ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 28 |
| AccIII | TCCGGA | 1 cut(s) | 274 |
| AciI | CCGC | 2 cut(s) | 17, 209 |
| AfaI | GTAC | 2 cut(s) | 131, 344 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 88 |
| AgsI | TTSAA | 2 cut(s) | 52, 338 |
| AluBI | AGCT | 1 cut(s) | 220 |
| AluI | AGCT | 1 cut(s) | 220 |
| Aor13HI | TCCGGA | 1 cut(s) | 274 |
| AoxI | GGCC | 1 cut(s) | 210 |
| AsuHPI | GGTGA | 2 cut(s) | 52, 280 |
| BaeGI | GKGCMC | 1 cut(s) | 301 |
| BisI | GCNGC | 2 cut(s) | 18, 210 |
| BlsI | GCNGC | 2 cut(s) | 19, 211 |
| BmsI | GCATC | 3 cut(s) | 101, 241, 316 |
| BsaJI | CCNNGG | 2 cut(s) | 234, 264 |
| BsaWI | WCCGGW | 1 cut(s) | 274 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 88 |
| BseAI | TCCGGA | 1 cut(s) | 274 |
| BseDI | CCNNGG | 2 cut(s) | 234, 264 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 88 |
| BseMII | CTCAG | 1 cut(s) | 228 |
| BseRI | GAGGAG | 3 cut(s) | 50, 118, 329 |
| BseSI | GKGCMC | 1 cut(s) | 301 |
| BshFI | GGCC | 1 cut(s) | 212 |
| BsiSI | CCGG | 1 cut(s) | 275 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 88 |
| BsnI | GGCC | 1 cut(s) | 212 |
| Bsp1286I | GDGCHC | 1 cut(s) | 301 |
| Bsp13I | TCCGGA | 1 cut(s) | 274 |
| Bsp19I | CCATGG | 1 cut(s) | 234 |
| BspACI | CCGC | 2 cut(s) | 17, 209 |
| BspANI | GGCC | 1 cut(s) | 212 |
| BspCNI | CTCAG | 1 cut(s) | 227 |
| BspEI | TCCGGA | 1 cut(s) | 274 |
| BssECI | CCNNGG | 2 cut(s) | 234, 264 |
| BssT1I | CCWWGG | 1 cut(s) | 234 |
| BstDEI | CTNAG | 2 cut(s) | 198, 214 |
| BstDSI | CCRYGG | 1 cut(s) | 234 |
| BstSLI | GKGCMC | 1 cut(s) | 301 |
| BsuRI | GGCC | 1 cut(s) | 212 |
| BtgI | CCRYGG | 1 cut(s) | 234 |
| BtgZI | GCGATG | 1 cut(s) | 168 |
| Csp6I | GTAC | 2 cut(s) | 130, 343 |
| CviAII | CATG | 2 cut(s) | 186, 235 |
| CviJI | RGCY | 4 cut(s) | 75, 212, 220, 233 |
| CviKI_1 | RGCY | 4 cut(s) | 75, 212, 220, 233 |
| CviQI | GTAC | 2 cut(s) | 130, 343 |
| DdeI | CTNAG | 2 cut(s) | 198, 214 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 28 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 28 |
| Eco130I | CCWWGG | 1 cut(s) | 234 |
| EcoT14I | CCWWGG | 1 cut(s) | 234 |
| ErhI | CCWWGG | 1 cut(s) | 234 |
| FaeI | CATG | 2 cut(s) | 189, 238 |
| FaiI | YATR | 5 cut(s) | 187, 228, 236, 257, 281 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 315, 347 |
| FatI | CATG | 2 cut(s) | 185, 234 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 210 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 210 |
| GluI | GCNGC | 2 cut(s) | 18, 210 |
| HaeIII | GGCC | 1 cut(s) | 212 |
| HapII | CCGG | 1 cut(s) | 275 |
| Hin1II | CATG | 2 cut(s) | 189, 238 |
| HinfI | GANTC | 2 cut(s) | 161, 271 |
| HpaII | CCGG | 1 cut(s) | 275 |
| HphI | GGTGA | 2 cut(s) | 52, 280 |
| Hpy188I | TCNGA | 4 cut(s) | 8, 34, 120, 217 |
| Hpy188III | TCNNGA | 3 cut(s) | 82, 165, 275 |
| HpyAV | CCTTC | 2 cut(s) | 46, 82 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 214 |
| Hsp92II | CATG | 2 cut(s) | 189, 238 |
| Kpn2I | TCCGGA | 1 cut(s) | 274 |
| LmnI | GCTCC | 1 cut(s) | 9 |
| LpnPI | CCDG | 5 cut(s) | 95, 133, 150, 206, 288 |
| LweI | GCATC | 3 cut(s) | 101, 241, 316 |
| MaeIII | GTNAC | 2 cut(s) | 40, 268 |
| MboII | GAAGA | 1 cut(s) | 70 |
| MhlI | GDGCHC | 1 cut(s) | 301 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MnlI | CCTC | 9 cut(s) | 28, 31, 49, 78, 96, 223, 274, 307, 310 |
| MroI | TCCGGA | 1 cut(s) | 274 |
| MspI | CCGG | 1 cut(s) | 275 |
| NcoI | CCATGG | 1 cut(s) | 234 |
| NlaIII | CATG | 2 cut(s) | 189, 238 |
| NmuCI | GTSAC | 2 cut(s) | 40, 268 |
| PfeI | GAWTC | 1 cut(s) | 161 |
| PkrI | GCNGC | 2 cut(s) | 19, 211 |
| PleI | GAGTC | 1 cut(s) | 265 |
| PpsI | GAGTC | 1 cut(s) | 265 |
| RsaI | GTAC | 2 cut(s) | 131, 344 |
| RsaNI | GTAC | 2 cut(s) | 130, 343 |
| SatI | GCNGC | 2 cut(s) | 18, 210 |
| SchI | GAGTC | 1 cut(s) | 265 |
| SduI | GDGCHC | 1 cut(s) | 301 |
| SetI | ASST | 3 cut(s) | 42, 222, 321 |
| SfaNI | GCATC | 3 cut(s) | 101, 241, 316 |
| SsiI | CCGC | 2 cut(s) | 17, 209 |
| StyI | CCWWGG | 1 cut(s) | 234 |
| TauI | GCSGC | 2 cut(s) | 20, 212 |
| TfiI | GAWTC | 1 cut(s) | 161 |
| TseFI | GTSAC | 2 cut(s) | 40, 268 |
| Tsp45I | GTSAC | 2 cut(s) | 40, 268 |
| TspDTI | ATGAA | 1 cut(s) | 243 |