ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 13 |
| AclI | AACGTT | 1 cut(s) | 388 |
| AclWI | GGATC | 3 cut(s) | 27, 291, 348 |
| AcyI | GRCGYC | 1 cut(s) | 38 |
| AdeI | CACNNNGTG | 1 cut(s) | 89 |
| AfaI | GTAC | 1 cut(s) | 34 |
| AgsI | TTSAA | 4 cut(s) | 317, 393, 409, 478 |
| AjnI | CCWGG | 5 cut(s) | 15, 140, 174, 363, 401 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 373, 405 |
| AluBI | AGCT | 4 cut(s) | 10, 26, 194, 590 |
| AluI | AGCT | 4 cut(s) | 10, 26, 194, 590 |
| AlwI | GGATC | 3 cut(s) | 27, 291, 348 |
| Ama87I | CYCGRG | 1 cut(s) | 605 |
| AoxI | GGCC | 3 cut(s) | 231, 567, 609 |
| ApeKI | GCWGC | 5 cut(s) | 7, 73, 137, 346, 596 |
| AsuHPI | GGTGA | 2 cut(s) | 190, 428 |
| AvaI | CYCGRG | 1 cut(s) | 605 |
| BbsI | GAAGAC | 2 cut(s) | 152, 534 |
| BbvI | GCAGC | 5 cut(s) | 19, 85, 124, 333, 608 |
| BccI | CCATC | 3 cut(s) | 116, 331, 620 |
| BceAI | ACGGC | 2 cut(s) | 51, 582 |
| BciT130I | CCWGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| BfaI | CTAG | 4 cut(s) | 23, 273, 593, 621 |
| BfmI | CTRYAG | 2 cut(s) | 71, 347 |
| BisI | GCNGC | 5 cut(s) | 8, 74, 138, 347, 597 |
| BlsI | GCNGC | 5 cut(s) | 9, 75, 139, 348, 598 |
| Bme1390I | CCNGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| BmeT110I | CYCGRG | 1 cut(s) | 605 |
| BmrFI | CCNGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| BmsI | GCATC | 5 cut(s) | 85, 124, 142, 246, 458 |
| BpiI | GAAGAC | 2 cut(s) | 152, 534 |
| BpuEI | CTTGAG | 1 cut(s) | 299 |
| BsaHI | GRCGYC | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 1 cut(s) | 363 |
| Bse1I | ACTGG | 1 cut(s) | 433 |
| BseBI | CCWGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| BseDI | CCNNGG | 1 cut(s) | 363 |
| BseGI | GGATG | 1 cut(s) | 612 |
| BseMII | CTCAG | 1 cut(s) | 108 |
| BseNI | ACTGG | 1 cut(s) | 433 |
| BseRI | GAGGAG | 1 cut(s) | 383 |
| BseXI | GCAGC | 5 cut(s) | 19, 85, 124, 333, 608 |
| BshFI | GGCC | 3 cut(s) | 233, 569, 611 |
| BsiHKCI | CYCGRG | 1 cut(s) | 605 |
| BsnI | GGCC | 3 cut(s) | 233, 569, 611 |
| BsoBI | CYCGRG | 1 cut(s) | 605 |
| Bsp143I | GATC | 3 cut(s) | 19, 283, 340 |
| BspACI | CCGC | 1 cut(s) | 13 |
| BspANI | GGCC | 3 cut(s) | 233, 569, 611 |
| BspCNI | CTCAG | 1 cut(s) | 107 |
| BspMAI | CTGCAG | 2 cut(s) | 75, 351 |
| BspPI | GGATC | 3 cut(s) | 27, 291, 348 |
| BsrI | ACTGG | 1 cut(s) | 433 |
| BssECI | CCNNGG | 1 cut(s) | 363 |
| BssMI | GATC | 3 cut(s) | 19, 283, 340 |
| BssNI | GRCGYC | 1 cut(s) | 38 |
| Bst2UI | CCWGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| Bst6I | CTCTTC | 1 cut(s) | 320 |
| BstACI | GRCGYC | 1 cut(s) | 38 |
| BstDEI | CTNAG | 2 cut(s) | 94, 555 |
| BstEII | GGTNACC | 1 cut(s) | 397 |
| BstF5I | GGATG | 1 cut(s) | 612 |
| BstKTI | GATC | 3 cut(s) | 22, 286, 343 |
| BstMBI | GATC | 3 cut(s) | 19, 283, 340 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 596 |
| BstNI | CCWGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| BstPI | GGTNACC | 1 cut(s) | 397 |
| BstSCI | CCNGG | 5 cut(s) | 15, 140, 174, 363, 401 |
| BstSFI | CTRYAG | 2 cut(s) | 71, 347 |
| BstV1I | GCAGC | 5 cut(s) | 19, 85, 124, 333, 608 |
| BstV2I | GAAGAC | 2 cut(s) | 152, 534 |
| BstX2I | RGATCY | 2 cut(s) | 19, 283 |
| BstYI | RGATCY | 2 cut(s) | 19, 283 |
| BsuRI | GGCC | 3 cut(s) | 233, 569, 611 |
| BtsCI | GGATG | 1 cut(s) | 612 |
| BtsI | GCAGTG | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 2 cut(s) | 162, 426 |
| CseI | GACGC | 1 cut(s) | 27 |
| CsiI | ACCWGGT | 1 cut(s) | 401 |
| Csp6I | GTAC | 1 cut(s) | 33 |
| CviAII | CATG | 3 cut(s) | 110, 442, 584 |
| CviQI | GTAC | 1 cut(s) | 33 |
| DdeI | CTNAG | 2 cut(s) | 94, 555 |
| DpnI | GATC | 3 cut(s) | 21, 285, 342 |
| DpnII | GATC | 3 cut(s) | 19, 283, 340 |
| DraIII | CACNNNGTG | 1 cut(s) | 89 |
| Eam1104I | CTCTTC | 1 cut(s) | 320 |
| EarI | CTCTTC | 1 cut(s) | 320 |
| Eco147I | AGGCCT | 1 cut(s) | 233 |
| Eco88I | CYCGRG | 1 cut(s) | 605 |
| Eco91I | GGTNACC | 1 cut(s) | 397 |
| EcoO65I | GGTNACC | 1 cut(s) | 397 |
| EcoRII | CCWGG | 5 cut(s) | 15, 140, 174, 363, 401 |
| FaeI | CATG | 3 cut(s) | 113, 445, 587 |
| FaiI | YATR | 8 cut(s) | 55, 57, 63, 111, 170, 198, 443, 585 |
| FatI | CATG | 3 cut(s) | 109, 441, 583 |
| Fnu4HI | GCNGC | 5 cut(s) | 8, 74, 138, 347, 597 |
| FokI | GGATG | 1 cut(s) | 599 |
| Fsp4HI | GCNGC | 5 cut(s) | 8, 74, 138, 347, 597 |
| FspBI | CTAG | 4 cut(s) | 23, 273, 593, 621 |
| GluI | GCNGC | 5 cut(s) | 8, 74, 138, 347, 597 |
| HaeIII | GGCC | 3 cut(s) | 233, 569, 611 |
| HgaI | GACGC | 1 cut(s) | 27 |
| Hin1I | GRCGYC | 1 cut(s) | 38 |
| Hin1II | CATG | 3 cut(s) | 113, 445, 587 |
| HinfI | GANTC | 2 cut(s) | 92, 371 |
| HphI | GGTGA | 2 cut(s) | 190, 428 |
| Hpy166II | GTNNAC | 1 cut(s) | 564 |
| Hpy188I | TCNGA | 2 cut(s) | 97, 263 |
| Hpy188III | TCNNGA | 1 cut(s) | 379 |
| Hpy8I | GTNNAC | 1 cut(s) | 564 |
| Hpy99I | CGWCG | 1 cut(s) | 43 |
| HpyAV | CCTTC | 6 cut(s) | 385, 403, 407, 453, 472, 515 |
| HpyCH4IV | ACGT | 1 cut(s) | 388 |
| HpyCH4V | TGCA | 5 cut(s) | 7, 73, 106, 155, 349 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 596 |
| HpyF3I | CTNAG | 2 cut(s) | 94, 555 |
| HpySE526I | ACGT | 1 cut(s) | 388 |
| Hsp92I | GRCGYC | 1 cut(s) | 38 |
| Hsp92II | CATG | 3 cut(s) | 113, 445, 587 |
| Kzo9I | GATC | 3 cut(s) | 19, 283, 340 |
| LmnI | GCTCC | 2 cut(s) | 15, 241 |
| Lsp1109I | GCAGC | 5 cut(s) | 19, 85, 124, 333, 608 |
| LweI | GCATC | 5 cut(s) | 85, 124, 142, 246, 458 |
| MabI | ACCWGGT | 1 cut(s) | 401 |
| MaeI | CTAG | 4 cut(s) | 23, 273, 593, 621 |
| MaeII | ACGT | 1 cut(s) | 388 |
| MaeIII | GTNAC | 4 cut(s) | 89, 178, 351, 397 |
| MalI | GATC | 3 cut(s) | 21, 285, 342 |
| MboI | GATC | 3 cut(s) | 19, 283, 340 |
| MboII | GAAGA | 4 cut(s) | 157, 337, 524, 534 |
| MflI | RGATCY | 2 cut(s) | 19, 283 |
| MluCI | AATT | 2 cut(s) | 264, 472 |
| MlyI | GAGTC | 2 cut(s) | 86, 380 |
| MnlI | CCTC | 7 cut(s) | 274, 301, 321, 361, 456, 580, 601 |
| MseI | TTAA | 1 cut(s) | 237 |
| MspR9I | CCNGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| MvaI | CCWGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 596 |
| NdeII | GATC | 3 cut(s) | 19, 283, 340 |
| NlaIII | CATG | 3 cut(s) | 113, 445, 587 |
| NmuCI | GTSAC | 3 cut(s) | 89, 178, 351 |
| PaeR7I | CTCGAG | 1 cut(s) | 605 |
| PceI | AGGCCT | 1 cut(s) | 233 |
| PkrI | GCNGC | 5 cut(s) | 9, 75, 139, 348, 598 |
| PleI | GAGTC | 2 cut(s) | 86, 379 |
| PpsI | GAGTC | 2 cut(s) | 86, 379 |
| Psp1406I | AACGTT | 1 cut(s) | 388 |
| Psp6I | CCWGG | 5 cut(s) | 15, 140, 174, 363, 401 |
| PspEI | GGTNACC | 1 cut(s) | 397 |
| PspGI | CCWGG | 5 cut(s) | 15, 140, 174, 363, 401 |
| PspXI | VCTCGAGB | 1 cut(s) | 605 |
| PstI | CTGCAG | 2 cut(s) | 75, 351 |
| PsuI | RGATCY | 2 cut(s) | 19, 283 |
| RsaI | GTAC | 1 cut(s) | 34 |
| RsaNI | GTAC | 1 cut(s) | 33 |
| SaqAI | TTAA | 1 cut(s) | 237 |
| SatI | GCNGC | 5 cut(s) | 8, 74, 138, 347, 597 |
| Sau3AI | GATC | 3 cut(s) | 19, 283, 340 |
| SchI | GAGTC | 2 cut(s) | 86, 380 |
| ScrFI | CCNGG | 5 cut(s) | 17, 142, 176, 365, 403 |
| SexAI | ACCWGGT | 1 cut(s) | 401 |
| SfaNI | GCATC | 5 cut(s) | 85, 124, 142, 246, 458 |
| SfcI | CTRYAG | 2 cut(s) | 71, 347 |
| Sfr274I | CTCGAG | 1 cut(s) | 605 |
| SlaI | CTCGAG | 1 cut(s) | 605 |
| SmlI | CTYRAG | 2 cut(s) | 278, 605 |
| SmoI | CTYRAG | 2 cut(s) | 278, 605 |
| Sse9I | AATT | 2 cut(s) | 264, 472 |
| SseBI | AGGCCT | 1 cut(s) | 233 |
| SsiI | CCGC | 1 cut(s) | 13 |
| SspI | AATATT | 1 cut(s) | 577 |
| SspMI | CTAG | 4 cut(s) | 23, 273, 593, 621 |
| StuI | AGGCCT | 1 cut(s) | 233 |
| StyD4I | CCNGG | 5 cut(s) | 15, 140, 174, 363, 401 |
| TaiI | ACGT | 1 cut(s) | 391 |
| TaqI | TCGA | 1 cut(s) | 606 |
| TasI | AATT | 2 cut(s) | 264, 472 |
| Tru1I | TTAA | 1 cut(s) | 237 |
| Tru9I | TTAA | 1 cut(s) | 237 |
| TscAI | CASTG | 2 cut(s) | 162, 433 |
| TseFI | GTSAC | 3 cut(s) | 89, 178, 351 |
| TseI | GCWGC | 5 cut(s) | 7, 73, 137, 346, 596 |
| Tsp45I | GTSAC | 3 cut(s) | 89, 178, 351 |
| TspDTI | ATGAA | 4 cut(s) | 458, 507, 534, 600 |
| TspRI | CASTG | 2 cut(s) | 162, 433 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 107 |
| XhoI | CTCGAG | 1 cut(s) | 605 |
| XspI | CTAG | 4 cut(s) | 23, 273, 593, 621 |