ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 724 |
| AcsI | RAATTY | 2 cut(s) | 86, 181 |
| AcuI | CTGAAG | 2 cut(s) | 581, 707 |
| AfaI | GTAC | 4 cut(s) | 13, 262, 342, 823 |
| AflII | CTTAAG | 2 cut(s) | 155, 608 |
| AgsI | TTSAA | 1 cut(s) | 855 |
| AluBI | AGCT | 2 cut(s) | 394, 569 |
| AluI | AGCT | 2 cut(s) | 394, 569 |
| Alw21I | GWGCWC | 2 cut(s) | 571, 809 |
| Alw26I | GTCTC | 1 cut(s) | 638 |
| AoxI | GGCC | 2 cut(s) | 307, 838 |
| ApoI | RAATTY | 2 cut(s) | 86, 181 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 524, 850 |
| AsuC2I | CCSGG | 1 cut(s) | 704 |
| AxyI | CCTNAGG | 1 cut(s) | 863 |
| BanII | GRGCYC | 1 cut(s) | 571 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 185, 217 |
| Bbv12I | GWGCWC | 2 cut(s) | 571, 809 |
| BccI | CCATC | 3 cut(s) | 352, 403, 421 |
| BceAI | ACGGC | 2 cut(s) | 558, 897 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 555, 589 |
| BcnI | CCSGG | 1 cut(s) | 704 |
| BcoDI | GTCTC | 1 cut(s) | 638 |
| BfaI | CTAG | 4 cut(s) | 54, 80, 231, 825 |
| BfrI | CTTAAG | 2 cut(s) | 155, 608 |
| BmcAI | AGTACT | 1 cut(s) | 823 |
| Bme1390I | CCNGG | 1 cut(s) | 704 |
| BmiI | GGNNCC | 1 cut(s) | 597 |
| BmrFI | CCNGG | 1 cut(s) | 704 |
| BmsI | GCATC | 1 cut(s) | 913 |
| BpuEI | CTTGAG | 1 cut(s) | 622 |
| BpuMI | CCSGG | 1 cut(s) | 704 |
| Bsa29I | ATCGAT | 1 cut(s) | 356 |
| BsaI | GGTCTC | 1 cut(s) | 638 |
| BsaJI | CCNNGG | 1 cut(s) | 841 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 796, 826 |
| Bse1I | ACTGG | 3 cut(s) | 692, 792, 810 |
| Bse21I | CCTNAGG | 1 cut(s) | 863 |
| BseCI | ATCGAT | 1 cut(s) | 356 |
| BseDI | CCNNGG | 1 cut(s) | 841 |
| BseGI | GGATG | 1 cut(s) | 432 |
| BseMII | CTCAG | 1 cut(s) | 909 |
| BseNI | ACTGG | 3 cut(s) | 692, 792, 810 |
| BseRI | GAGGAG | 2 cut(s) | 392, 647 |
| BshFI | GGCC | 2 cut(s) | 309, 840 |
| BshVI | ATCGAT | 1 cut(s) | 356 |
| BsiHKAI | GWGCWC | 2 cut(s) | 571, 809 |
| BsiSI | CCGG | 2 cut(s) | 107, 704 |
| BslFI | GGGAC | 3 cut(s) | 231, 256, 844 |
| BsmAI | GTCTC | 1 cut(s) | 638 |
| BsmFI | GGGAC | 3 cut(s) | 231, 256, 844 |
| BsnI | GGCC | 2 cut(s) | 309, 840 |
| Bso31I | GGTCTC | 1 cut(s) | 638 |
| Bsp1286I | GDGCHC | 2 cut(s) | 571, 809 |
| Bsp1407I | TGTACA | 1 cut(s) | 340 |
| Bsp143I | GATC | 2 cut(s) | 696, 742 |
| BspACI | CCGC | 1 cut(s) | 724 |
| BspANI | GGCC | 2 cut(s) | 309, 840 |
| BspCNI | CTCAG | 1 cut(s) | 908 |
| BspDI | ATCGAT | 1 cut(s) | 356 |
| BspLI | GGNNCC | 1 cut(s) | 597 |
| BspTI | CTTAAG | 2 cut(s) | 155, 608 |
| BspTNI | GGTCTC | 1 cut(s) | 638 |
| BsrGI | TGTACA | 1 cut(s) | 340 |
| BsrI | ACTGG | 3 cut(s) | 692, 792, 810 |
| BssECI | CCNNGG | 1 cut(s) | 841 |
| BssMI | GATC | 2 cut(s) | 696, 742 |
| BssT1I | CCWWGG | 1 cut(s) | 841 |
| Bst4CI | ACNGT | 1 cut(s) | 423 |
| BstAFI | CTTAAG | 2 cut(s) | 155, 608 |
| BstAUI | TGTACA | 1 cut(s) | 340 |
| BstC8I | GCNNGC | 4 cut(s) | 38, 311, 567, 749 |
| BstDEI | CTNAG | 3 cut(s) | 587, 863, 895 |
| BstF5I | GGATG | 1 cut(s) | 432 |
| BstKTI | GATC | 2 cut(s) | 699, 745 |
| BstMAI | GTCTC | 1 cut(s) | 638 |
| BstMBI | GATC | 2 cut(s) | 696, 742 |
| BstNSI | RCATGY | 1 cut(s) | 751 |
| BstSCI | CCNGG | 1 cut(s) | 702 |
| Bsu15I | ATCGAT | 1 cut(s) | 356 |
| Bsu36I | CCTNAGG | 1 cut(s) | 863 |
| BsuRI | GGCC | 2 cut(s) | 309, 840 |
| BsuTUI | ATCGAT | 1 cut(s) | 356 |
| BtgZI | GCGATG | 1 cut(s) | 899 |
| BtsCI | GGATG | 1 cut(s) | 432 |
| BtsIMutI | CAGTG | 1 cut(s) | 699 |
| Cac8I | GCNNGC | 4 cut(s) | 38, 311, 567, 749 |
| ClaI | ATCGAT | 1 cut(s) | 356 |
| Csp6I | GTAC | 4 cut(s) | 12, 261, 341, 822 |
| CviAII | CATG | 3 cut(s) | 577, 727, 748 |
| CviJI | RGCY | 7 cut(s) | 309, 394, 569, 607, 614, 691, 840 |
| CviKI_1 | RGCY | 7 cut(s) | 309, 394, 569, 607, 614, 691, 840 |
| CviQI | GTAC | 4 cut(s) | 12, 261, 341, 822 |
| DdeI | CTNAG | 3 cut(s) | 587, 863, 895 |
| DpnI | GATC | 2 cut(s) | 698, 744 |
| DpnII | GATC | 2 cut(s) | 696, 742 |
| Ecl136II | GAGCTC | 1 cut(s) | 569 |
| Eco130I | CCWWGG | 1 cut(s) | 841 |
| Eco24I | GRGCYC | 1 cut(s) | 571 |
| Eco31I | GGTCTC | 1 cut(s) | 638 |
| Eco53kI | GAGCTC | 1 cut(s) | 569 |
| Eco57I | CTGAAG | 2 cut(s) | 581, 707 |
| Eco81I | CCTNAGG | 1 cut(s) | 863 |
| EcoICRI | GAGCTC | 1 cut(s) | 569 |
| EcoT14I | CCWWGG | 1 cut(s) | 841 |
| EcoT38I | GRGCYC | 1 cut(s) | 571 |
| ErhI | CCWWGG | 1 cut(s) | 841 |
| FaeI | CATG | 3 cut(s) | 580, 730, 751 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 182, 214, 383, 415, 584, 616 |
| FaqI | GGGAC | 3 cut(s) | 231, 256, 844 |
| FatI | CATG | 3 cut(s) | 576, 726, 747 |
| FokI | GGATG | 1 cut(s) | 439 |
| FriOI | GRGCYC | 1 cut(s) | 571 |
| FspBI | CTAG | 4 cut(s) | 54, 80, 231, 825 |
| HaeIII | GGCC | 2 cut(s) | 309, 840 |
| HapII | CCGG | 2 cut(s) | 107, 704 |
| Hin1II | CATG | 3 cut(s) | 580, 730, 751 |
| HincII | GTYRAC | 1 cut(s) | 666 |
| HindII | GTYRAC | 1 cut(s) | 666 |
| HinfI | GANTC | 2 cut(s) | 149, 289 |
| HpaII | CCGG | 2 cut(s) | 107, 704 |
| Hpy166II | GTNNAC | 3 cut(s) | 666, 721, 879 |
| Hpy188I | TCNGA | 6 cut(s) | 137, 376, 493, 561, 687, 909 |
| Hpy188III | TCNNGA | 5 cut(s) | 54, 80, 146, 400, 443 |
| Hpy8I | GTNNAC | 3 cut(s) | 666, 721, 879 |
| HpyAV | CCTTC | 4 cut(s) | 586, 758, 830, 943 |
| HpyCH4III | ACNGT | 1 cut(s) | 423 |
| HpyCH4IV | ACGT | 1 cut(s) | 857 |
| HpyCH4V | TGCA | 3 cut(s) | 24, 36, 576 |
| HpyF3I | CTNAG | 3 cut(s) | 587, 863, 895 |
| HpySE526I | ACGT | 1 cut(s) | 857 |
| Hsp92II | CATG | 3 cut(s) | 580, 730, 751 |
| Kzo9I | GATC | 2 cut(s) | 696, 742 |
| LmnI | GCTCC | 2 cut(s) | 4, 804 |
| LweI | GCATC | 1 cut(s) | 913 |
| MaeI | CTAG | 4 cut(s) | 54, 80, 231, 825 |
| MaeII | ACGT | 1 cut(s) | 857 |
| MaeIII | GTNAC | 1 cut(s) | 677 |
| MalI | GATC | 2 cut(s) | 698, 744 |
| MboI | GATC | 2 cut(s) | 696, 742 |
| MboII | GAAGA | 2 cut(s) | 42, 396 |
| MhlI | GDGCHC | 2 cut(s) | 571, 809 |
| MluCI | AATT | 5 cut(s) | 25, 86, 181, 474, 498 |
| MmeI | TCCRAC | 1 cut(s) | 252 |
| MnlI | CCTC | 3 cut(s) | 370, 597, 625 |
| MroXI | GAANNNNTTC | 2 cut(s) | 524, 850 |
| MseI | TTAA | 6 cut(s) | 156, 501, 609, 755, 770, 917 |
| MspCI | CTTAAG | 2 cut(s) | 155, 608 |
| MspI | CCGG | 2 cut(s) | 107, 704 |
| MspR9I | CCNGG | 1 cut(s) | 704 |
| NciI | CCSGG | 1 cut(s) | 704 |
| NdeII | GATC | 2 cut(s) | 696, 742 |
| NlaIII | CATG | 3 cut(s) | 580, 730, 751 |
| NlaIV | GGNNCC | 1 cut(s) | 597 |
| NmuCI | GTSAC | 1 cut(s) | 677 |
| NspI | RCATGY | 1 cut(s) | 751 |
| PaeI | GCATGC | 1 cut(s) | 751 |
| PdmI | GAANNNNTTC | 2 cut(s) | 524, 850 |
| PfeI | GAWTC | 2 cut(s) | 149, 289 |
| Psp124BI | GAGCTC | 1 cut(s) | 571 |
| PspN4I | GGNNCC | 1 cut(s) | 597 |
| RsaI | GTAC | 4 cut(s) | 13, 262, 342, 823 |
| RsaNI | GTAC | 4 cut(s) | 12, 261, 341, 822 |
| SacI | GAGCTC | 1 cut(s) | 571 |
| SaqAI | TTAA | 6 cut(s) | 156, 501, 609, 755, 770, 917 |
| Sau3AI | GATC | 2 cut(s) | 696, 742 |
| ScaI | AGTACT | 1 cut(s) | 823 |
| ScrFI | CCNGG | 1 cut(s) | 704 |
| SduI | GDGCHC | 2 cut(s) | 571, 809 |
| SetI | ASST | 9 cut(s) | 266, 396, 525, 571, 597, 769, 853, 860, 935 |
| SfaNI | GCATC | 1 cut(s) | 913 |
| SmlI | CTYRAG | 3 cut(s) | 155, 601, 608 |
| SmoI | CTYRAG | 3 cut(s) | 155, 601, 608 |
| SphI | GCATGC | 1 cut(s) | 751 |
| Sse9I | AATT | 5 cut(s) | 25, 86, 181, 474, 498 |
| SsiI | CCGC | 1 cut(s) | 724 |
| SspI | AATATT | 1 cut(s) | 141 |
| SspMI | CTAG | 4 cut(s) | 54, 80, 231, 825 |
| SstI | GAGCTC | 1 cut(s) | 571 |
| StyD4I | CCNGG | 1 cut(s) | 702 |
| StyI | CCWWGG | 1 cut(s) | 841 |
| TaaI | ACNGT | 1 cut(s) | 423 |
| TaiI | ACGT | 1 cut(s) | 860 |
| TaqI | TCGA | 1 cut(s) | 356 |
| TasI | AATT | 5 cut(s) | 25, 86, 181, 474, 498 |
| TatI | WGTACW | 3 cut(s) | 11, 340, 821 |
| TfiI | GAWTC | 2 cut(s) | 149, 289 |
| Tru1I | TTAA | 6 cut(s) | 156, 501, 609, 755, 770, 917 |
| Tru9I | TTAA | 6 cut(s) | 156, 501, 609, 755, 770, 917 |
| TscAI | CASTG | 1 cut(s) | 699 |
| TseFI | GTSAC | 1 cut(s) | 677 |
| Tsp45I | GTSAC | 1 cut(s) | 677 |
| TspDTI | ATGAA | 4 cut(s) | 58, 99, 849, 902 |
| TspRI | CASTG | 1 cut(s) | 699 |
| Vha464I | CTTAAG | 2 cut(s) | 155, 608 |
| XapI | RAATTY | 2 cut(s) | 86, 181 |
| XbaI | TCTAGA | 2 cut(s) | 53, 79 |
| XceI | RCATGY | 1 cut(s) | 751 |
| XmnI | GAANNNNTTC | 2 cut(s) | 524, 850 |
| XspI | CTAG | 4 cut(s) | 54, 80, 231, 825 |
| ZrmI | AGTACT | 1 cut(s) | 823 |