Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 9 cut(s) | 330, 333, 351, 372, 381, 384, 387, 411, 420 |
| AclWI | GGATC | 1 cut(s) | 94 |
| AleI | CACNNNNGTG | 1 cut(s) | 351 |
| AlwI | GGATC | 1 cut(s) | 94 |
| AoxI | GGCC | 1 cut(s) | 190 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| AspS9I | GGNCC | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 3 cut(s) | 38, 158, 302 |
| AvaII | GGWCC | 1 cut(s) | 242 |
| BbvI | GCAGC | 1 cut(s) | 4 |
| BccI | CCATC | 2 cut(s) | 287, 359 |
| BclI | TGATCA | 1 cut(s) | 37 |
| BfaI | CTAG | 2 cut(s) | 6, 282 |
| BfmI | CTRYAG | 1 cut(s) | 21 |
| BisI | GCNGC | 4 cut(s) | 18, 331, 382, 385 |
| BlsI | GCNGC | 4 cut(s) | 19, 332, 383, 386 |
| Bme18I | GGWCC | 1 cut(s) | 242 |
| BmgT120I | GGNCC | 1 cut(s) | 242 |
| BmiI | GGNNCC | 1 cut(s) | 243 |
| BpmI | CTGGAG | 1 cut(s) | 93 |
| Bse1I | ACTGG | 2 cut(s) | 223, 262 |
| BseMII | CTCAG | 1 cut(s) | 129 |
| BseNI | ACTGG | 2 cut(s) | 223, 262 |
| BseXI | GCAGC | 1 cut(s) | 4 |
| BshFI | GGCC | 1 cut(s) | 192 |
| BslFI | GGGAC | 1 cut(s) | 94 |
| BsmFI | GGGAC | 1 cut(s) | 94 |
| BsnI | GGCC | 1 cut(s) | 192 |
| Bsp143I | GATC | 2 cut(s) | 37, 99 |
| BspACI | CCGC | 9 cut(s) | 330, 333, 351, 372, 381, 384, 387, 411, 420 |
| BspANI | GGCC | 1 cut(s) | 192 |
| BspCNI | CTCAG | 1 cut(s) | 128 |
| BspLI | GGNNCC | 1 cut(s) | 243 |
| BspPI | GGATC | 1 cut(s) | 94 |
| BsrI | ACTGG | 2 cut(s) | 223, 262 |
| BssMI | GATC | 2 cut(s) | 37, 99 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 17 |
| BstDEI | CTNAG | 1 cut(s) | 115 |
| BstKTI | GATC | 2 cut(s) | 40, 102 |
| BstMBI | GATC | 2 cut(s) | 37, 99 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 378, 417 |
| BstSFI | CTRYAG | 1 cut(s) | 21 |
| BstV1I | GCAGC | 1 cut(s) | 4 |
| BsuRI | GGCC | 1 cut(s) | 192 |
| BtsI | GCAGTG | 1 cut(s) | 276 |
| BtsIMutI | CAGTG | 1 cut(s) | 276 |
| Cfr13I | GGNCC | 1 cut(s) | 242 |
| CviAII | CATG | 5 cut(s) | 41, 94, 305, 311, 320 |
| CviJI | RGCY | 2 cut(s) | 5, 192 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 192 |
| DdeI | CTNAG | 1 cut(s) | 115 |
| DpnI | GATC | 2 cut(s) | 39, 101 |
| DpnII | GATC | 2 cut(s) | 37, 99 |
| Eco47I | GGWCC | 1 cut(s) | 242 |
| EcoO109I | RGGNCCY | 1 cut(s) | 242 |
| FaeI | CATG | 5 cut(s) | 44, 97, 308, 314, 323 |
| FaiI | YATR | 8 cut(s) | 42, 95, 122, 237, 267, 306, 312, 321 |
| FaqI | GGGAC | 1 cut(s) | 94 |
| FatI | CATG | 5 cut(s) | 40, 93, 304, 310, 319 |
| FauI | CCCGC | 1 cut(s) | 365 |
| FbaI | TGATCA | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 4 cut(s) | 18, 331, 382, 385 |
| Fsp4HI | GCNGC | 4 cut(s) | 18, 331, 382, 385 |
| FspBI | CTAG | 2 cut(s) | 6, 282 |
| GluI | GCNGC | 4 cut(s) | 18, 331, 382, 385 |
| GsuI | CTGGAG | 1 cut(s) | 93 |
| HaeIII | GGCC | 1 cut(s) | 192 |
| Hin1II | CATG | 5 cut(s) | 44, 97, 308, 314, 323 |
| HinfI | GANTC | 1 cut(s) | 149 |
| HphI | GGTGA | 3 cut(s) | 38, 158, 302 |
| Hpy166II | GTNNAC | 1 cut(s) | 302 |
| Hpy188III | TCNNGA | 1 cut(s) | 72 |
| Hpy8I | GTNNAC | 1 cut(s) | 302 |
| HpyCH4V | TGCA | 1 cut(s) | 93 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 378, 417 |
| HpyF3I | CTNAG | 1 cut(s) | 115 |
| Hsp92II | CATG | 5 cut(s) | 44, 97, 308, 314, 323 |
| Ksp22I | TGATCA | 1 cut(s) | 37 |
| Kzo9I | GATC | 2 cut(s) | 37, 99 |
| LpnPI | CCDG | 5 cut(s) | 57, 141, 204, 243, 258 |
| Lsp1109I | GCAGC | 1 cut(s) | 4 |
| MaeI | CTAG | 2 cut(s) | 6, 282 |
| MalI | GATC | 2 cut(s) | 39, 101 |
| MboI | GATC | 2 cut(s) | 37, 99 |
| MboII | GAAGA | 2 cut(s) | 76, 175 |
| MfeI | CAATTG | 1 cut(s) | 12 |
| MluCI | AATT | 2 cut(s) | 12, 433 |
| MnlI | CCTC | 8 cut(s) | 68, 98, 122, 163, 203, 290, 320, 335 |
| MseI | TTAA | 1 cut(s) | 436 |
| MslI | CAYNNNNRTG | 3 cut(s) | 45, 309, 351 |
| MspA1I | CMGCKG | 1 cut(s) | 351 |
| MunI | CAATTG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 378, 417 |
| NdeII | GATC | 2 cut(s) | 37, 99 |
| NlaIII | CATG | 5 cut(s) | 44, 97, 308, 314, 323 |
| NlaIV | GGNNCC | 1 cut(s) | 243 |
| OliI | CACNNNNGTG | 1 cut(s) | 351 |
| PfeI | GAWTC | 1 cut(s) | 149 |
| PkrI | GCNGC | 4 cut(s) | 19, 332, 383, 386 |
| PpuMI | RGGWCCY | 1 cut(s) | 242 |
| Psp5II | RGGWCCY | 1 cut(s) | 242 |
| PspN4I | GGNNCC | 1 cut(s) | 243 |
| PspPI | GGNCC | 1 cut(s) | 242 |
| PspPPI | RGGWCCY | 1 cut(s) | 242 |
| RseI | CAYNNNNRTG | 3 cut(s) | 45, 309, 351 |
| SaqAI | TTAA | 1 cut(s) | 436 |
| SatI | GCNGC | 4 cut(s) | 18, 331, 382, 385 |
| Sau3AI | GATC | 2 cut(s) | 37, 99 |
| Sau96I | GGNCC | 1 cut(s) | 242 |
| SetI | ASST | 4 cut(s) | 28, 49, 79, 301 |
| SfcI | CTRYAG | 1 cut(s) | 21 |
| SinI | GGWCC | 1 cut(s) | 242 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 45, 309, 351 |
| Sse9I | AATT | 2 cut(s) | 12, 433 |
| SsiI | CCGC | 9 cut(s) | 330, 333, 351, 372, 381, 384, 387, 411, 420 |
| SspI | AATATT | 1 cut(s) | 184 |
| SspMI | CTAG | 2 cut(s) | 6, 282 |
| TaqI | TCGA | 1 cut(s) | 195 |
| TasI | AATT | 2 cut(s) | 12, 433 |
| TauI | GCSGC | 3 cut(s) | 333, 384, 387 |
| TfiI | GAWTC | 1 cut(s) | 149 |
| Tru1I | TTAA | 1 cut(s) | 436 |
| Tru9I | TTAA | 1 cut(s) | 436 |
| TscAI | CASTG | 1 cut(s) | 283 |
| TseI | GCWGC | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 1 cut(s) | 242 |
| XspI | CTAG | 2 cut(s) | 6, 282 |