ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 214 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 174 |
| AclWI | GGATC | 1 cut(s) | 237 |
| AcsI | RAATTY | 1 cut(s) | 208 |
| AcyI | GRCGYC | 1 cut(s) | 289 |
| AfaI | GTAC | 1 cut(s) | 396 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 174, 224, 225, 332 |
| AgsI | TTSAA | 2 cut(s) | 207, 305 |
| AjnI | CCWGG | 1 cut(s) | 119 |
| AluBI | AGCT | 1 cut(s) | 309 |
| AluI | AGCT | 1 cut(s) | 309 |
| AlwI | GGATC | 1 cut(s) | 237 |
| AoxI | GGCC | 1 cut(s) | 283 |
| ApeKI | GCWGC | 1 cut(s) | 52 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| AspS9I | GGNCC | 1 cut(s) | 283 |
| AsuC2I | CCSGG | 1 cut(s) | 326 |
| AsuHPI | GGTGA | 2 cut(s) | 109, 314 |
| BanI | GGYRCC | 1 cut(s) | 214 |
| BbvI | GCAGC | 1 cut(s) | 64 |
| BccI | CCATC | 1 cut(s) | 384 |
| BciT130I | CCWGG | 1 cut(s) | 121 |
| BclI | TGATCA | 1 cut(s) | 319 |
| BcnI | CCSGG | 1 cut(s) | 326 |
| BfaI | CTAG | 3 cut(s) | 104, 198, 414 |
| BisI | GCNGC | 1 cut(s) | 53 |
| BlsI | GCNGC | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 2 cut(s) | 121, 326 |
| BmgT120I | GGNCC | 1 cut(s) | 283 |
| BmiI | GGNNCC | 3 cut(s) | 109, 216, 284 |
| BmrFI | CCNGG | 2 cut(s) | 121, 326 |
| BmsI | GCATC | 1 cut(s) | 55 |
| BpmI | CTGGAG | 1 cut(s) | 30 |
| BpuMI | CCSGG | 1 cut(s) | 326 |
| BsaHI | GRCGYC | 1 cut(s) | 289 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 15, 28, 45, 58 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 174, 224, 225, 332 |
| Bse118I | RCCGGY | 1 cut(s) | 285 |
| Bse3DI | GCAATG | 1 cut(s) | 345 |
| BseBI | CCWGG | 1 cut(s) | 121 |
| BseGI | GGATG | 2 cut(s) | 70, 376 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 174, 224, 225, 332 |
| BseMI | GCAATG | 1 cut(s) | 345 |
| BseMII | CTCAG | 1 cut(s) | 276 |
| BseXI | GCAGC | 1 cut(s) | 64 |
| BsgI | GTGCAG | 1 cut(s) | 163 |
| BshFI | GGCC | 1 cut(s) | 285 |
| BshNI | GGYRCC | 1 cut(s) | 214 |
| BsiSI | CCGG | 2 cut(s) | 286, 326 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 174, 224, 225, 332 |
| BsnI | GGCC | 1 cut(s) | 285 |
| Bsp143I | GATC | 4 cut(s) | 82, 229, 319, 359 |
| BspANI | GGCC | 1 cut(s) | 285 |
| BspCNI | CTCAG | 1 cut(s) | 275 |
| BspLI | GGNNCC | 3 cut(s) | 109, 216, 284 |
| BspPI | GGATC | 1 cut(s) | 237 |
| BspT107I | GGYRCC | 1 cut(s) | 214 |
| BsrDI | GCAATG | 1 cut(s) | 345 |
| BsrFI | RCCGGY | 1 cut(s) | 285 |
| BssAI | RCCGGY | 1 cut(s) | 285 |
| BssMI | GATC | 4 cut(s) | 82, 229, 319, 359 |
| BssNI | GRCGYC | 1 cut(s) | 289 |
| Bst2UI | CCWGG | 1 cut(s) | 121 |
| Bst4CI | ACNGT | 3 cut(s) | 80, 193, 277 |
| BstACI | GRCGYC | 1 cut(s) | 289 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 287 |
| BstDEI | CTNAG | 1 cut(s) | 262 |
| BstF5I | GGATG | 2 cut(s) | 70, 376 |
| BstKTI | GATC | 4 cut(s) | 85, 232, 322, 362 |
| BstMBI | GATC | 4 cut(s) | 82, 229, 319, 359 |
| BstNI | CCWGG | 1 cut(s) | 121 |
| BstNSI | RCATGY | 1 cut(s) | 8 |
| BstSCI | CCNGG | 2 cut(s) | 119, 324 |
| BstV1I | GCAGC | 1 cut(s) | 64 |
| BsuRI | GGCC | 1 cut(s) | 285 |
| BtgZI | GCGATG | 1 cut(s) | 269 |
| BtsCI | GGATG | 2 cut(s) | 70, 376 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 287 |
| Cfr10I | RCCGGY | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 1 cut(s) | 283 |
| CseI | GACGC | 1 cut(s) | 278 |
| Csp6I | GTAC | 1 cut(s) | 395 |
| CviAII | CATG | 2 cut(s) | 5, 224 |
| CviJI | RGCY | 5 cut(s) | 55, 197, 285, 309, 375 |
| CviKI_1 | RGCY | 5 cut(s) | 55, 197, 285, 309, 375 |
| CviQI | GTAC | 1 cut(s) | 395 |
| DdeI | CTNAG | 1 cut(s) | 262 |
| DpnI | GATC | 4 cut(s) | 84, 231, 321, 361 |
| DpnII | GATC | 4 cut(s) | 82, 229, 319, 359 |
| EcoRII | CCWGG | 1 cut(s) | 119 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 70 |
| FaeI | CATG | 2 cut(s) | 8, 227 |
| FaiI | YATR | 4 cut(s) | 6, 225, 234, 383 |
| FatI | CATG | 2 cut(s) | 4, 223 |
| FbaI | TGATCA | 1 cut(s) | 319 |
| Fnu4HI | GCNGC | 1 cut(s) | 53 |
| FokI | GGATG | 2 cut(s) | 77, 363 |
| Fsp4HI | GCNGC | 1 cut(s) | 53 |
| FspBI | CTAG | 3 cut(s) | 104, 198, 414 |
| GluI | GCNGC | 1 cut(s) | 53 |
| GsuI | CTGGAG | 1 cut(s) | 30 |
| HaeIII | GGCC | 1 cut(s) | 285 |
| HapII | CCGG | 2 cut(s) | 286, 326 |
| HgaI | GACGC | 1 cut(s) | 278 |
| Hin1I | GRCGYC | 1 cut(s) | 289 |
| Hin1II | CATG | 2 cut(s) | 8, 227 |
| HindIII | AAGCTT | 1 cut(s) | 307 |
| HinfI | GANTC | 1 cut(s) | 43 |
| HpaII | CCGG | 2 cut(s) | 286, 326 |
| HphI | GGTGA | 2 cut(s) | 109, 314 |
| Hpy188I | TCNGA | 2 cut(s) | 349, 364 |
| Hpy188III | TCNNGA | 2 cut(s) | 21, 406 |
| Hpy99I | CGWCG | 1 cut(s) | 294 |
| HpyAV | CCTTC | 1 cut(s) | 344 |
| HpyCH4III | ACNGT | 3 cut(s) | 80, 193, 277 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 52, 68, 144 |
| HpyF3I | CTNAG | 1 cut(s) | 262 |
| Hsp92I | GRCGYC | 1 cut(s) | 289 |
| Hsp92II | CATG | 2 cut(s) | 8, 227 |
| KroI | GCCGGC | 1 cut(s) | 285 |
| KroNI | GCCGGC | 1 cut(s) | 287 |
| Ksp22I | TGATCA | 1 cut(s) | 319 |
| Kzo9I | GATC | 4 cut(s) | 82, 229, 319, 359 |
| LpnPI | CCDG | 9 cut(s) | 6, 46, 106, 110, 133, 298, 299, 339, 385 |
| Lsp1109I | GCAGC | 1 cut(s) | 64 |
| LweI | GCATC | 1 cut(s) | 55 |
| MaeI | CTAG | 3 cut(s) | 104, 198, 414 |
| MalI | GATC | 4 cut(s) | 84, 231, 321, 361 |
| MboI | GATC | 4 cut(s) | 82, 229, 319, 359 |
| MluCI | AATT | 1 cut(s) | 208 |
| MlyI | GAGTC | 1 cut(s) | 52 |
| MmeI | TCCRAC | 1 cut(s) | 335 |
| MnlI | CCTC | 5 cut(s) | 17, 132, 175, 181, 271 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 70 |
| MroNI | GCCGGC | 1 cut(s) | 285 |
| MseI | TTAA | 1 cut(s) | 297 |
| MspI | CCGG | 2 cut(s) | 286, 326 |
| MspR9I | CCNGG | 2 cut(s) | 121, 326 |
| MvaI | CCWGG | 1 cut(s) | 121 |
| NaeI | GCCGGC | 1 cut(s) | 287 |
| NciI | CCSGG | 1 cut(s) | 326 |
| NdeII | GATC | 4 cut(s) | 82, 229, 319, 359 |
| NgoMIV | GCCGGC | 1 cut(s) | 285 |
| NlaIII | CATG | 2 cut(s) | 8, 227 |
| NlaIV | GGNNCC | 3 cut(s) | 109, 216, 284 |
| NsiI | ATGCAT | 2 cut(s) | 6, 70 |
| NspI | RCATGY | 1 cut(s) | 8 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 286 |
| PdiI | GCCGGC | 1 cut(s) | 287 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 174 |
| PkrI | GCNGC | 1 cut(s) | 54 |
| PleI | GAGTC | 1 cut(s) | 51 |
| PpsI | GAGTC | 1 cut(s) | 51 |
| Psp6I | CCWGG | 1 cut(s) | 119 |
| PspGI | CCWGG | 1 cut(s) | 119 |
| PspN4I | GGNNCC | 3 cut(s) | 109, 216, 284 |
| PspPI | GGNCC | 1 cut(s) | 283 |
| RsaI | GTAC | 1 cut(s) | 396 |
| RsaNI | GTAC | 1 cut(s) | 395 |
| SaqAI | TTAA | 1 cut(s) | 297 |
| SatI | GCNGC | 1 cut(s) | 53 |
| Sau3AI | GATC | 4 cut(s) | 82, 229, 319, 359 |
| Sau96I | GGNCC | 1 cut(s) | 283 |
| SchI | GAGTC | 1 cut(s) | 52 |
| ScrFI | CCNGG | 2 cut(s) | 121, 326 |
| SetI | ASST | 5 cut(s) | 122, 143, 173, 311, 355 |
| SfaNI | GCATC | 1 cut(s) | 55 |
| SphI | GCATGC | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 208 |
| SspMI | CTAG | 3 cut(s) | 104, 198, 414 |
| StyD4I | CCNGG | 2 cut(s) | 119, 324 |
| TaaI | ACNGT | 3 cut(s) | 80, 193, 277 |
| TasI | AATT | 1 cut(s) | 208 |
| TatI | WGTACW | 1 cut(s) | 394 |
| Tru1I | TTAA | 1 cut(s) | 297 |
| Tru9I | TTAA | 1 cut(s) | 297 |
| TscAI | CASTG | 1 cut(s) | 198 |
| TseI | GCWGC | 1 cut(s) | 52 |
| TspDTI | ATGAA | 1 cut(s) | 212 |
| TspRI | CASTG | 1 cut(s) | 198 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 174 |
| XapI | RAATTY | 1 cut(s) | 208 |
| XceI | RCATGY | 1 cut(s) | 8 |
| XspI | CTAG | 3 cut(s) | 104, 198, 414 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 70 |