ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 860 |
| AccI | GTMKAC | 1 cut(s) | 806 |
| AciI | CCGC | 1 cut(s) | 164 |
| AclWI | GGATC | 2 cut(s) | 286, 299 |
| AcuI | CTGAAG | 2 cut(s) | 111, 759 |
| AcyI | GRCGYC | 1 cut(s) | 478 |
| AfaI | GTAC | 3 cut(s) | 10, 465, 633 |
| AfeI | AGCGCT | 2 cut(s) | 266, 794 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AgsI | TTSAA | 1 cut(s) | 262 |
| AluBI | AGCT | 1 cut(s) | 325 |
| AluI | AGCT | 1 cut(s) | 325 |
| Alw26I | GTCTC | 1 cut(s) | 485 |
| AlwI | GGATC | 2 cut(s) | 286, 299 |
| Aor51HI | AGCGCT | 2 cut(s) | 266, 794 |
| ApeKI | GCWGC | 1 cut(s) | 685 |
| AspA2I | CCTAGG | 1 cut(s) | 413 |
| AspLEI | GCGC | 2 cut(s) | 267, 795 |
| AspS9I | GGNCC | 3 cut(s) | 409, 707, 760 |
| AsuHPI | GGTGA | 2 cut(s) | 466, 596 |
| AvaII | GGWCC | 3 cut(s) | 409, 707, 760 |
| AvrII | CCTAGG | 1 cut(s) | 413 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 432, 465 |
| BamHI | GGATCC | 1 cut(s) | 291 |
| BbvI | GCAGC | 1 cut(s) | 672 |
| BccI | CCATC | 3 cut(s) | 190, 438, 849 |
| BceAI | ACGGC | 1 cut(s) | 57 |
| BciVI | GTATCC | 1 cut(s) | 510 |
| BclI | TGATCA | 1 cut(s) | 514 |
| BcoDI | GTCTC | 1 cut(s) | 485 |
| BfaI | CTAG | 3 cut(s) | 414, 543, 548 |
| BfmI | CTRYAG | 1 cut(s) | 493 |
| BfoI | RGCGCY | 2 cut(s) | 268, 796 |
| BfuI | GTATCC | 1 cut(s) | 510 |
| BisI | GCNGC | 1 cut(s) | 686 |
| BlnI | CCTAGG | 1 cut(s) | 413 |
| BlsI | GCNGC | 1 cut(s) | 687 |
| Bme18I | GGWCC | 3 cut(s) | 409, 707, 760 |
| BmgT120I | GGNCC | 3 cut(s) | 409, 707, 760 |
| BmiI | GGNNCC | 4 cut(s) | 247, 293, 411, 708 |
| BmrI | ACTGGG | 2 cut(s) | 476, 629 |
| BmsI | GCATC | 2 cut(s) | 148, 544 |
| BmuI | ACTGGG | 2 cut(s) | 476, 629 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 782, 814 |
| BsaBI | GATNNNNATC | 1 cut(s) | 860 |
| BsaHI | GRCGYC | 1 cut(s) | 478 |
| BsaJI | CCNNGG | 2 cut(s) | 250, 413 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse1I | ACTGG | 2 cut(s) | 471, 624 |
| Bse3DI | GCAATG | 1 cut(s) | 643 |
| Bse8I | GATNNNNATC | 1 cut(s) | 860 |
| BseDI | CCNNGG | 2 cut(s) | 250, 413 |
| BseGI | GGATG | 1 cut(s) | 476 |
| BseJI | GATNNNNATC | 1 cut(s) | 860 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMI | GCAATG | 1 cut(s) | 643 |
| BseMII | CTCAG | 1 cut(s) | 780 |
| BseNI | ACTGG | 2 cut(s) | 471, 624 |
| BseXI | GCAGC | 1 cut(s) | 672 |
| BslFI | GGGAC | 3 cut(s) | 387, 395, 720 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmAI | GTCTC | 1 cut(s) | 485 |
| BsmBI | CGTCTC | 1 cut(s) | 485 |
| BsmFI | GGGAC | 3 cut(s) | 387, 395, 720 |
| Bsp143I | GATC | 3 cut(s) | 291, 514, 640 |
| BspACI | CCGC | 1 cut(s) | 164 |
| BspCNI | CTCAG | 1 cut(s) | 781 |
| BspLI | GGNNCC | 4 cut(s) | 247, 293, 411, 708 |
| BspPI | GGATC | 2 cut(s) | 286, 299 |
| BsrDI | GCAATG | 1 cut(s) | 643 |
| BsrI | ACTGG | 2 cut(s) | 471, 624 |
| BssECI | CCNNGG | 2 cut(s) | 250, 413 |
| BssMI | GATC | 3 cut(s) | 291, 514, 640 |
| BssNI | GRCGYC | 1 cut(s) | 478 |
| BssT1I | CCWWGG | 2 cut(s) | 250, 413 |
| Bst4CI | ACNGT | 3 cut(s) | 258, 764, 811 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstACI | GRCGYC | 1 cut(s) | 478 |
| BstC8I | GCNNGC | 2 cut(s) | 106, 869 |
| BstDEI | CTNAG | 1 cut(s) | 789 |
| BstF5I | GGATG | 1 cut(s) | 476 |
| BstH2I | RGCGCY | 2 cut(s) | 268, 796 |
| BstHHI | GCGC | 2 cut(s) | 267, 795 |
| BstKTI | GATC | 3 cut(s) | 294, 517, 643 |
| BstMAI | GTCTC | 1 cut(s) | 485 |
| BstMBI | GATC | 3 cut(s) | 291, 514, 640 |
| BstSFI | CTRYAG | 1 cut(s) | 493 |
| BstV1I | GCAGC | 1 cut(s) | 672 |
| BstX2I | RGATCY | 1 cut(s) | 291 |
| BstYI | RGATCY | 1 cut(s) | 291 |
| BsuI | GTATCC | 1 cut(s) | 510 |
| BtsCI | GGATG | 1 cut(s) | 476 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 2 cut(s) | 106, 869 |
| CfoI | GCGC | 2 cut(s) | 267, 795 |
| Cfr13I | GGNCC | 3 cut(s) | 409, 707, 760 |
| CseI | GACGC | 2 cut(s) | 97, 467 |
| Csp6I | GTAC | 3 cut(s) | 9, 464, 632 |
| CviAII | CATG | 4 cut(s) | 56, 178, 385, 528 |
| CviQI | GTAC | 3 cut(s) | 9, 464, 632 |
| DdeI | CTNAG | 1 cut(s) | 789 |
| DpnI | GATC | 3 cut(s) | 293, 516, 642 |
| DpnII | GATC | 3 cut(s) | 291, 514, 640 |
| DraI | TTTAAA | 1 cut(s) | 195 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| Eco130I | CCWWGG | 2 cut(s) | 250, 413 |
| Eco32I | GATATC | 2 cut(s) | 173, 745 |
| Eco47I | GGWCC | 3 cut(s) | 409, 707, 760 |
| Eco47III | AGCGCT | 2 cut(s) | 266, 794 |
| Eco57I | CTGAAG | 2 cut(s) | 111, 759 |
| EcoRV | GATATC | 2 cut(s) | 173, 745 |
| EcoT14I | CCWWGG | 2 cut(s) | 250, 413 |
| ErhI | CCWWGG | 2 cut(s) | 250, 413 |
| Esp3I | CGTCTC | 1 cut(s) | 485 |
| FaeI | CATG | 4 cut(s) | 59, 181, 388, 531 |
| FaqI | GGGAC | 3 cut(s) | 387, 395, 720 |
| FatI | CATG | 4 cut(s) | 55, 177, 384, 527 |
| FauI | CCCGC | 1 cut(s) | 157 |
| FauNDI | CATATG | 1 cut(s) | 210 |
| FbaI | TGATCA | 1 cut(s) | 514 |
| FblI | GTMKAC | 1 cut(s) | 806 |
| Fnu4HI | GCNGC | 1 cut(s) | 686 |
| FokI | GGATG | 1 cut(s) | 483 |
| Fsp4HI | GCNGC | 1 cut(s) | 686 |
| FspBI | CTAG | 3 cut(s) | 414, 543, 548 |
| GlaI | GCGC | 2 cut(s) | 266, 794 |
| GluI | GCNGC | 1 cut(s) | 686 |
| HaeII | RGCGCY | 2 cut(s) | 268, 796 |
| HgaI | GACGC | 2 cut(s) | 97, 467 |
| HhaI | GCGC | 2 cut(s) | 267, 795 |
| Hin1I | GRCGYC | 1 cut(s) | 478 |
| Hin1II | CATG | 4 cut(s) | 59, 181, 388, 531 |
| Hin6I | GCGC | 2 cut(s) | 265, 793 |
| HinP1I | GCGC | 2 cut(s) | 265, 793 |
| HincII | GTYRAC | 2 cut(s) | 79, 112 |
| HindII | GTYRAC | 2 cut(s) | 79, 112 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HinfI | GANTC | 2 cut(s) | 29, 489 |
| HphI | GGTGA | 2 cut(s) | 466, 596 |
| Hpy166II | GTNNAC | 4 cut(s) | 79, 112, 717, 807 |
| Hpy188I | TCNGA | 3 cut(s) | 34, 790, 838 |
| Hpy188III | TCNNGA | 3 cut(s) | 89, 143, 737 |
| Hpy8I | GTNNAC | 4 cut(s) | 79, 112, 717, 807 |
| HpyAV | CCTTC | 1 cut(s) | 92 |
| HpyCH4III | ACNGT | 3 cut(s) | 258, 764, 811 |
| HpyCH4V | TGCA | 2 cut(s) | 139, 688 |
| HpyF3I | CTNAG | 1 cut(s) | 789 |
| Hsp92I | GRCGYC | 1 cut(s) | 478 |
| Hsp92II | CATG | 4 cut(s) | 59, 181, 388, 531 |
| HspAI | GCGC | 2 cut(s) | 265, 793 |
| Ksp22I | TGATCA | 1 cut(s) | 514 |
| Kzo9I | GATC | 3 cut(s) | 291, 514, 640 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| Lsp1109I | GCAGC | 1 cut(s) | 672 |
| LweI | GCATC | 2 cut(s) | 148, 544 |
| MaeI | CTAG | 3 cut(s) | 414, 543, 548 |
| MaeIII | GTNAC | 2 cut(s) | 505, 584 |
| MalI | GATC | 3 cut(s) | 293, 516, 642 |
| MboI | GATC | 3 cut(s) | 291, 514, 640 |
| MboII | GAAGA | 4 cut(s) | 38, 74, 104, 752 |
| MflI | RGATCY | 1 cut(s) | 291 |
| MluCI | AATT | 2 cut(s) | 533, 692 |
| MmeI | TCCRAC | 1 cut(s) | 851 |
| MnlI | CCTC | 6 cut(s) | 88, 96, 265, 282, 439, 589 |
| MseI | TTAA | 7 cut(s) | 194, 450, 591, 770, 852, 879, 889 |
| NdeI | CATATG | 1 cut(s) | 210 |
| NdeII | GATC | 3 cut(s) | 291, 514, 640 |
| NlaIII | CATG | 4 cut(s) | 59, 181, 388, 531 |
| NlaIV | GGNNCC | 4 cut(s) | 247, 293, 411, 708 |
| NmuCI | GTSAC | 1 cut(s) | 584 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 640, 760 |
| PfeI | GAWTC | 2 cut(s) | 29, 489 |
| PkrI | GCNGC | 1 cut(s) | 687 |
| PsiI | TTATAA | 1 cut(s) | 860 |
| PspN4I | GGNNCC | 4 cut(s) | 247, 293, 411, 708 |
| PspPI | GGNCC | 3 cut(s) | 409, 707, 760 |
| PsuI | RGATCY | 1 cut(s) | 291 |
| RsaI | GTAC | 3 cut(s) | 10, 465, 633 |
| RsaNI | GTAC | 3 cut(s) | 9, 464, 632 |
| SaqAI | TTAA | 7 cut(s) | 194, 450, 591, 770, 852, 879, 889 |
| SatI | GCNGC | 1 cut(s) | 686 |
| Sau3AI | GATC | 3 cut(s) | 291, 514, 640 |
| Sau96I | GGNCC | 3 cut(s) | 409, 707, 760 |
| SfaNI | GCATC | 2 cut(s) | 148, 544 |
| SfcI | CTRYAG | 1 cut(s) | 493 |
| SinI | GGWCC | 3 cut(s) | 409, 707, 760 |
| Sse9I | AATT | 2 cut(s) | 533, 692 |
| SsiI | CCGC | 1 cut(s) | 164 |
| SspI | AATATT | 1 cut(s) | 313 |
| SspMI | CTAG | 3 cut(s) | 414, 543, 548 |
| StyI | CCWWGG | 2 cut(s) | 250, 413 |
| TaaI | ACNGT | 3 cut(s) | 258, 764, 811 |
| TaqI | TCGA | 1 cut(s) | 643 |
| TasI | AATT | 2 cut(s) | 533, 692 |
| TfiI | GAWTC | 2 cut(s) | 29, 489 |
| Tru1I | TTAA | 7 cut(s) | 194, 450, 591, 770, 852, 879, 889 |
| Tru9I | TTAA | 7 cut(s) | 194, 450, 591, 770, 852, 879, 889 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseFI | GTSAC | 1 cut(s) | 584 |
| TseI | GCWGC | 1 cut(s) | 685 |
| Tsp45I | GTSAC | 1 cut(s) | 584 |
| TspDTI | ATGAA | 4 cut(s) | 75, 373, 627, 806 |
| TspGWI | ACGGA | 3 cut(s) | 38, 170, 737 |
| TspRI | CASTG | 1 cut(s) | 106 |
| VpaK11BI | GGWCC | 3 cut(s) | 409, 707, 760 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 717 |
| XmaJI | CCTAGG | 1 cut(s) | 413 |
| XmiI | GTMKAC | 1 cut(s) | 806 |
| XspI | CTAG | 3 cut(s) | 414, 543, 548 |