ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 224, 339 |
| AclWI | GGATC | 3 cut(s) | 72, 271, 758 |
| AcsI | RAATTY | 3 cut(s) | 6, 166, 728 |
| AfaI | GTAC | 1 cut(s) | 595 |
| AgsI | TTSAA | 8 cut(s) | 61, 370, 680, 727, 734, 818, 959, 992 |
| AjnI | CCWGG | 1 cut(s) | 289 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1002, 1034 |
| AluBI | AGCT | 3 cut(s) | 15, 138, 299 |
| AluI | AGCT | 3 cut(s) | 15, 138, 299 |
| Alw26I | GTCTC | 1 cut(s) | 408 |
| AlwI | GGATC | 3 cut(s) | 72, 271, 758 |
| AoxI | GGCC | 1 cut(s) | 707 |
| ApoI | RAATTY | 3 cut(s) | 6, 166, 728 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 485 |
| AspA2I | CCTAGG | 1 cut(s) | 154 |
| AspS9I | GGNCC | 1 cut(s) | 287 |
| AsuHPI | GGTGA | 3 cut(s) | 64, 392, 643 |
| AsuII | TTCGAA | 2 cut(s) | 244, 910 |
| AvaII | GGWCC | 1 cut(s) | 287 |
| AvrII | CCTAGG | 1 cut(s) | 154 |
| AxyI | CCTNAGG | 1 cut(s) | 236 |
| BccI | CCATC | 3 cut(s) | 182, 446, 607 |
| BceAI | ACGGC | 1 cut(s) | 480 |
| BciT130I | CCWGG | 1 cut(s) | 291 |
| BclI | TGATCA | 2 cut(s) | 349, 658 |
| BcoDI | GTCTC | 1 cut(s) | 408 |
| BfaI | CTAG | 5 cut(s) | 155, 518, 540, 648, 755 |
| BfmI | CTRYAG | 1 cut(s) | 945 |
| BlnI | CCTAGG | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 1 cut(s) | 291 |
| Bme18I | GGWCC | 1 cut(s) | 287 |
| BmgT120I | GGNCC | 1 cut(s) | 287 |
| BmiI | GGNNCC | 1 cut(s) | 288 |
| BmrFI | CCNGG | 1 cut(s) | 291 |
| BmsI | GCATC | 2 cut(s) | 154, 769 |
| BpmI | CTGGAG | 2 cut(s) | 238, 941 |
| Bpu14I | TTCGAA | 2 cut(s) | 244, 910 |
| BsaBI | GATNNNNATC | 2 cut(s) | 348, 657 |
| BsaJI | CCNNGG | 3 cut(s) | 154, 280, 398 |
| Bse1I | ACTGG | 2 cut(s) | 924, 936 |
| Bse21I | CCTNAGG | 1 cut(s) | 236 |
| Bse3DI | GCAATG | 1 cut(s) | 43 |
| Bse8I | GATNNNNATC | 2 cut(s) | 348, 657 |
| BseBI | CCWGG | 1 cut(s) | 291 |
| BseDI | CCNNGG | 3 cut(s) | 154, 280, 398 |
| BseGI | GGATG | 1 cut(s) | 784 |
| BseJI | GATNNNNATC | 2 cut(s) | 348, 657 |
| BseMI | GCAATG | 1 cut(s) | 43 |
| BseMII | CTCAG | 4 cut(s) | 173, 227, 445, 783 |
| BseNI | ACTGG | 2 cut(s) | 924, 936 |
| BseRI | GAGGAG | 2 cut(s) | 938, 977 |
| BsgI | GTGCAG | 1 cut(s) | 240 |
| BshFI | GGCC | 1 cut(s) | 709 |
| BslFI | GGGAC | 3 cut(s) | 300, 650, 988 |
| BsmAI | GTCTC | 1 cut(s) | 408 |
| BsmFI | GGGAC | 3 cut(s) | 300, 650, 988 |
| BsmI | GAATGC | 1 cut(s) | 252 |
| BsnI | GGCC | 1 cut(s) | 709 |
| Bsp119I | TTCGAA | 2 cut(s) | 244, 910 |
| Bsp143I | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| Bsp19I | CCATGG | 1 cut(s) | 280 |
| BspACI | CCGC | 2 cut(s) | 224, 339 |
| BspANI | GGCC | 1 cut(s) | 709 |
| BspCNI | CTCAG | 4 cut(s) | 174, 228, 444, 784 |
| BspLI | GGNNCC | 1 cut(s) | 288 |
| BspPI | GGATC | 3 cut(s) | 72, 271, 758 |
| BspT104I | TTCGAA | 2 cut(s) | 244, 910 |
| BsrDI | GCAATG | 1 cut(s) | 43 |
| BsrI | ACTGG | 2 cut(s) | 924, 936 |
| BssECI | CCNNGG | 3 cut(s) | 154, 280, 398 |
| BssMI | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| BssT1I | CCWWGG | 3 cut(s) | 154, 280, 398 |
| Bst2UI | CCWGG | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 3 cut(s) | 366, 509, 949 |
| BstBI | TTCGAA | 2 cut(s) | 244, 910 |
| BstC8I | GCNNGC | 2 cut(s) | 301, 305 |
| BstDEI | CTNAG | 6 cut(s) | 11, 182, 236, 431, 572, 792 |
| BstDSI | CCRYGG | 1 cut(s) | 280 |
| BstF5I | GGATG | 1 cut(s) | 784 |
| BstKTI | GATC | 8 cut(s) | 67, 254, 279, 346, 352, 583, 661, 766 |
| BstMAI | GTCTC | 1 cut(s) | 408 |
| BstMBI | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 21, 247, 338 |
| BstNI | CCWGG | 1 cut(s) | 291 |
| BstSCI | CCNGG | 1 cut(s) | 289 |
| BstSFI | CTRYAG | 1 cut(s) | 945 |
| BstX2I | RGATCY | 2 cut(s) | 64, 276 |
| BstYI | RGATCY | 2 cut(s) | 64, 276 |
| Bsu36I | CCTNAGG | 1 cut(s) | 236 |
| BsuRI | GGCC | 1 cut(s) | 709 |
| BtgI | CCRYGG | 1 cut(s) | 280 |
| BtgZI | GCGATG | 1 cut(s) | 453 |
| BtsCI | GGATG | 1 cut(s) | 784 |
| BtsIMutI | CAGTG | 1 cut(s) | 954 |
| Cac8I | GCNNGC | 2 cut(s) | 301, 305 |
| Cfr13I | GGNCC | 1 cut(s) | 287 |
| CseI | GACGC | 1 cut(s) | 278 |
| Csp6I | GTAC | 1 cut(s) | 594 |
| CviAII | CATG | 5 cut(s) | 281, 329, 357, 549, 662 |
| CviQI | GTAC | 1 cut(s) | 594 |
| DdeI | CTNAG | 6 cut(s) | 11, 182, 236, 431, 572, 792 |
| DpnI | GATC | 8 cut(s) | 66, 253, 278, 345, 351, 582, 660, 765 |
| DpnII | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| Eco130I | CCWWGG | 3 cut(s) | 154, 280, 398 |
| Eco32I | GATATC | 1 cut(s) | 884 |
| Eco47I | GGWCC | 1 cut(s) | 287 |
| Eco81I | CCTNAGG | 1 cut(s) | 236 |
| EcoRI | GAATTC | 1 cut(s) | 166 |
| EcoRII | CCWGG | 1 cut(s) | 289 |
| EcoRV | GATATC | 1 cut(s) | 884 |
| EcoT14I | CCWWGG | 3 cut(s) | 154, 280, 398 |
| ErhI | CCWWGG | 3 cut(s) | 154, 280, 398 |
| FaeI | CATG | 5 cut(s) | 284, 332, 360, 552, 665 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 859, 891 |
| FaqI | GGGAC | 3 cut(s) | 300, 650, 988 |
| FatI | CATG | 5 cut(s) | 280, 328, 356, 548, 661 |
| FbaI | TGATCA | 2 cut(s) | 349, 658 |
| FokI | GGATG | 1 cut(s) | 791 |
| FspBI | CTAG | 5 cut(s) | 155, 518, 540, 648, 755 |
| GsuI | CTGGAG | 2 cut(s) | 238, 941 |
| HaeIII | GGCC | 1 cut(s) | 709 |
| HgaI | GACGC | 1 cut(s) | 278 |
| Hin1II | CATG | 5 cut(s) | 284, 332, 360, 552, 665 |
| HincII | GTYRAC | 1 cut(s) | 232 |
| HindII | GTYRAC | 1 cut(s) | 232 |
| HinfI | GANTC | 8 cut(s) | 389, 427, 634, 653, 723, 734, 805, 935 |
| HphI | GGTGA | 3 cut(s) | 64, 392, 643 |
| Hpy166II | GTNNAC | 1 cut(s) | 232 |
| Hpy188I | TCNGA | 6 cut(s) | 165, 183, 413, 562, 620, 658 |
| Hpy188III | TCNNGA | 6 cut(s) | 217, 347, 490, 755, 826, 959 |
| Hpy8I | GTNNAC | 1 cut(s) | 232 |
| HpyAV | CCTTC | 4 cut(s) | 55, 364, 487, 1004 |
| HpyCH4III | ACNGT | 3 cut(s) | 366, 509, 949 |
| HpyCH4V | TGCA | 6 cut(s) | 24, 36, 145, 257, 626, 689 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 21, 247, 338 |
| HpyF3I | CTNAG | 6 cut(s) | 11, 182, 236, 431, 572, 792 |
| Hsp92II | CATG | 5 cut(s) | 284, 332, 360, 552, 665 |
| Ksp22I | TGATCA | 2 cut(s) | 349, 658 |
| Kzo9I | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| LweI | GCATC | 2 cut(s) | 154, 769 |
| MaeI | CTAG | 5 cut(s) | 155, 518, 540, 648, 755 |
| MaeIII | GTNAC | 4 cut(s) | 393, 631, 744, 927 |
| MalI | GATC | 8 cut(s) | 66, 253, 278, 345, 351, 582, 660, 765 |
| MboI | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| MboII | GAAGA | 3 cut(s) | 140, 457, 979 |
| MfeI | CAATTG | 1 cut(s) | 992 |
| MflI | RGATCY | 2 cut(s) | 64, 276 |
| MluCI | AATT | 7 cut(s) | 6, 19, 166, 690, 728, 846, 992 |
| MlyI | GAGTC | 3 cut(s) | 383, 628, 929 |
| MroXI | GAANNNNTTC | 1 cut(s) | 485 |
| MseI | TTAA | 3 cut(s) | 311, 420, 1048 |
| MslI | CAYNNNNRTG | 1 cut(s) | 604 |
| MspR9I | CCNGG | 1 cut(s) | 291 |
| MunI | CAATTG | 1 cut(s) | 992 |
| Mva1269I | GAATGC | 1 cut(s) | 252 |
| MvaI | CCWGG | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 21, 247, 338 |
| NcoI | CCATGG | 1 cut(s) | 280 |
| NdeII | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| NlaIII | CATG | 5 cut(s) | 284, 332, 360, 552, 665 |
| NlaIV | GGNNCC | 1 cut(s) | 288 |
| NmuCI | GTSAC | 1 cut(s) | 631 |
| NspV | TTCGAA | 2 cut(s) | 244, 910 |
| PctI | GAATGC | 1 cut(s) | 252 |
| PdmI | GAANNNNTTC | 1 cut(s) | 485 |
| PfeI | GAWTC | 5 cut(s) | 427, 653, 723, 734, 805 |
| PleI | GAGTC | 3 cut(s) | 383, 628, 929 |
| PpsI | GAGTC | 3 cut(s) | 383, 628, 929 |
| Psp6I | CCWGG | 1 cut(s) | 289 |
| PspGI | CCWGG | 1 cut(s) | 289 |
| PspN4I | GGNNCC | 1 cut(s) | 288 |
| PspPI | GGNCC | 1 cut(s) | 287 |
| PsuI | RGATCY | 2 cut(s) | 64, 276 |
| RsaI | GTAC | 1 cut(s) | 595 |
| RsaNI | GTAC | 1 cut(s) | 594 |
| RseI | CAYNNNNRTG | 1 cut(s) | 604 |
| SaqAI | TTAA | 3 cut(s) | 311, 420, 1048 |
| Sau3AI | GATC | 8 cut(s) | 64, 251, 276, 343, 349, 580, 658, 763 |
| Sau96I | GGNCC | 1 cut(s) | 287 |
| SchI | GAGTC | 3 cut(s) | 383, 628, 929 |
| ScrFI | CCNGG | 1 cut(s) | 291 |
| SetI | ASST | 9 cut(s) | 17, 140, 180, 237, 301, 400, 578, 1015, 1040 |
| SfaNI | GCATC | 2 cut(s) | 154, 769 |
| SfcI | CTRYAG | 1 cut(s) | 945 |
| SfuI | TTCGAA | 2 cut(s) | 244, 910 |
| SinI | GGWCC | 1 cut(s) | 287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 604 |
| Sse9I | AATT | 7 cut(s) | 6, 19, 166, 690, 728, 846, 992 |
| SsiI | CCGC | 2 cut(s) | 224, 339 |
| SspMI | CTAG | 5 cut(s) | 155, 518, 540, 648, 755 |
| StyD4I | CCNGG | 1 cut(s) | 289 |
| StyI | CCWWGG | 3 cut(s) | 154, 280, 398 |
| TaaI | ACNGT | 3 cut(s) | 366, 509, 949 |
| TaqI | TCGA | 4 cut(s) | 244, 334, 844, 910 |
| TasI | AATT | 7 cut(s) | 6, 19, 166, 690, 728, 846, 992 |
| TatI | WGTACW | 1 cut(s) | 593 |
| TfiI | GAWTC | 5 cut(s) | 427, 653, 723, 734, 805 |
| Tru1I | TTAA | 3 cut(s) | 311, 420, 1048 |
| Tru9I | TTAA | 3 cut(s) | 311, 420, 1048 |
| TscAI | CASTG | 1 cut(s) | 954 |
| TseFI | GTSAC | 1 cut(s) | 631 |
| Tsp45I | GTSAC | 1 cut(s) | 631 |
| TspDTI | ATGAA | 1 cut(s) | 494 |
| TspRI | CASTG | 1 cut(s) | 954 |
| VpaK11BI | GGWCC | 1 cut(s) | 287 |
| XapI | RAATTY | 3 cut(s) | 6, 166, 728 |
| XbaI | TCTAGA | 1 cut(s) | 754 |
| XmaJI | CCTAGG | 1 cut(s) | 154 |
| XmnI | GAANNNNTTC | 1 cut(s) | 485 |
| XspI | CTAG | 5 cut(s) | 155, 518, 540, 648, 755 |