 1522, 1993, 3415, 3484, 3751 |
| StyI | CCWWGG | 1 cut(s) | 3623 |
| TaaI | ACNGT | 5 cut(s) | 319, 1223, 2023, 3305, 3472 |
| TaiI | ACGT | 4 cut(s) | 642, 1560, 2077, 2178 |
| TaqI | TCGA | 5 cut(s) | 218, 1173, 1360, 1849, 3464 |
| TatI | WGTACW | 2 cut(s) | 1177, 1970 |
| TauI | GCSGC | 1 cut(s) | 3177 |
| TseFI | GTSAC | 6 cut(s) | 878, 1895, 2904, 2960, 3029, 3497 |
| TseI | GCWGC | 5 cut(s) | 203, 322, 601, 2900, 3478 |
| Tsp45I | GTSAC | 6 cut(s) | 878, 1895, 2904, 2960, 3029, 3497 |
| TspGWI | ACGGA | 3 cut(s) | 1758, 1759, 3803 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3454, 3629 |
| Vha464I | CTTAAG | 2 cut(s) | 782, 3368 |
| VneI | GTGCAC | 1 cut(s) | 1224 |
| VpaK11BI | GGWCC | 3 cut(s) | 3570, 3620, 3811 |
| VspI | ATTAAT | 2 cut(s) | 1887, 3882 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1712 |
| XapI | RAATTY | 7 cut(s) | 288, 481, 585, 722, 1260, 1873, 3426 |
| XbaI | TCTAGA | 1 cut(s) | 1294 |
| XceI | RCATGY | 4 cut(s) | 1335, 1568, 2434, 2647 |
| XmiI | GTMKAC | 1 cut(s) | 778 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 2229 |
| XspI | CTAG | 8 cut(s) | 578, 990, 1295, 1322, 1376, 1961, 3144, 3927 |
| ZraI | GACGTC | 2 cut(s) | 640, 1558 |
| ZrmI | AGTACT | 1 cut(s) | 1179 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 302, 1467 |