ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 166, 424 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 224, 256 |
| AluBI | AGCT | 4 cut(s) | 56, 209, 397, 430 |
| AluI | AGCT | 4 cut(s) | 56, 209, 397, 430 |
| Alw26I | GTCTC | 1 cut(s) | 304 |
| ApeKI | GCWGC | 2 cut(s) | 259, 397 |
| AseI | ATTAAT | 1 cut(s) | 33 |
| AspS9I | GGNCC | 1 cut(s) | 294 |
| AsuHPI | GGTGA | 1 cut(s) | 323 |
| AvaII | GGWCC | 1 cut(s) | 294 |
| BbvI | GCAGC | 2 cut(s) | 271, 384 |
| BccI | CCATC | 3 cut(s) | 181, 218, 284 |
| BceAI | ACGGC | 1 cut(s) | 48 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 165, 199 |
| BcoDI | GTCTC | 1 cut(s) | 304 |
| BfaI | CTAG | 2 cut(s) | 206, 272 |
| BfmI | CTRYAG | 1 cut(s) | 45 |
| BisI | GCNGC | 2 cut(s) | 260, 398 |
| BlsI | GCNGC | 2 cut(s) | 261, 399 |
| Bme18I | GGWCC | 1 cut(s) | 294 |
| BmgT120I | GGNCC | 1 cut(s) | 294 |
| BmiI | GGNNCC | 2 cut(s) | 242, 295 |
| BpmI | CTGGAG | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 1 cut(s) | 256 |
| BsaJI | CCNNGG | 1 cut(s) | 401 |
| BsaWI | WCCGGW | 1 cut(s) | 296 |
| Bse118I | RCCGGY | 1 cut(s) | 85 |
| BseDI | CCNNGG | 1 cut(s) | 401 |
| BseMII | CTCAG | 2 cut(s) | 115, 407 |
| BseXI | GCAGC | 2 cut(s) | 271, 384 |
| BsiSI | CCGG | 2 cut(s) | 86, 297 |
| BsmAI | GTCTC | 1 cut(s) | 304 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspCNI | CTCAG | 2 cut(s) | 114, 406 |
| BspLI | GGNNCC | 2 cut(s) | 242, 295 |
| BspMAI | CTGCAG | 1 cut(s) | 49 |
| BsrFI | RCCGGY | 1 cut(s) | 85 |
| BssAI | RCCGGY | 1 cut(s) | 85 |
| BssECI | CCNNGG | 1 cut(s) | 401 |
| BssMI | GATC | 1 cut(s) | 268 |
| BssT1I | CCWWGG | 1 cut(s) | 401 |
| BstC8I | GCNNGC | 2 cut(s) | 54, 87 |
| BstDEI | CTNAG | 3 cut(s) | 101, 393, 441 |
| BstEII | GGTNACC | 1 cut(s) | 329 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 1 cut(s) | 304 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstPI | GGTNACC | 1 cut(s) | 329 |
| BstSFI | CTRYAG | 1 cut(s) | 45 |
| BstV1I | GCAGC | 2 cut(s) | 271, 384 |
| BtsI | GCAGTG | 1 cut(s) | 54 |
| BtsIMutI | CAGTG | 2 cut(s) | 54, 109 |
| Cac8I | GCNNGC | 2 cut(s) | 54, 87 |
| Cfr10I | RCCGGY | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 1 cut(s) | 294 |
| CviAII | CATG | 2 cut(s) | 133, 360 |
| CviJI | RGCY | 5 cut(s) | 56, 85, 209, 397, 430 |
| CviKI_1 | RGCY | 5 cut(s) | 56, 85, 209, 397, 430 |
| DdeI | CTNAG | 3 cut(s) | 101, 393, 441 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eco130I | CCWWGG | 1 cut(s) | 401 |
| Eco47I | GGWCC | 1 cut(s) | 294 |
| Eco91I | GGTNACC | 1 cut(s) | 329 |
| EcoO65I | GGTNACC | 1 cut(s) | 329 |
| EcoT14I | CCWWGG | 1 cut(s) | 401 |
| ErhI | CCWWGG | 1 cut(s) | 401 |
| FaeI | CATG | 2 cut(s) | 136, 363 |
| FaiI | YATR | 6 cut(s) | 134, 212, 327, 338, 357, 361 |
| FatI | CATG | 2 cut(s) | 132, 359 |
| Fnu4HI | GCNGC | 2 cut(s) | 260, 398 |
| Fsp4HI | GCNGC | 2 cut(s) | 260, 398 |
| FspBI | CTAG | 2 cut(s) | 206, 272 |
| GluI | GCNGC | 2 cut(s) | 260, 398 |
| GsuI | CTGGAG | 1 cut(s) | 170 |
| HapII | CCGG | 2 cut(s) | 86, 297 |
| Hin1II | CATG | 2 cut(s) | 136, 363 |
| HinfI | GANTC | 2 cut(s) | 41, 389 |
| HpaII | CCGG | 2 cut(s) | 86, 297 |
| HphI | GGTGA | 1 cut(s) | 323 |
| Hpy166II | GTNNAC | 2 cut(s) | 203, 302 |
| Hpy188I | TCNGA | 1 cut(s) | 78 |
| Hpy188III | TCNNGA | 3 cut(s) | 149, 184, 272 |
| Hpy8I | GTNNAC | 2 cut(s) | 203, 302 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 52 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HpyF3I | CTNAG | 3 cut(s) | 101, 393, 441 |
| Hsp92II | CATG | 2 cut(s) | 136, 363 |
| KroI | GCCGGC | 1 cut(s) | 85 |
| KroNI | GCCGGC | 1 cut(s) | 87 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LpnPI | CCDG | 4 cut(s) | 99, 134, 183, 310 |
| Lsp1109I | GCAGC | 2 cut(s) | 271, 384 |
| MaeI | CTAG | 2 cut(s) | 206, 272 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 2 cut(s) | 91, 134 |
| MluCI | AATT | 3 cut(s) | 19, 166, 251 |
| MnlI | CCTC | 4 cut(s) | 105, 231, 249, 379 |
| MroNI | GCCGGC | 1 cut(s) | 85 |
| MseI | TTAA | 1 cut(s) | 33 |
| MspA1I | CMGCKG | 1 cut(s) | 397 |
| MspI | CCGG | 2 cut(s) | 86, 297 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NaeI | GCCGGC | 1 cut(s) | 87 |
| NdeII | GATC | 1 cut(s) | 268 |
| NgoMIV | GCCGGC | 1 cut(s) | 85 |
| NlaIII | CATG | 2 cut(s) | 136, 363 |
| NlaIV | GGNNCC | 2 cut(s) | 242, 295 |
| NmuCI | GTSAC | 1 cut(s) | 329 |
| PdiI | GCCGGC | 1 cut(s) | 87 |
| PfeI | GAWTC | 2 cut(s) | 41, 389 |
| PkrI | GCNGC | 2 cut(s) | 261, 399 |
| PshBI | ATTAAT | 1 cut(s) | 33 |
| PspEI | GGTNACC | 1 cut(s) | 329 |
| PspN4I | GGNNCC | 2 cut(s) | 242, 295 |
| PspPI | GGNCC | 1 cut(s) | 294 |
| PstI | CTGCAG | 1 cut(s) | 49 |
| PvuII | CAGCTG | 1 cut(s) | 397 |
| SaqAI | TTAA | 1 cut(s) | 33 |
| SatI | GCNGC | 2 cut(s) | 260, 398 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| Sau96I | GGNCC | 1 cut(s) | 294 |
| SetI | ASST | 6 cut(s) | 9, 58, 211, 242, 399, 432 |
| SfcI | CTRYAG | 1 cut(s) | 45 |
| SinI | GGWCC | 1 cut(s) | 294 |
| SmlI | CTYRAG | 1 cut(s) | 235 |
| SmoI | CTYRAG | 1 cut(s) | 235 |
| Sse9I | AATT | 3 cut(s) | 19, 166, 251 |
| SspI | AATATT | 1 cut(s) | 162 |
| SspMI | CTAG | 2 cut(s) | 206, 272 |
| StyI | CCWWGG | 1 cut(s) | 401 |
| TaqI | TCGA | 2 cut(s) | 185, 248 |
| TasI | AATT | 3 cut(s) | 19, 166, 251 |
| TfiI | GAWTC | 2 cut(s) | 41, 389 |
| Tru1I | TTAA | 1 cut(s) | 33 |
| Tru9I | TTAA | 1 cut(s) | 33 |
| TscAI | CASTG | 2 cut(s) | 54, 109 |
| TseFI | GTSAC | 1 cut(s) | 329 |
| TseI | GCWGC | 2 cut(s) | 259, 397 |
| Tsp45I | GTSAC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 2 cut(s) | 62, 149 |
| TspGWI | ACGGA | 1 cut(s) | 296 |
| TspRI | CASTG | 2 cut(s) | 54, 109 |
| VpaK11BI | GGWCC | 1 cut(s) | 294 |
| VspI | ATTAAT | 1 cut(s) | 33 |
| XbaI | TCTAGA | 1 cut(s) | 271 |
| XspI | CTAG | 2 cut(s) | 206, 272 |