ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 309 |
| AccIII | TCCGGA | 1 cut(s) | 52 |
| AclWI | GGATC | 1 cut(s) | 81 |
| AcsI | RAATTY | 2 cut(s) | 213, 303 |
| AcuI | CTGAAG | 2 cut(s) | 335, 351 |
| AluBI | AGCT | 3 cut(s) | 31, 137, 249 |
| AluI | AGCT | 3 cut(s) | 31, 137, 249 |
| Alw26I | GTCTC | 1 cut(s) | 2 |
| AlwI | GGATC | 1 cut(s) | 81 |
| Aor13HI | TCCGGA | 1 cut(s) | 52 |
| ApeKI | GCWGC | 1 cut(s) | 100 |
| ApoI | RAATTY | 2 cut(s) | 213, 303 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 348 |
| BbvI | GCAGC | 1 cut(s) | 87 |
| BccI | CCATC | 3 cut(s) | 76, 260, 320 |
| BcoDI | GTCTC | 1 cut(s) | 2 |
| BisI | GCNGC | 1 cut(s) | 101 |
| BlsI | GCNGC | 1 cut(s) | 102 |
| Bpu10I | CCTNAGC | 1 cut(s) | 138 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BsaWI | WCCGGW | 1 cut(s) | 52 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 17, 20, 47, 50, 104, 134 |
| Bse1I | ACTGG | 1 cut(s) | 178 |
| BseAI | TCCGGA | 1 cut(s) | 52 |
| BseNI | ACTGG | 1 cut(s) | 178 |
| BseRI | GAGGAG | 2 cut(s) | 41, 125 |
| BseXI | GCAGC | 1 cut(s) | 87 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 2 |
| Bsp13I | TCCGGA | 1 cut(s) | 52 |
| Bsp143I | GATC | 2 cut(s) | 73, 163 |
| BspEI | TCCGGA | 1 cut(s) | 52 |
| BspPI | GGATC | 1 cut(s) | 81 |
| BsrI | ACTGG | 1 cut(s) | 178 |
| BssMI | GATC | 2 cut(s) | 73, 163 |
| Bst4CI | ACNGT | 2 cut(s) | 21, 280 |
| Bst6I | CTCTTC | 2 cut(s) | 354, 372 |
| BstC8I | GCNNGC | 1 cut(s) | 135 |
| BstDEI | CTNAG | 1 cut(s) | 138 |
| BstKTI | GATC | 2 cut(s) | 76, 166 |
| BstMAI | GTCTC | 1 cut(s) | 2 |
| BstMBI | GATC | 2 cut(s) | 73, 163 |
| BstV1I | GCAGC | 1 cut(s) | 87 |
| BtsIMutI | CAGTG | 1 cut(s) | 51 |
| Cac8I | GCNNGC | 1 cut(s) | 135 |
| CviAII | CATG | 1 cut(s) | 147 |
| CviJI | RGCY | 8 cut(s) | 31, 100, 137, 151, 194, 249, 335, 356 |
| CviKI_1 | RGCY | 8 cut(s) | 31, 100, 137, 151, 194, 249, 335, 356 |
| DdeI | CTNAG | 1 cut(s) | 138 |
| DpnI | GATC | 2 cut(s) | 75, 165 |
| DpnII | GATC | 2 cut(s) | 73, 163 |
| Eam1104I | CTCTTC | 2 cut(s) | 354, 372 |
| EarI | CTCTTC | 2 cut(s) | 354, 372 |
| Eco57I | CTGAAG | 2 cut(s) | 335, 351 |
| FaeI | CATG | 1 cut(s) | 150 |
| FaiI | YATR | 6 cut(s) | 41, 148, 234, 309, 397, 408 |
| FatI | CATG | 1 cut(s) | 146 |
| Fnu4HI | GCNGC | 1 cut(s) | 101 |
| Fsp4HI | GCNGC | 1 cut(s) | 101 |
| GluI | GCNGC | 1 cut(s) | 101 |
| HapII | CCGG | 1 cut(s) | 53 |
| Hin1II | CATG | 1 cut(s) | 150 |
| HinfI | GANTC | 3 cut(s) | 10, 49, 127 |
| HpaII | CCGG | 1 cut(s) | 53 |
| Hpy166II | GTNNAC | 2 cut(s) | 17, 289 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 109 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 272 |
| Hpy8I | GTNNAC | 2 cut(s) | 17, 289 |
| HpyAV | CCTTC | 1 cut(s) | 375 |
| HpyCH4III | ACNGT | 2 cut(s) | 21, 280 |
| HpyF3I | CTNAG | 1 cut(s) | 138 |
| Hsp92II | CATG | 1 cut(s) | 150 |
| Kpn2I | TCCGGA | 1 cut(s) | 52 |
| Kzo9I | GATC | 2 cut(s) | 73, 163 |
| LmnI | GCTCC | 2 cut(s) | 28, 246 |
| LpnPI | CCDG | 7 cut(s) | 66, 159, 228, 235, 257, 300, 338 |
| Lsp1109I | GCAGC | 1 cut(s) | 87 |
| MaeIII | GTNAC | 2 cut(s) | 46, 370 |
| MalI | GATC | 2 cut(s) | 75, 165 |
| MboI | GATC | 2 cut(s) | 73, 163 |
| MboII | GAAGA | 2 cut(s) | 341, 389 |
| MluCI | AATT | 3 cut(s) | 116, 213, 303 |
| MlyI | GAGTC | 3 cut(s) | 4, 43, 136 |
| MnlI | CCTC | 8 cut(s) | 19, 49, 63, 103, 151, 218, 232, 334 |
| MroI | TCCGGA | 1 cut(s) | 52 |
| MroXI | GAANNNNTTC | 1 cut(s) | 348 |
| MspI | CCGG | 1 cut(s) | 53 |
| NdeII | GATC | 2 cut(s) | 73, 163 |
| NlaIII | CATG | 1 cut(s) | 150 |
| NmuCI | GTSAC | 1 cut(s) | 46 |
| PdmI | GAANNNNTTC | 1 cut(s) | 348 |
| PkrI | GCNGC | 1 cut(s) | 102 |
| PleI | GAGTC | 3 cut(s) | 4, 43, 135 |
| PpsI | GAGTC | 3 cut(s) | 4, 43, 135 |
| PsiI | TTATAA | 1 cut(s) | 309 |
| SatI | GCNGC | 1 cut(s) | 101 |
| Sau3AI | GATC | 2 cut(s) | 73, 163 |
| SchI | GAGTC | 3 cut(s) | 4, 43, 136 |
| SetI | ASST | 6 cut(s) | 33, 60, 139, 144, 229, 251 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| Sse9I | AATT | 3 cut(s) | 116, 213, 303 |
| TaaI | ACNGT | 2 cut(s) | 21, 280 |
| TasI | AATT | 3 cut(s) | 116, 213, 303 |
| TscAI | CASTG | 1 cut(s) | 51 |
| TseFI | GTSAC | 1 cut(s) | 46 |
| TseI | GCWGC | 1 cut(s) | 100 |
| Tsp45I | GTSAC | 1 cut(s) | 46 |
| TspDTI | ATGAA | 4 cut(s) | 135, 173, 208, 398 |
| TspRI | CASTG | 1 cut(s) | 51 |
| XapI | RAATTY | 2 cut(s) | 213, 303 |
| XmnI | GAANNNNTTC | 1 cut(s) | 348 |