ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 194 |
| Acc36I | ACCTGC | 1 cut(s) | 194 |
| Acc65I | GGTACC | 1 cut(s) | 809 |
| AccB1I | GGYRCC | 2 cut(s) | 706, 809 |
| AccIII | TCCGGA | 1 cut(s) | 760 |
| AclWI | GGATC | 3 cut(s) | 12, 525, 550 |
| AcuI | CTGAAG | 1 cut(s) | 478 |
| AfaI | GTAC | 6 cut(s) | 15, 303, 601, 753, 811, 963 |
| AfeI | AGCGCT | 1 cut(s) | 504 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 589, 1075 |
| AflII | CTTAAG | 1 cut(s) | 1055 |
| AflIII | ACRYGT | 1 cut(s) | 1206 |
| AgsI | TTSAA | 4 cut(s) | 733, 740, 998, 1202 |
| AjiI | CACGTC | 1 cut(s) | 1191 |
| AjnI | CCWGG | 2 cut(s) | 582, 1049 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 968, 1000 |
| AluBI | AGCT | 7 cut(s) | 21, 551, 577, 637, 693, 982, 1097 |
| AluI | AGCT | 7 cut(s) | 21, 551, 577, 637, 693, 982, 1097 |
| Alw21I | GWGCWC | 1 cut(s) | 846 |
| Alw26I | GTCTC | 2 cut(s) | 107, 1024 |
| AlwI | GGATC | 3 cut(s) | 12, 525, 550 |
| Aor13HI | TCCGGA | 1 cut(s) | 760 |
| Aor51HI | AGCGCT | 1 cut(s) | 504 |
| AoxI | GGCC | 2 cut(s) | 461, 957 |
| ApeKI | GCWGC | 2 cut(s) | 577, 1150 |
| Asp718I | GGTACC | 1 cut(s) | 809 |
| AspA2I | CCTAGG | 1 cut(s) | 529 |
| AspLEI | GCGC | 3 cut(s) | 265, 505, 582 |
| AspS9I | GGNCC | 4 cut(s) | 461, 931, 988, 1066 |
| AsuHPI | GGTGA | 1 cut(s) | 431 |
| AsuNHI | GCTAGC | 1 cut(s) | 689 |
| AvaII | GGWCC | 3 cut(s) | 931, 988, 1066 |
| AvrII | CCTAGG | 1 cut(s) | 529 |
| BaeGI | GKGCMC | 3 cut(s) | 64, 296, 711 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 704, 737 |
| BanI | GGYRCC | 2 cut(s) | 706, 809 |
| BbsI | GAAGAC | 1 cut(s) | 1114 |
| Bbv12I | GWGCWC | 1 cut(s) | 846 |
| BbvI | GCAGC | 2 cut(s) | 564, 1162 |
| BccI | CCATC | 3 cut(s) | 452, 613, 861 |
| BceAI | ACGGC | 1 cut(s) | 944 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 866, 900 |
| BciT130I | CCWGG | 2 cut(s) | 584, 1051 |
| BcoDI | GTCTC | 2 cut(s) | 107, 1024 |
| BfaI | CTAG | 4 cut(s) | 530, 690, 921, 1213 |
| BfmI | CTRYAG | 1 cut(s) | 149 |
| BfoI | RGCGCY | 1 cut(s) | 506 |
| BfrI | CTTAAG | 1 cut(s) | 1055 |
| BfuAI | ACCTGC | 1 cut(s) | 194 |
| BisI | GCNGC | 4 cut(s) | 314, 464, 578, 1151 |
| BlnI | CCTAGG | 1 cut(s) | 529 |
| BlsI | GCNGC | 4 cut(s) | 315, 465, 579, 1152 |
| Bme1390I | CCNGG | 2 cut(s) | 584, 1051 |
| Bme18I | GGWCC | 3 cut(s) | 931, 988, 1066 |
| BmgBI | CACGTC | 1 cut(s) | 1191 |
| BmgT120I | GGNCC | 4 cut(s) | 461, 931, 988, 1066 |
| BmiI | GGNNCC | 5 cut(s) | 536, 699, 708, 811, 1067 |
| BmrFI | CCNGG | 2 cut(s) | 584, 1051 |
| BmsI | GCATC | 8 cut(s) | 37, 237, 265, 274, 474, 1018, 1129, 1156 |
| BmtI | GCTAGC | 1 cut(s) | 693 |
| BpiI | GAAGAC | 1 cut(s) | 1114 |
| Bpu10I | CCTNAGC | 1 cut(s) | 467 |
| BsaAI | YACGTR | 1 cut(s) | 555 |
| BsaJI | CCNNGG | 4 cut(s) | 31, 404, 529, 538 |
| BsaWI | WCCGGW | 2 cut(s) | 760, 1068 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 589, 1075 |
| Bse1I | ACTGG | 2 cut(s) | 325, 811 |
| BseAI | TCCGGA | 1 cut(s) | 760 |
| BseBI | CCWGG | 2 cut(s) | 584, 1051 |
| BseDI | CCNNGG | 4 cut(s) | 31, 404, 529, 538 |
| BseGI | GGATG | 5 cut(s) | 252, 280, 757, 1171, 1177 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 589, 1075 |
| BseMII | CTCAG | 6 cut(s) | 31, 95, 179, 579, 587, 945 |
| BseNI | ACTGG | 2 cut(s) | 325, 811 |
| BseRI | GAGGAG | 2 cut(s) | 797, 1175 |
| BseSI | GKGCMC | 3 cut(s) | 64, 296, 711 |
| BseXI | GCAGC | 2 cut(s) | 564, 1162 |
| BseYI | CCCAGC | 1 cut(s) | 770 |
| BshFI | GGCC | 2 cut(s) | 463, 959 |
| BshNI | GGYRCC | 2 cut(s) | 706, 809 |
| BsiHKAI | GWGCWC | 1 cut(s) | 846 |
| BsiSI | CCGG | 2 cut(s) | 761, 1069 |
| BslFI | GGGAC | 1 cut(s) | 1079 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 589, 1075 |
| BsmAI | GTCTC | 2 cut(s) | 107, 1024 |
| BsmFI | GGGAC | 1 cut(s) | 1079 |
| BsmI | GAATGC | 1 cut(s) | 628 |
| BsnI | GGCC | 2 cut(s) | 463, 959 |
| Bsp1286I | GDGCHC | 4 cut(s) | 64, 296, 711, 846 |
| Bsp13I | TCCGGA | 1 cut(s) | 760 |
| Bsp143I | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| Bsp19I | CCATGG | 2 cut(s) | 404, 538 |
| BspANI | GGCC | 2 cut(s) | 463, 959 |
| BspCNI | CTCAG | 6 cut(s) | 30, 94, 180, 578, 586, 946 |
| BspEI | TCCGGA | 1 cut(s) | 760 |
| BspLI | GGNNCC | 5 cut(s) | 536, 699, 708, 811, 1067 |
| BspMI | ACCTGC | 1 cut(s) | 194 |
| BspOI | GCTAGC | 1 cut(s) | 693 |
| BspPI | GGATC | 3 cut(s) | 12, 525, 550 |
| BspT107I | GGYRCC | 2 cut(s) | 706, 809 |
| BspTI | CTTAAG | 1 cut(s) | 1055 |
| BsrI | ACTGG | 2 cut(s) | 325, 811 |
| BssECI | CCNNGG | 4 cut(s) | 31, 404, 529, 538 |
| BssMI | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| BssT1I | CCWWGG | 3 cut(s) | 404, 529, 538 |
| Bst2UI | CCWGG | 2 cut(s) | 584, 1051 |
| Bst4CI | ACNGT | 3 cut(s) | 55, 332, 384 |
| Bst6I | CTCTTC | 2 cut(s) | 129, 1011 |
| BstAFI | CTTAAG | 1 cut(s) | 1055 |
| BstBAI | YACGTR | 1 cut(s) | 555 |
| BstC8I | GCNNGC | 2 cut(s) | 156, 691 |
| BstDEI | CTNAG | 8 cut(s) | 17, 81, 188, 467, 565, 573, 633, 954 |
| BstDSI | CCRYGG | 2 cut(s) | 404, 538 |
| BstF5I | GGATG | 5 cut(s) | 252, 280, 757, 1171, 1177 |
| BstH2I | RGCGCY | 1 cut(s) | 506 |
| BstHHI | GCGC | 3 cut(s) | 265, 505, 582 |
| BstKTI | GATC | 7 cut(s) | 7, 99, 362, 391, 520, 545, 1040 |
| BstMAI | GTCTC | 2 cut(s) | 107, 1024 |
| BstMBI | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 27, 344, 634 |
| BstNI | CCWGG | 2 cut(s) | 584, 1051 |
| BstNSI | RCATGY | 3 cut(s) | 91, 158, 1210 |
| BstSCI | CCNGG | 2 cut(s) | 582, 1049 |
| BstSFI | CTRYAG | 1 cut(s) | 149 |
| BstSLI | GKGCMC | 3 cut(s) | 64, 296, 711 |
| BstV1I | GCAGC | 2 cut(s) | 564, 1162 |
| BstV2I | GAAGAC | 1 cut(s) | 1114 |
| BstX2I | RGATCY | 3 cut(s) | 4, 517, 542 |
| BstYI | RGATCY | 3 cut(s) | 4, 517, 542 |
| BsuRI | GGCC | 2 cut(s) | 463, 959 |
| BtgI | CCRYGG | 2 cut(s) | 404, 538 |
| BtrI | CACGTC | 1 cut(s) | 1191 |
| BtsCI | GGATG | 5 cut(s) | 252, 280, 757, 1171, 1177 |
| BtsIMutI | CAGTG | 1 cut(s) | 62 |
| BveI | ACCTGC | 1 cut(s) | 194 |
| Cac8I | GCNNGC | 2 cut(s) | 156, 691 |
| CfoI | GCGC | 3 cut(s) | 265, 505, 582 |
| Cfr13I | GGNCC | 4 cut(s) | 461, 931, 988, 1066 |
| CseI | GACGC | 1 cut(s) | 1119 |
| Csp6I | GTAC | 6 cut(s) | 14, 302, 600, 752, 810, 962 |
| CviQI | GTAC | 6 cut(s) | 14, 302, 600, 752, 810, 962 |
| DdeI | CTNAG | 8 cut(s) | 17, 81, 188, 467, 565, 573, 633, 954 |
| DpnI | GATC | 7 cut(s) | 6, 98, 361, 390, 519, 544, 1039 |
| DpnII | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| Eam1104I | CTCTTC | 2 cut(s) | 129, 1011 |
| EarI | CTCTTC | 2 cut(s) | 129, 1011 |
| EciI | GGCGGA | 2 cut(s) | 488, 808 |
| Eco130I | CCWWGG | 3 cut(s) | 404, 529, 538 |
| Eco47I | GGWCC | 3 cut(s) | 931, 988, 1066 |
| Eco47III | AGCGCT | 1 cut(s) | 504 |
| Eco57I | CTGAAG | 1 cut(s) | 478 |
| EcoO109I | RGGNCCY | 1 cut(s) | 931 |
| EcoRII | CCWGG | 2 cut(s) | 582, 1049 |
| EcoT14I | CCWWGG | 3 cut(s) | 404, 529, 538 |
| ErhI | CCWWGG | 3 cut(s) | 404, 529, 538 |
| FaqI | GGGAC | 1 cut(s) | 1079 |
| Fnu4HI | GCNGC | 4 cut(s) | 314, 464, 578, 1151 |
| FokI | GGATG | 5 cut(s) | 259, 287, 744, 1178, 1184 |
| Fsp4HI | GCNGC | 4 cut(s) | 314, 464, 578, 1151 |
| FspBI | CTAG | 4 cut(s) | 530, 690, 921, 1213 |
| GlaI | GCGC | 3 cut(s) | 264, 504, 581 |
| GluI | GCNGC | 4 cut(s) | 314, 464, 578, 1151 |
| GsaI | CCCAGC | 1 cut(s) | 774 |
| HaeII | RGCGCY | 1 cut(s) | 506 |
| HaeIII | GGCC | 2 cut(s) | 463, 959 |
| HapII | CCGG | 2 cut(s) | 761, 1069 |
| HgaI | GACGC | 1 cut(s) | 1119 |
| HhaI | GCGC | 3 cut(s) | 265, 505, 582 |
| Hin6I | GCGC | 3 cut(s) | 263, 503, 580 |
| HinP1I | GCGC | 3 cut(s) | 263, 503, 580 |
| HinfI | GANTC | 2 cut(s) | 659, 852 |
| HpaII | CCGG | 2 cut(s) | 761, 1069 |
| HphI | GGTGA | 1 cut(s) | 431 |
| Hpy166II | GTNNAC | 3 cut(s) | 302, 380, 600 |
| Hpy188I | TCNGA | 9 cut(s) | 84, 342, 388, 509, 568, 658, 664, 955, 1092 |
| Hpy188III | TCNNGA | 4 cut(s) | 8, 392, 761, 1013 |
| Hpy8I | GTNNAC | 3 cut(s) | 302, 380, 600 |
| HpyAV | CCTTC | 6 cut(s) | 188, 944, 970, 1004, 1055, 1150 |
| HpyCH4III | ACNGT | 3 cut(s) | 55, 332, 384 |
| HpyCH4IV | ACGT | 3 cut(s) | 12, 554, 1190 |
| HpyCH4V | TGCA | 8 cut(s) | 50, 176, 487, 830, 891, 1009, 1126, 1142 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 27, 344, 634 |
| HpyF3I | CTNAG | 8 cut(s) | 17, 81, 188, 467, 565, 573, 633, 954 |
| HpySE526I | ACGT | 3 cut(s) | 12, 554, 1190 |
| HspAI | GCGC | 3 cut(s) | 263, 503, 580 |
| Kpn2I | TCCGGA | 1 cut(s) | 760 |
| KpnI | GGTACC | 1 cut(s) | 813 |
| Kzo9I | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| LmnI | GCTCC | 1 cut(s) | 979 |
| Lsp1109I | GCAGC | 2 cut(s) | 564, 1162 |
| LweI | GCATC | 8 cut(s) | 37, 237, 265, 274, 474, 1018, 1129, 1156 |
| MaeI | CTAG | 4 cut(s) | 530, 690, 921, 1213 |
| MaeII | ACGT | 3 cut(s) | 12, 554, 1190 |
| MaeIII | GTNAC | 4 cut(s) | 240, 681, 1045, 1186 |
| MalI | GATC | 7 cut(s) | 6, 98, 361, 390, 519, 544, 1039 |
| MboI | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| MboII | GAAGA | 5 cut(s) | 146, 463, 985, 1028, 1119 |
| MflI | RGATCY | 3 cut(s) | 4, 517, 542 |
| MhlI | GDGCHC | 4 cut(s) | 64, 296, 711, 846 |
| MluCI | AATT | 3 cut(s) | 25, 120, 837 |
| MmeI | TCCRAC | 2 cut(s) | 687, 966 |
| MroI | TCCGGA | 1 cut(s) | 760 |
| MseI | TTAA | 2 cut(s) | 426, 1056 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| MspA1I | CMGCKG | 3 cut(s) | 21, 577, 1153 |
| MspCI | CTTAAG | 1 cut(s) | 1055 |
| MspI | CCGG | 2 cut(s) | 761, 1069 |
| MspR9I | CCNGG | 2 cut(s) | 584, 1051 |
| Mva1269I | GAATGC | 1 cut(s) | 628 |
| MvaI | CCWGG | 2 cut(s) | 584, 1051 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 27, 344, 634 |
| NcoI | CCATGG | 2 cut(s) | 404, 538 |
| NdeII | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| NheI | GCTAGC | 1 cut(s) | 689 |
| NlaIV | GGNNCC | 5 cut(s) | 536, 699, 708, 811, 1067 |
| NmeAIII | GCCGAG | 1 cut(s) | 56 |
| NmuCI | GTSAC | 1 cut(s) | 1186 |
| NspI | RCATGY | 3 cut(s) | 91, 158, 1210 |
| PaeI | GCATGC | 1 cut(s) | 158 |
| PaqCI | CACCTGC | 1 cut(s) | 194 |
| PciI | ACATGT | 1 cut(s) | 1206 |
| PctI | GAATGC | 1 cut(s) | 628 |
| PfeI | GAWTC | 2 cut(s) | 659, 852 |
| PkrI | GCNGC | 4 cut(s) | 315, 465, 579, 1152 |
| Ppu21I | YACGTR | 1 cut(s) | 555 |
| PpuMI | RGGWCCY | 1 cut(s) | 931 |
| PscI | ACATGT | 1 cut(s) | 1206 |
| Psp5II | RGGWCCY | 1 cut(s) | 931 |
| Psp6I | CCWGG | 2 cut(s) | 582, 1049 |
| PspFI | CCCAGC | 1 cut(s) | 770 |
| PspGI | CCWGG | 2 cut(s) | 582, 1049 |
| PspN4I | GGNNCC | 5 cut(s) | 536, 699, 708, 811, 1067 |
| PspPI | GGNCC | 4 cut(s) | 461, 931, 988, 1066 |
| PspPPI | RGGWCCY | 1 cut(s) | 931 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 713, 745 |
| PsuI | RGATCY | 3 cut(s) | 4, 517, 542 |
| PvuII | CAGCTG | 2 cut(s) | 21, 577 |
| RsaI | GTAC | 6 cut(s) | 15, 303, 601, 753, 811, 963 |
| RsaNI | GTAC | 6 cut(s) | 14, 302, 600, 752, 810, 962 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SaqAI | TTAA | 2 cut(s) | 426, 1056 |
| SatI | GCNGC | 4 cut(s) | 314, 464, 578, 1151 |
| Sau3AI | GATC | 7 cut(s) | 4, 96, 359, 388, 517, 542, 1037 |
| Sau96I | GGNCC | 4 cut(s) | 461, 931, 988, 1066 |
| ScrFI | CCNGG | 2 cut(s) | 584, 1051 |
| SduI | GDGCHC | 4 cut(s) | 64, 296, 711, 846 |
| SfaNI | GCATC | 8 cut(s) | 37, 237, 265, 274, 474, 1018, 1129, 1156 |
| SfcI | CTRYAG | 1 cut(s) | 149 |
| SinI | GGWCC | 3 cut(s) | 931, 988, 1066 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| SmlI | CTYRAG | 1 cut(s) | 1055 |
| SmoI | CTYRAG | 1 cut(s) | 1055 |
| SphI | GCATGC | 1 cut(s) | 158 |
| Sse9I | AATT | 3 cut(s) | 25, 120, 837 |
| SspMI | CTAG | 4 cut(s) | 530, 690, 921, 1213 |
| StyD4I | CCNGG | 2 cut(s) | 582, 1049 |
| StyI | CCWWGG | 3 cut(s) | 404, 529, 538 |
| TaaI | ACNGT | 3 cut(s) | 55, 332, 384 |
| TaiI | ACGT | 3 cut(s) | 15, 557, 1193 |
| TaqI | TCGA | 1 cut(s) | 525 |
| TasI | AATT | 3 cut(s) | 25, 120, 837 |
| TatI | WGTACW | 1 cut(s) | 301 |
| TauI | GCSGC | 2 cut(s) | 316, 466 |
| TfiI | GAWTC | 2 cut(s) | 659, 852 |
| Tru1I | TTAA | 2 cut(s) | 426, 1056 |
| Tru9I | TTAA | 2 cut(s) | 426, 1056 |
| TscAI | CASTG | 1 cut(s) | 69 |
| TseFI | GTSAC | 1 cut(s) | 1186 |
| TseI | GCWGC | 2 cut(s) | 577, 1150 |
| Tsp45I | GTSAC | 1 cut(s) | 1186 |
| TspDTI | ATGAA | 2 cut(s) | 161, 1076 |
| TspGWI | ACGGA | 3 cut(s) | 259, 365, 845 |
| TspRI | CASTG | 1 cut(s) | 69 |
| Vha464I | CTTAAG | 1 cut(s) | 1055 |
| VpaK11BI | GGWCC | 3 cut(s) | 931, 988, 1066 |
| XceI | RCATGY | 3 cut(s) | 91, 158, 1210 |
| XmaJI | CCTAGG | 1 cut(s) | 529 |
| XspI | CTAG | 4 cut(s) | 530, 690, 921, 1213 |