ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 63 |
| AccIII | TCCGGA | 1 cut(s) | 338 |
| AclWI | GGATC | 1 cut(s) | 23 |
| AcsI | RAATTY | 2 cut(s) | 231, 361 |
| AcyI | GRCGYC | 1 cut(s) | 517 |
| AfaI | GTAC | 5 cut(s) | 471, 493, 595, 696, 869 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 378, 826 |
| AgsI | TTSAA | 2 cut(s) | 226, 623 |
| AjiI | CACGTC | 1 cut(s) | 434 |
| AjnI | CCWGG | 1 cut(s) | 782 |
| AluBI | AGCT | 4 cut(s) | 95, 488, 667, 715 |
| AluI | AGCT | 4 cut(s) | 95, 488, 667, 715 |
| Alw26I | GTCTC | 3 cut(s) | 61, 508, 792 |
| AlwI | GGATC | 1 cut(s) | 23 |
| Aor13HI | TCCGGA | 1 cut(s) | 338 |
| AoxI | GGCC | 1 cut(s) | 780 |
| ApeKI | GCWGC | 2 cut(s) | 667, 712 |
| ApoI | RAATTY | 2 cut(s) | 231, 361 |
| AspA2I | CCTAGG | 1 cut(s) | 104 |
| AspLEI | GCGC | 1 cut(s) | 64 |
| AspS9I | GGNCC | 3 cut(s) | 73, 260, 341 |
| AsuHPI | GGTGA | 3 cut(s) | 46, 572, 603 |
| AvaII | GGWCC | 3 cut(s) | 73, 260, 341 |
| AvrII | CCTAGG | 1 cut(s) | 104 |
| BauI | CACGAG | 1 cut(s) | 294 |
| BbvI | GCAGC | 2 cut(s) | 654, 724 |
| BccI | CCATC | 3 cut(s) | 80, 251, 563 |
| BceAI | ACGGC | 1 cut(s) | 54 |
| BciT130I | CCWGG | 1 cut(s) | 784 |
| BcoDI | GTCTC | 3 cut(s) | 61, 508, 792 |
| BfaI | CTAG | 4 cut(s) | 105, 329, 453, 489 |
| BfmI | CTRYAG | 1 cut(s) | 45 |
| BglII | AGATCT | 1 cut(s) | 770 |
| BisI | GCNGC | 2 cut(s) | 668, 713 |
| BlnI | CCTAGG | 1 cut(s) | 104 |
| BlsI | GCNGC | 2 cut(s) | 669, 714 |
| Bme1390I | CCNGG | 1 cut(s) | 784 |
| Bme18I | GGWCC | 3 cut(s) | 73, 260, 341 |
| BmgBI | CACGTC | 1 cut(s) | 434 |
| BmgT120I | GGNCC | 3 cut(s) | 73, 260, 341 |
| BmiI | GGNNCC | 1 cut(s) | 343 |
| BmrFI | CCNGG | 1 cut(s) | 784 |
| BmrI | ACTGGG | 1 cut(s) | 20 |
| BmsI | GCATC | 3 cut(s) | 73, 289, 574 |
| BmuI | ACTGGG | 1 cut(s) | 20 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 277, 309 |
| BpmI | CTGGAG | 2 cut(s) | 43, 680 |
| Bsa29I | ATCGAT | 1 cut(s) | 84 |
| BsaHI | GRCGYC | 1 cut(s) | 517 |
| BsaI | GGTCTC | 2 cut(s) | 61, 792 |
| BsaJI | CCNNGG | 2 cut(s) | 104, 203 |
| BsaWI | WCCGGW | 3 cut(s) | 338, 801, 822 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 720, 750 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 378, 826 |
| Bse118I | RCCGGY | 1 cut(s) | 809 |
| Bse1I | ACTGG | 2 cut(s) | 15, 663 |
| BseAI | TCCGGA | 1 cut(s) | 338 |
| BseBI | CCWGG | 1 cut(s) | 784 |
| BseCI | ATCGAT | 1 cut(s) | 84 |
| BseDI | CCNNGG | 2 cut(s) | 104, 203 |
| BseGI | GGATG | 1 cut(s) | 919 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 378, 826 |
| BseNI | ACTGG | 2 cut(s) | 15, 663 |
| BseRI | GAGGAG | 1 cut(s) | 677 |
| BseXI | GCAGC | 2 cut(s) | 654, 724 |
| BsgI | GTGCAG | 1 cut(s) | 382 |
| BshFI | GGCC | 1 cut(s) | 782 |
| BshVI | ATCGAT | 1 cut(s) | 84 |
| BsiSI | CCGG | 4 cut(s) | 339, 802, 810, 823 |
| BslFI | GGGAC | 2 cut(s) | 167, 662 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 378, 826 |
| BsmAI | GTCTC | 3 cut(s) | 61, 508, 792 |
| BsmBI | CGTCTC | 1 cut(s) | 508 |
| BsmFI | GGGAC | 2 cut(s) | 167, 662 |
| BsnI | GGCC | 1 cut(s) | 782 |
| Bso31I | GGTCTC | 2 cut(s) | 61, 792 |
| Bsp13I | TCCGGA | 1 cut(s) | 338 |
| Bsp1407I | TGTACA | 2 cut(s) | 694, 867 |
| Bsp143I | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| Bsp19I | CCATGG | 1 cut(s) | 203 |
| BspANI | GGCC | 1 cut(s) | 782 |
| BspDI | ATCGAT | 1 cut(s) | 84 |
| BspEI | TCCGGA | 1 cut(s) | 338 |
| BspLI | GGNNCC | 1 cut(s) | 343 |
| BspPI | GGATC | 1 cut(s) | 23 |
| BspTNI | GGTCTC | 2 cut(s) | 61, 792 |
| BsrFI | RCCGGY | 1 cut(s) | 809 |
| BsrGI | TGTACA | 2 cut(s) | 694, 867 |
| BsrI | ACTGG | 2 cut(s) | 15, 663 |
| BssAI | RCCGGY | 1 cut(s) | 809 |
| BssECI | CCNNGG | 2 cut(s) | 104, 203 |
| BssMI | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| BssNI | GRCGYC | 1 cut(s) | 517 |
| BssSI | CACGAG | 1 cut(s) | 294 |
| BssT1I | CCWWGG | 2 cut(s) | 104, 203 |
| Bst2BI | CACGAG | 1 cut(s) | 294 |
| Bst2UI | CCWGG | 1 cut(s) | 784 |
| Bst4CI | ACNGT | 4 cut(s) | 46, 55, 158, 474 |
| Bst6I | CTCTTC | 2 cut(s) | 506, 744 |
| BstACI | GRCGYC | 1 cut(s) | 517 |
| BstAUI | TGTACA | 2 cut(s) | 694, 867 |
| BstDEI | CTNAG | 2 cut(s) | 377, 927 |
| BstDSI | CCRYGG | 1 cut(s) | 203 |
| BstEII | GGTNACC | 1 cut(s) | 98 |
| BstF5I | GGATG | 1 cut(s) | 919 |
| BstHHI | GCGC | 1 cut(s) | 64 |
| BstKTI | GATC | 5 cut(s) | 18, 190, 272, 328, 773 |
| BstMAI | GTCTC | 3 cut(s) | 61, 508, 792 |
| BstMBI | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 129, 143 |
| BstNI | CCWGG | 1 cut(s) | 784 |
| BstPI | GGTNACC | 1 cut(s) | 98 |
| BstSCI | CCNGG | 1 cut(s) | 782 |
| BstSFI | CTRYAG | 1 cut(s) | 45 |
| BstV1I | GCAGC | 2 cut(s) | 654, 724 |
| BstX2I | RGATCY | 2 cut(s) | 15, 770 |
| BstYI | RGATCY | 2 cut(s) | 15, 770 |
| Bsu15I | ATCGAT | 1 cut(s) | 84 |
| BsuRI | GGCC | 1 cut(s) | 782 |
| BsuTUI | ATCGAT | 1 cut(s) | 84 |
| BtgI | CCRYGG | 1 cut(s) | 203 |
| BtgZI | GCGATG | 1 cut(s) | 42 |
| BtrI | CACGTC | 1 cut(s) | 434 |
| BtsCI | GGATG | 1 cut(s) | 919 |
| BtsI | GCAGTG | 1 cut(s) | 197 |
| BtsIMutI | CAGTG | 2 cut(s) | 197, 372 |
| CfoI | GCGC | 1 cut(s) | 64 |
| Cfr10I | RCCGGY | 1 cut(s) | 809 |
| Cfr13I | GGNCC | 3 cut(s) | 73, 260, 341 |
| ClaI | ATCGAT | 1 cut(s) | 84 |
| CseI | GACGC | 1 cut(s) | 525 |
| Csp6I | GTAC | 5 cut(s) | 470, 492, 594, 695, 868 |
| CviAII | CATG | 7 cut(s) | 162, 204, 354, 428, 467, 557, 746 |
| CviQI | GTAC | 5 cut(s) | 470, 492, 594, 695, 868 |
| DdeI | CTNAG | 2 cut(s) | 377, 927 |
| DpnI | GATC | 5 cut(s) | 17, 189, 271, 327, 772 |
| DpnII | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| Eam1104I | CTCTTC | 2 cut(s) | 506, 744 |
| EarI | CTCTTC | 2 cut(s) | 506, 744 |
| Eco130I | CCWWGG | 2 cut(s) | 104, 203 |
| Eco31I | GGTCTC | 2 cut(s) | 61, 792 |
| Eco32I | GATATC | 1 cut(s) | 418 |
| Eco47I | GGWCC | 3 cut(s) | 73, 260, 341 |
| Eco91I | GGTNACC | 1 cut(s) | 98 |
| EcoO65I | GGTNACC | 1 cut(s) | 98 |
| EcoRI | GAATTC | 1 cut(s) | 361 |
| EcoRII | CCWGG | 1 cut(s) | 782 |
| EcoRV | GATATC | 1 cut(s) | 418 |
| EcoT14I | CCWWGG | 2 cut(s) | 104, 203 |
| ErhI | CCWWGG | 2 cut(s) | 104, 203 |
| Esp3I | CGTCTC | 1 cut(s) | 508 |
| FaeI | CATG | 7 cut(s) | 165, 207, 357, 431, 470, 560, 749 |
| FaqI | GGGAC | 2 cut(s) | 167, 662 |
| FatI | CATG | 7 cut(s) | 161, 203, 353, 427, 466, 556, 745 |
| FauNDI | CATATG | 1 cut(s) | 69 |
| Fnu4HI | GCNGC | 2 cut(s) | 668, 713 |
| FokI | GGATG | 1 cut(s) | 926 |
| Fsp4HI | GCNGC | 2 cut(s) | 668, 713 |
| FspBI | CTAG | 4 cut(s) | 105, 329, 453, 489 |
| FspI | TGCGCA | 1 cut(s) | 63 |
| GlaI | GCGC | 1 cut(s) | 63 |
| GluI | GCNGC | 2 cut(s) | 668, 713 |
| GsuI | CTGGAG | 2 cut(s) | 43, 680 |
| HaeIII | GGCC | 1 cut(s) | 782 |
| HapII | CCGG | 4 cut(s) | 339, 802, 810, 823 |
| HgaI | GACGC | 1 cut(s) | 525 |
| HhaI | GCGC | 1 cut(s) | 64 |
| Hin1I | GRCGYC | 1 cut(s) | 517 |
| Hin1II | CATG | 7 cut(s) | 165, 207, 357, 431, 470, 560, 749 |
| Hin6I | GCGC | 1 cut(s) | 62 |
| HinP1I | GCGC | 1 cut(s) | 62 |
| HinfI | GANTC | 3 cut(s) | 194, 458, 721 |
| HpaII | CCGG | 4 cut(s) | 339, 802, 810, 823 |
| HphI | GGTGA | 3 cut(s) | 46, 572, 603 |
| Hpy166II | GTNNAC | 2 cut(s) | 594, 611 |
| Hpy188I | TCNGA | 3 cut(s) | 274, 463, 688 |
| Hpy188III | TCNNGA | 6 cut(s) | 3, 22, 191, 296, 323, 339 |
| Hpy8I | GTNNAC | 2 cut(s) | 594, 611 |
| HpyAV | CCTTC | 4 cut(s) | 329, 414, 788, 820 |
| HpyCH4III | ACNGT | 4 cut(s) | 46, 55, 158, 474 |
| HpyCH4IV | ACGT | 1 cut(s) | 433 |
| HpyCH4V | TGCA | 7 cut(s) | 137, 302, 399, 431, 442, 556, 875 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 129, 143 |
| HpyF3I | CTNAG | 2 cut(s) | 377, 927 |
| HpySE526I | ACGT | 1 cut(s) | 433 |
| Hsp92I | GRCGYC | 1 cut(s) | 517 |
| Hsp92II | CATG | 7 cut(s) | 165, 207, 357, 431, 470, 560, 749 |
| HspAI | GCGC | 1 cut(s) | 62 |
| Kpn2I | TCCGGA | 1 cut(s) | 338 |
| Kzo9I | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| LmnI | GCTCC | 3 cut(s) | 24, 92, 664 |
| Lsp1109I | GCAGC | 2 cut(s) | 654, 724 |
| LweI | GCATC | 3 cut(s) | 73, 289, 574 |
| MaeI | CTAG | 4 cut(s) | 105, 329, 453, 489 |
| MaeII | ACGT | 1 cut(s) | 433 |
| MaeIII | GTNAC | 6 cut(s) | 34, 98, 367, 474, 549, 919 |
| MalI | GATC | 5 cut(s) | 17, 189, 271, 327, 772 |
| MboI | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| MboII | GAAGA | 7 cut(s) | 10, 262, 523, 646, 718, 761, 905 |
| MflI | RGATCY | 2 cut(s) | 15, 770 |
| MluCI | AATT | 3 cut(s) | 213, 231, 361 |
| MlyI | GAGTC | 2 cut(s) | 452, 715 |
| MmeI | TCCRAC | 1 cut(s) | 363 |
| MnlI | CCTC | 9 cut(s) | 25, 105, 168, 281, 455, 532, 655, 746, 895 |
| MroI | TCCGGA | 1 cut(s) | 338 |
| MseI | TTAA | 2 cut(s) | 531, 788 |
| MslI | CAYNNNNRTG | 1 cut(s) | 202 |
| MspI | CCGG | 4 cut(s) | 339, 802, 810, 823 |
| MspR9I | CCNGG | 1 cut(s) | 784 |
| MvaI | CCWGG | 1 cut(s) | 784 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 129, 143 |
| NcoI | CCATGG | 1 cut(s) | 203 |
| NdeI | CATATG | 1 cut(s) | 69 |
| NdeII | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| NlaIII | CATG | 7 cut(s) | 165, 207, 357, 431, 470, 560, 749 |
| NlaIV | GGNNCC | 1 cut(s) | 343 |
| NmuCI | GTSAC | 2 cut(s) | 34, 367 |
| NsbI | TGCGCA | 1 cut(s) | 63 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 523 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| PkrI | GCNGC | 2 cut(s) | 669, 714 |
| PleI | GAGTC | 2 cut(s) | 452, 715 |
| PpsI | GAGTC | 2 cut(s) | 452, 715 |
| Psp6I | CCWGG | 1 cut(s) | 782 |
| PspEI | GGTNACC | 1 cut(s) | 98 |
| PspGI | CCWGG | 1 cut(s) | 782 |
| PspN4I | GGNNCC | 1 cut(s) | 343 |
| PspPI | GGNCC | 3 cut(s) | 73, 260, 341 |
| PsuI | RGATCY | 2 cut(s) | 15, 770 |
| RsaI | GTAC | 5 cut(s) | 471, 493, 595, 696, 869 |
| RsaNI | GTAC | 5 cut(s) | 470, 492, 594, 695, 868 |
| RseI | CAYNNNNRTG | 1 cut(s) | 202 |
| SaqAI | TTAA | 2 cut(s) | 531, 788 |
| SatI | GCNGC | 2 cut(s) | 668, 713 |
| Sau3AI | GATC | 5 cut(s) | 15, 187, 269, 325, 770 |
| Sau96I | GGNCC | 3 cut(s) | 73, 260, 341 |
| SchI | GAGTC | 2 cut(s) | 452, 715 |
| ScrFI | CCNGG | 1 cut(s) | 784 |
| SfaNI | GCATC | 3 cut(s) | 73, 289, 574 |
| SfcI | CTRYAG | 1 cut(s) | 45 |
| SinI | GGWCC | 3 cut(s) | 73, 260, 341 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 202 |
| Sse9I | AATT | 3 cut(s) | 213, 231, 361 |
| SspMI | CTAG | 4 cut(s) | 105, 329, 453, 489 |
| StyD4I | CCNGG | 1 cut(s) | 782 |
| StyI | CCWWGG | 2 cut(s) | 104, 203 |
| TaaI | ACNGT | 4 cut(s) | 46, 55, 158, 474 |
| TaiI | ACGT | 1 cut(s) | 436 |
| TaqI | TCGA | 4 cut(s) | 84, 268, 537, 643 |
| TasI | AATT | 3 cut(s) | 213, 231, 361 |
| TatI | WGTACW | 4 cut(s) | 491, 593, 694, 867 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| Tru1I | TTAA | 2 cut(s) | 531, 788 |
| Tru9I | TTAA | 2 cut(s) | 531, 788 |
| TscAI | CASTG | 2 cut(s) | 204, 372 |
| TseFI | GTSAC | 2 cut(s) | 34, 367 |
| TseI | GCWGC | 2 cut(s) | 667, 712 |
| Tsp45I | GTSAC | 2 cut(s) | 34, 367 |
| TspDTI | ATGAA | 3 cut(s) | 150, 243, 762 |
| TspRI | CASTG | 2 cut(s) | 204, 372 |
| VpaK11BI | GGWCC | 3 cut(s) | 73, 260, 341 |
| XapI | RAATTY | 2 cut(s) | 231, 361 |
| XmaJI | CCTAGG | 1 cut(s) | 104 |
| XspI | CTAG | 4 cut(s) | 105, 329, 453, 489 |