ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 7, 398 |
| AcsI | RAATTY | 1 cut(s) | 133 |
| AcuI | CTGAAG | 1 cut(s) | 254 |
| AfaI | GTAC | 3 cut(s) | 212, 365, 456 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 120 |
| AgsI | TTSAA | 1 cut(s) | 359 |
| AjnI | CCWGG | 1 cut(s) | 379 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw26I | GTCTC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 1 cut(s) | 449 |
| ApoI | RAATTY | 1 cut(s) | 133 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 267 |
| AspS9I | GGNCC | 2 cut(s) | 4, 383 |
| AsuHPI | GGTGA | 2 cut(s) | 352, 446 |
| AvaII | GGWCC | 2 cut(s) | 4, 383 |
| BbvI | GCAGC | 1 cut(s) | 436 |
| BccI | CCATC | 2 cut(s) | 239, 383 |
| BceAI | ACGGC | 1 cut(s) | 385 |
| BciT130I | CCWGG | 1 cut(s) | 381 |
| BcoDI | GTCTC | 1 cut(s) | 67 |
| BfmI | CTRYAG | 3 cut(s) | 240, 450, 467 |
| BisI | GCNGC | 2 cut(s) | 398, 450 |
| BlsI | GCNGC | 2 cut(s) | 399, 451 |
| Bme1390I | CCNGG | 1 cut(s) | 381 |
| Bme18I | GGWCC | 2 cut(s) | 4, 383 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 383 |
| BmrFI | CCNGG | 1 cut(s) | 381 |
| BmrI | ACTGGG | 1 cut(s) | 316 |
| BmuI | ACTGGG | 1 cut(s) | 316 |
| BpuEI | CTTGAG | 1 cut(s) | 56 |
| BsaWI | WCCGGW | 1 cut(s) | 385 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 23, 53, 338, 368 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 120 |
| Bse1I | ACTGG | 1 cut(s) | 322 |
| BseBI | CCWGG | 1 cut(s) | 381 |
| BseGI | GGATG | 1 cut(s) | 394 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 120 |
| BseNI | ACTGG | 1 cut(s) | 322 |
| BseRI | GAGGAG | 3 cut(s) | 44, 311, 350 |
| BseXI | GCAGC | 1 cut(s) | 436 |
| BsiSI | CCGG | 1 cut(s) | 386 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 120 |
| BsmAI | GTCTC | 1 cut(s) | 67 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| BspACI | CCGC | 2 cut(s) | 7, 398 |
| BspMAI | CTGCAG | 1 cut(s) | 454 |
| BsrI | ACTGG | 1 cut(s) | 322 |
| BssMI | GATC | 1 cut(s) | 82 |
| Bst2UI | CCWGG | 1 cut(s) | 381 |
| Bst4CI | ACNGT | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 273 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 118 |
| BstF5I | GGATG | 1 cut(s) | 394 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMAI | GTCTC | 1 cut(s) | 67 |
| BstMBI | GATC | 1 cut(s) | 82 |
| BstNI | CCWGG | 1 cut(s) | 381 |
| BstSCI | CCNGG | 1 cut(s) | 379 |
| BstSFI | CTRYAG | 3 cut(s) | 240, 450, 467 |
| BstV1I | GCAGC | 1 cut(s) | 436 |
| BtsCI | GGATG | 1 cut(s) | 394 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 383 |
| Csp6I | GTAC | 3 cut(s) | 211, 364, 455 |
| CviAII | CATG | 1 cut(s) | 66 |
| CviJI | RGCY | 7 cut(s) | 56, 70, 113, 167, 275, 350, 397 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 70, 113, 167, 275, 350, 397 |
| CviQI | GTAC | 3 cut(s) | 211, 364, 455 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| Eam1104I | CTCTTC | 1 cut(s) | 273 |
| EarI | CTCTTC | 1 cut(s) | 273 |
| Eco47I | GGWCC | 2 cut(s) | 4, 383 |
| Eco57I | CTGAAG | 1 cut(s) | 254 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 118 |
| EcoRII | CCWGG | 1 cut(s) | 379 |
| FaeI | CATG | 1 cut(s) | 69 |
| FaiI | YATR | 8 cut(s) | 67, 105, 228, 242, 327, 431, 459, 469 |
| FatI | CATG | 1 cut(s) | 65 |
| Fnu4HI | GCNGC | 2 cut(s) | 398, 450 |
| FokI | GGATG | 1 cut(s) | 401 |
| Fsp4HI | GCNGC | 2 cut(s) | 398, 450 |
| GluI | GCNGC | 2 cut(s) | 398, 450 |
| HapII | CCGG | 1 cut(s) | 386 |
| Hin1II | CATG | 1 cut(s) | 69 |
| HinfI | GANTC | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 386 |
| HphI | GGTGA | 2 cut(s) | 352, 446 |
| Hpy188I | TCNGA | 1 cut(s) | 28 |
| HpyAV | CCTTC | 1 cut(s) | 337 |
| HpyCH4III | ACNGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 1 cut(s) | 452 |
| Hsp92II | CATG | 1 cut(s) | 69 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LpnPI | CCDG | 8 cut(s) | 147, 219, 257, 335, 366, 393, 399, 425 |
| Lsp1109I | GCAGC | 1 cut(s) | 436 |
| MaeIII | GTNAC | 1 cut(s) | 289 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MboII | GAAGA | 3 cut(s) | 188, 232, 260 |
| MluCI | AATT | 3 cut(s) | 35, 133, 460 |
| MlyI | GAGTC | 1 cut(s) | 55 |
| MroXI | GAANNNNTTC | 1 cut(s) | 267 |
| MspI | CCGG | 1 cut(s) | 386 |
| MspR9I | CCNGG | 1 cut(s) | 381 |
| MvaI | CCWGG | 1 cut(s) | 381 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 1 cut(s) | 69 |
| PdmI | GAANNNNTTC | 1 cut(s) | 267 |
| PkrI | GCNGC | 2 cut(s) | 399, 451 |
| PleI | GAGTC | 1 cut(s) | 54 |
| PpsI | GAGTC | 1 cut(s) | 54 |
| Psp6I | CCWGG | 1 cut(s) | 379 |
| PspGI | CCWGG | 1 cut(s) | 379 |
| PspPI | GGNCC | 2 cut(s) | 4, 383 |
| PstI | CTGCAG | 1 cut(s) | 454 |
| RsaI | GTAC | 3 cut(s) | 212, 365, 456 |
| RsaNI | GTAC | 3 cut(s) | 211, 364, 455 |
| SatI | GCNGC | 2 cut(s) | 398, 450 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| Sau96I | GGNCC | 2 cut(s) | 4, 383 |
| SchI | GAGTC | 1 cut(s) | 55 |
| ScrFI | CCNGG | 1 cut(s) | 381 |
| SetI | ASST | 4 cut(s) | 58, 212, 342, 436 |
| SfcI | CTRYAG | 3 cut(s) | 240, 450, 467 |
| SinI | GGWCC | 2 cut(s) | 4, 383 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| Sse9I | AATT | 3 cut(s) | 35, 133, 460 |
| SsiI | CCGC | 2 cut(s) | 7, 398 |
| StyD4I | CCNGG | 1 cut(s) | 379 |
| TaaI | ACNGT | 1 cut(s) | 199 |
| TasI | AATT | 3 cut(s) | 35, 133, 460 |
| TatI | WGTACW | 1 cut(s) | 454 |
| TauI | GCSGC | 1 cut(s) | 400 |
| TscAI | CASTG | 1 cut(s) | 204 |
| TseI | GCWGC | 1 cut(s) | 449 |
| TspDTI | ATGAA | 3 cut(s) | 92, 171, 317 |
| TspRI | CASTG | 1 cut(s) | 204 |
| VpaK11BI | GGWCC | 2 cut(s) | 4, 383 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 118 |
| XapI | RAATTY | 1 cut(s) | 133 |
| XmnI | GAANNNNTTC | 1 cut(s) | 267 |