ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 57 |
| AcoI | YGGCCR | 1 cut(s) | 58 |
| AcyI | GRCGYC | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AgsI | TTSAA | 2 cut(s) | 112, 153 |
| AjiI | CACGTC | 1 cut(s) | 210 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 92, 124 |
| AoxI | GGCC | 2 cut(s) | 42, 58 |
| BbvCI | CCTCAGC | 1 cut(s) | 239 |
| BccI | CCATC | 1 cut(s) | 86 |
| BceAI | ACGGC | 1 cut(s) | 29 |
| BglII | AGATCT | 1 cut(s) | 262 |
| BisI | GCNGC | 1 cut(s) | 58 |
| BlsI | GCNGC | 1 cut(s) | 59 |
| BmgBI | CACGTC | 1 cut(s) | 210 |
| BmsI | GCATC | 1 cut(s) | 25 |
| Bpu10I | CCTNAGC | 1 cut(s) | 239 |
| BsaAI | YACGTR | 1 cut(s) | 228 |
| BsaHI | GRCGYC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 1 cut(s) | 269 |
| Bse1I | ACTGG | 3 cut(s) | 61, 169, 190 |
| Bse3DI | GCAATG | 1 cut(s) | 179 |
| BseDI | CCNNGG | 1 cut(s) | 269 |
| BseGI | GGATG | 2 cut(s) | 10, 97 |
| BseMI | GCAATG | 1 cut(s) | 179 |
| BseMII | CTCAG | 1 cut(s) | 230 |
| BseNI | ACTGG | 3 cut(s) | 61, 169, 190 |
| BseRI | GAGGAG | 1 cut(s) | 256 |
| BshFI | GGCC | 2 cut(s) | 44, 60 |
| BsnI | GGCC | 2 cut(s) | 44, 60 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| Bsp19I | CCATGG | 1 cut(s) | 269 |
| BspACI | CCGC | 1 cut(s) | 57 |
| BspANI | GGCC | 2 cut(s) | 44, 60 |
| BspCNI | CTCAG | 1 cut(s) | 231 |
| BsrDI | GCAATG | 1 cut(s) | 179 |
| BsrI | ACTGG | 3 cut(s) | 61, 169, 190 |
| BssECI | CCNNGG | 1 cut(s) | 269 |
| BssMI | GATC | 1 cut(s) | 262 |
| BssNI | GRCGYC | 1 cut(s) | 257 |
| BssT1I | CCWWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 2 cut(s) | 38, 224 |
| BstACI | GRCGYC | 1 cut(s) | 257 |
| BstBAI | YACGTR | 1 cut(s) | 228 |
| BstDEI | CTNAG | 1 cut(s) | 239 |
| BstDSI | CCRYGG | 1 cut(s) | 269 |
| BstF5I | GGATG | 2 cut(s) | 10, 97 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstX2I | RGATCY | 1 cut(s) | 262 |
| BstYI | RGATCY | 1 cut(s) | 262 |
| BsuRI | GGCC | 2 cut(s) | 44, 60 |
| BtgI | CCRYGG | 1 cut(s) | 269 |
| BtrI | CACGTC | 1 cut(s) | 210 |
| BtsCI | GGATG | 2 cut(s) | 10, 97 |
| BtsIMutI | CAGTG | 2 cut(s) | 162, 220 |
| CseI | GACGC | 1 cut(s) | 246 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviAII | CATG | 1 cut(s) | 270 |
| CviJI | RGCY | 2 cut(s) | 44, 60 |
| CviKI_1 | RGCY | 2 cut(s) | 44, 60 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 1 cut(s) | 239 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| EaeI | YGGCCR | 1 cut(s) | 58 |
| Eco130I | CCWWGG | 1 cut(s) | 269 |
| EcoT14I | CCWWGG | 1 cut(s) | 269 |
| ErhI | CCWWGG | 1 cut(s) | 269 |
| FaeI | CATG | 1 cut(s) | 273 |
| FaiI | YATR | 2 cut(s) | 195, 271 |
| FatI | CATG | 1 cut(s) | 269 |
| Fnu4HI | GCNGC | 1 cut(s) | 58 |
| FokI | GGATG | 2 cut(s) | 17, 104 |
| Fsp4HI | GCNGC | 1 cut(s) | 58 |
| GluI | GCNGC | 1 cut(s) | 58 |
| HaeIII | GGCC | 2 cut(s) | 44, 60 |
| HgaI | GACGC | 1 cut(s) | 246 |
| Hin1I | GRCGYC | 1 cut(s) | 257 |
| Hin1II | CATG | 1 cut(s) | 273 |
| HinfI | GANTC | 4 cut(s) | 127, 145, 189, 232 |
| Hpy188I | TCNGA | 3 cut(s) | 21, 214, 262 |
| Hpy188III | TCNNGA | 4 cut(s) | 66, 98, 112, 142 |
| Hpy99I | CGWCG | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 38, 224 |
| HpyCH4IV | ACGT | 2 cut(s) | 209, 227 |
| HpyCH4V | TGCA | 2 cut(s) | 162, 172 |
| HpyF3I | CTNAG | 1 cut(s) | 239 |
| HpySE526I | ACGT | 2 cut(s) | 209, 227 |
| Hsp92I | GRCGYC | 1 cut(s) | 257 |
| Hsp92II | CATG | 1 cut(s) | 273 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LpnPI | CCDG | 7 cut(s) | 51, 67, 74, 83, 91, 150, 171 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeII | ACGT | 2 cut(s) | 209, 227 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 1 cut(s) | 257 |
| MflI | RGATCY | 1 cut(s) | 262 |
| MlyI | GAGTC | 1 cut(s) | 241 |
| MmeI | TCCRAC | 1 cut(s) | 192 |
| MnlI | CCTC | 6 cut(s) | 6, 34, 62, 234, 237, 247 |
| MseI | TTAA | 2 cut(s) | 182, 248 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| NcoI | CCATGG | 1 cut(s) | 269 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 1 cut(s) | 273 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 122 |
| PfeI | GAWTC | 3 cut(s) | 127, 145, 189 |
| PflFI | GACNNNGTC | 1 cut(s) | 118 |
| PkrI | GCNGC | 1 cut(s) | 59 |
| PleI | GAGTC | 1 cut(s) | 240 |
| PpsI | GAGTC | 1 cut(s) | 240 |
| Ppu21I | YACGTR | 1 cut(s) | 228 |
| PsuI | RGATCY | 1 cut(s) | 262 |
| PsyI | GACNNNGTC | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| SaqAI | TTAA | 2 cut(s) | 182, 248 |
| SatI | GCNGC | 1 cut(s) | 58 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| SchI | GAGTC | 1 cut(s) | 241 |
| SetI | ASST | 6 cut(s) | 29, 73, 110, 212, 230, 248 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| SsiI | CCGC | 1 cut(s) | 57 |
| StyI | CCWWGG | 1 cut(s) | 269 |
| TaaI | ACNGT | 2 cut(s) | 38, 224 |
| TaiI | ACGT | 2 cut(s) | 212, 230 |
| TauI | GCSGC | 1 cut(s) | 60 |
| TfiI | GAWTC | 3 cut(s) | 127, 145, 189 |
| Tru1I | TTAA | 2 cut(s) | 182, 248 |
| Tru9I | TTAA | 2 cut(s) | 182, 248 |
| TscAI | CASTG | 2 cut(s) | 169, 227 |
| TspDTI | ATGAA | 1 cut(s) | 137 |
| TspRI | CASTG | 2 cut(s) | 169, 227 |
| Tth111I | GACNNNGTC | 1 cut(s) | 118 |