Rorug03G0184200

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
15882035 .. 15890095
8061 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0184200.1

Sequence Viewer

Length: 2544 bp
ATGGAAATGCCCAGTAGGAGATCGAACTACACGCTTCTCAGCCAAGTCCCCGACGATCACTTCGCGGCGACGACGGCGACGTCGTTTTACGAGTCGGAGGGGAAGAACAACAATAATAAGGCGAAGGGGGATAGCAGAGGGTTTGATTGGGAAACGGGAGGCCCCGAGTACCGGGCGGCGCCGGCGAATCGGATCGGAAACGTGTACTCGTCGGTCGGATTGCAGCGGCAGTCGAGCGGGAGCAGCTTCGGAGGGAGCTCGCTGTCCGGCGAGTACTACGCGCCGACTCTGTCGACCACGGCGGCGAATGAGATTGACGGATTCGGGTACGTCAACGACGACGGGTTTAAAACCGGCGGAGGAGGCGGTGAGTTCAGAGGGAAAGGAGGAGGGATGGATGGGGCTGTGGGCCCCCCCGGAGGTTCGTCGTCGGGGAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTGGCTTTGGCGCTTCGGCTCTCGTCGGAAGCCACTTGCGCCGATGATCCTAATTTCTTGGATCGAGTGCCGGATGAATCTTCGTCGAGGTCGTCCAGCTCTGCCGATGCAGTTTCGCATCGATTTTGGGTGAATGGCTGTCTGTCATACTTTGACAAAGTGCCTGATGGGTTTTACCTTATTCATGGGATAGATTCGTATGTATGGTCTATGTGCACTGATGTGCAAGAGAGTGGTCGTATACCATCAATTGAATCACTAAGATCTGTTGATCCTGGTACTGGATCTTCCATAGAAGTGGTCTTAATCGATCGACGTAGTGATCCCAGCTTAAAGGAGCTTCAAAATAGGGTCGTCAGCATTTCTTGTGCTTGCATAACCACGACAGAGATTGTTGATCAGCTGGCAAAGCTTGTATGCAGCCGTATGGGGGGTTCAGCATCTGTAGGAGAGGCTGAATTTTTCTCCATATGGAGGGAGAGCAGTGATGATCTAAAAGATTGCTTAGGATCTGTAGTTGTTCCAATCGGCAGCCTTTCTATTGGCCTCTGTAGACATCGTGCTTTATTATTCAAGGTTCTAGCTGACACGATTGACCTACCGTGCCGAATTGCCAAAGGCTGTAAATATTGTACAAGAGATGATGCTTCCTCTTGTCTTGTTCGTTTTGGTAGTGACAGGGAATTGTTAGTTGATTTGATTGGGAATCCAGGTTGCTTATGTGAGCCTGATTCCTTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCGCTGCGGTTTCCAAGACTCAGAACAGTTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTACTTCTCGGACTGTCAGTTGCTTAATCTTGTATTCGATGAAGCTCCGGCAGGAAGTGCTGGTGATGAGGACAATAAAGGATTCTCTATTTATCCTAAGCAGAAGTTTACAGATGGAAACAACCTCTTTCTGGTTTCAGGTCTTGGTGATGACACTTCTATGCATGTTGACGATCGGAATCCCCAGTTCCTTAAATCATTTAATCCTTCTCAAAACATTGTACACCAACAAACAGTATTAAAAGATCAAATCCCCCTAAAGCGTATACCGCCTATAGGACATAGAGATATTTCAAGGTTGGATACAAGTAAGGACTCGAGGTTTAGTGAGGGACTTCAAGTGGTTCCTAGTAAACCAAATAAAGAGCTGACTCTCGATGTGGATGATTTGGACATTCCATGGAGTGACCTTGTACTGAAGGAGAGAATCGGTGCAGGTTCTTTTGGAACTGTTCATCGTGCTGATTGGCATGGCTCTGATGTTGCTGTGAAGATTCTTATGGAGCAAGAATTTCATGCTGAACGCTTTAAAGAGTTCTTGAGGGAGGTTACAATTATGAAACGCCTGCGGCATCCAAATATTGTGCTGTTTATGGGTGCAGTTACAAAGCCCCCAAACTTATCCATAGTCACAGAATATCTATCAAGAGGGAGCTTGTATAGGCTGTTGCATAAACCTGGCCCAATGCTGGATGAGAGGCGCCGTTTGAATATGGCTCATGATGTGGCAAAGGGGATGAATTATCTTCATAGGCGGAATCCTCCCATTGTTCATCGAGATTTAAAATCGCCAAACCTTTTGGTTGACAAAAAGTATACTGTGAAGGTTTGTGATTTTGGTCTTTCCCGATTAAAGGCCAACACCTTTCTTTCATCAAAATCAGCTGCAGGGACTCCTGAATGGATGGCACCAGAAGTCCTGCGTGATGAACCATCAAATGAGAAGTCAGATGTTTACAGTTTTGGTGTAATATTGTGGGAACTTGCGACATTGCAACAGCCCTGGGGTAATTTGAATCCAGCGCAGGTTGTGGCAGCTGTTGGTTTTAAGAACAAAAGGCTTGAGATTCCACGTGATTTGAATCCTCAAGTGGCTTCTATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGACCTTCATTTGCTAGTATCATGGAATCTTTGAGGCCATTGATTAAAGCTCCCACACCTCAACCTAGTCATGCAGACATGCCGATACTCACCTGA

Protein Analysis

847

Amino Acids

93.16

Weight (kDa)

5.9

Isoelectric Point (pI)

47.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 194 - 400 1.3e-82 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 576 - 827 1.9e-70 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 577 - 825 1.8e-55 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 79
AatII GACGTC 1 cut(s) 83
Acc36I ACCTGC 2 cut(s) 1739, 2329
AccB1I GGYRCC 3 cut(s) 178, 2013, 2221
AccBSI CCGCTC 1 cut(s) 237
AccI GTMKAC 5 cut(s) 293, 718, 1030, 1579, 2129
AccII CGCG 2 cut(s) 65, 281
AclWI GGATC 7 cut(s) 200, 518, 546, 743, 769, 794, 994
AcoI YGGCCR 1 cut(s) 1305
AcsI RAATTY 2 cut(s) 935, 1823
AcuI CTGAAG 1 cut(s) 1751
AcvI CACGTG 1 cut(s) 2387
AcyI GRCGYC 3 cut(s) 80, 179, 2014
AfaI GTAC 9 cut(s) 170, 206, 275, 329, 757, 1111, 1316, 1536, 1728
AfiI CCNNNNNNNGG 9 cut(s) 171, 419, 758, 907, 951, 1444, 1589, 2002, 2167
AflIII ACRYGT 1 cut(s) 201
AgsI TTSAA 9 cut(s) 731, 821, 1051, 1280, 1608, 1652, 2023, 2329, 2395
AjnI CCWGG 5 cut(s) 751, 1186, 1990, 2315, 2441
AjuI GAANNNNNNNTTGG 2 cut(s) 1301, 1333
AleI CACNNNNGTG 1 cut(s) 698
Alw21I GWGCWC 2 cut(s) 260, 695
Alw44I GTGCAC 1 cut(s) 691
AlwI GGATC 7 cut(s) 200, 518, 546, 743, 769, 794, 994
AlwNI CAGNNNCTG 1 cut(s) 920
Ama87I CYCGRG 2 cut(s) 164, 1630
AoxI GGCC 8 cut(s) 160, 409, 1021, 1305, 1993, 2169, 2430, 2483
ApaI GGGCCC 1 cut(s) 413
ApaLI GTGCAC 1 cut(s) 691
ApeKI GCWGC 9 cut(s) 223, 243, 448, 472, 897, 1008, 1252, 2198, 2348
ApoI RAATTY 2 cut(s) 935, 1823
ArsI GACNNNNNNTTYG 4 cut(s) 44, 76, 2243, 2275
AspLEI GCGC 7 cut(s) 181, 283, 448, 490, 518, 2016, 2338
AspS9I GGNCC 6 cut(s) 161, 409, 410, 1223, 1994, 2430
AsuC2I CCSGG 2 cut(s) 173, 417
AsuHPI GGTGA 6 cut(s) 380, 619, 1239, 1388, 1472, 2530
AvaI CYCGRG 2 cut(s) 164, 1630
AvaII GGWCC 1 cut(s) 1223
BaeGI GKGCMC 2 cut(s) 413, 695
BalI TGGCCA 1 cut(s) 1307
BanI GGYRCC 3 cut(s) 178, 2013, 2221
BanII GRGCYC 3 cut(s) 260, 413, 2442
BarI GAAGNNNNNNTAC 2 cut(s) 748, 780
BbrPI CACGTG 1 cut(s) 2387
Bbv12I GWGCWC 2 cut(s) 260, 695
BbvI GCAGC 9 cut(s) 235, 255, 459, 460, 909, 1020, 1239, 2185, 2360
BccI CCATC 9 cut(s) 388, 392, 638, 730, 1234, 1241, 1421, 2212, 2254
BceAI ACGGC 4 cut(s) 90, 315, 885, 2001
BciT130I CCWGG 5 cut(s) 753, 1188, 1992, 2317, 2443
BciVI GTATCC 1 cut(s) 1609
BclI TGATCA 1 cut(s) 874
BcnI CCSGG 2 cut(s) 173, 417
BfaI CTAG 4 cut(s) 1058, 1662, 2463, 2514
BfmI CTRYAG 6 cut(s) 473, 921, 990, 1027, 1587, 2199
BfoI RGCGCY 3 cut(s) 182, 491, 2017
BfuAI ACCTGC 2 cut(s) 1739, 2329
BfuI GTATCC 1 cut(s) 1609
BglII AGATCT 1 cut(s) 740
BmcAI AGTACT 2 cut(s) 275, 1316
Bme1390I CCNGG 7 cut(s) 173, 417, 753, 1188, 1992, 2317, 2443
Bme18I GGWCC 1 cut(s) 1223
BmeT110I CYCGRG 2 cut(s) 164, 1630
BmgT120I GGNCC 6 cut(s) 161, 409, 410, 1223, 1994, 2430
BmiI GGNNCC 7 cut(s) 163, 180, 411, 412, 1659, 2015, 2223
BmrFI CCNGG 7 cut(s) 173, 417, 753, 1188, 1992, 2317, 2443
BmrI ACTGGG 2 cut(s) 6, 1492
BmsI GCATC 5 cut(s) 574, 604, 926, 1111, 1894
BmuI ACTGGG 2 cut(s) 6, 1492
Bpu10I CCTNAGC 2 cut(s) 982, 1410
BpuEI CTTGAG 3 cut(s) 1873, 2385, 2396
BpuMI CCSGG 2 cut(s) 173, 417
Bsa29I ATCGAT 2 cut(s) 598, 786
BsaAI YACGTR 1 cut(s) 2387
BsaBI GATNNNNATC 2 cut(s) 1491, 2394
BsaHI GRCGYC 3 cut(s) 80, 179, 2014
BsaJI CCNNGG 6 cut(s) 297, 415, 1712, 2315, 2316, 2441
Bsc4I CCNNNNNNNGG 9 cut(s) 171, 419, 758, 907, 951, 1444, 1589, 2002, 2167
Bse118I RCCGGY 2 cut(s) 181, 353
Bse1I ACTGG 4 cut(s) 12, 763, 1308, 1498
Bse3DI GCAATG 1 cut(s) 2303
Bse8I GATNNNNATC 2 cut(s) 1491, 2394
BseBI CCWGG 5 cut(s) 753, 1188, 1992, 2317, 2443
BseCI ATCGAT 2 cut(s) 598, 786
BseDI CCNNGG 6 cut(s) 297, 415, 1712, 2315, 2316, 2441
BseGI GGATG 9 cut(s) 399, 403, 556, 1229, 1702, 1885, 2011, 2055, 2223
BseJI GATNNNNATC 2 cut(s) 1491, 2394
BseLI CCNNNNNNNGG 9 cut(s) 171, 419, 758, 907, 951, 1444, 1589, 2002, 2167
BseMI GCAATG 1 cut(s) 2303
BseMII CTCAG 3 cut(s) 52, 447, 1282
BseNI ACTGG 4 cut(s) 12, 763, 1308, 1498
BseRI GAGGAG 3 cut(s) 375, 402, 473
BseSI GKGCMC 2 cut(s) 413, 695
BseXI GCAGC 9 cut(s) 235, 255, 459, 460, 909, 1020, 1239, 2185, 2360
BseYI CCCAGC 3 cut(s) 441, 803, 2427
BsgI GTGCAG 2 cut(s) 1767, 1932
Bsh1236I CGCG 2 cut(s) 65, 281
Bsh1285I CGRYCG 3 cut(s) 216, 790, 1489
BshFI GGCC 8 cut(s) 162, 411, 1023, 1307, 1995, 2171, 2432, 2485
BshNI GGYRCC 3 cut(s) 178, 2013, 2221
BshVI ATCGAT 2 cut(s) 598, 786
BsiEI CGRYCG 3 cut(s) 216, 790, 1489
BsiHKAI GWGCWC 2 cut(s) 260, 695
BsiHKCI CYCGRG 2 cut(s) 164, 1630
BsiSI CCGG 7 cut(s) 172, 182, 267, 354, 417, 548, 1361
BslFI GGGAC 3 cut(s) 32, 1659, 2218
BslI CCNNNNNNNGG 9 cut(s) 171, 419, 758, 907, 951, 1444, 1589, 2002, 2167
BsmFI GGGAC 3 cut(s) 32, 1659, 2218
BsnI GGCC 8 cut(s) 162, 411, 1023, 1307, 1995, 2171, 2432, 2485
BsoBI CYCGRG 2 cut(s) 164, 1630
Bsp120I GGGCCC 1 cut(s) 409
Bsp1286I GDGCHC 4 cut(s) 260, 413, 695, 2442
Bsp1407I TGTACA 2 cut(s) 1109, 1534
Bsp19I CCATGG 1 cut(s) 1712
BspANI GGCC 8 cut(s) 162, 411, 1023, 1307, 1995, 2171, 2432, 2485
BspCNI CTCAG 3 cut(s) 51, 448, 1281
BspDI ATCGAT 2 cut(s) 598, 786
BspFNI CGCG 2 cut(s) 65, 281
BspHI TCATGA 1 cut(s) 2032
BspLI GGNNCC 7 cut(s) 163, 180, 411, 412, 1659, 2015, 2223
BspMAI CTGCAG 2 cut(s) 477, 2203
BspMI ACCTGC 2 cut(s) 1739, 2329
BspPI GGATC 7 cut(s) 200, 518, 546, 743, 769, 794, 994
BspQI GCTCTTC 1 cut(s) 431
BspT107I GGYRCC 3 cut(s) 178, 2013, 2221
BsrBI CCGCTC 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 2303
BsrFI RCCGGY 2 cut(s) 181, 353
BsrGI TGTACA 2 cut(s) 1109, 1534
BsrI ACTGG 4 cut(s) 12, 763, 1308, 1498
BssAI RCCGGY 2 cut(s) 181, 353
BssECI CCNNGG 6 cut(s) 297, 415, 1712, 2315, 2316, 2441
BssNAI GTATAC 3 cut(s) 719, 1580, 2130
BssNI GRCGYC 3 cut(s) 80, 179, 2014
BssT1I CCWWGG 1 cut(s) 1712
Bst1107I GTATAC 3 cut(s) 719, 1580, 2130
Bst2UI CCWGG 5 cut(s) 753, 1188, 1992, 2317, 2443
Bst4CI ACNGT 8 cut(s) 1080, 1276, 1314, 1328, 1549, 1765, 2134, 2273
Bst6I CTCTTC 1 cut(s) 431
BstACI GRCGYC 3 cut(s) 80, 179, 2014
BstAPI GCANNNNNTGC 1 cut(s) 1370
BstAUI TGTACA 2 cut(s) 1109, 1534
BstBAI YACGTR 1 cut(s) 2387
BstC8I GCNNGC 6 cut(s) 183, 260, 850, 882, 1880, 2425
BstDEI CTNAG 6 cut(s) 38, 456, 737, 982, 1268, 1410
BstDSI CCRYGG 2 cut(s) 297, 1712
BstF5I GGATG 9 cut(s) 399, 403, 556, 1229, 1702, 1885, 2011, 2055, 2223
BstFNI CGCG 2 cut(s) 65, 281
BstH2I RGCGCY 3 cut(s) 182, 491, 2017
BstHHI GCGC 7 cut(s) 181, 283, 448, 490, 518, 2016, 2338
BstMCI CGRYCG 3 cut(s) 216, 790, 1489
BstMWI GCNNNNNNNGC 9 cut(s) 74, 182, 243, 363, 515, 886, 1370, 1582, 2429
BstNI CCWGG 5 cut(s) 753, 1188, 1992, 2317, 2443
BstNSI RCATGY 2 cut(s) 1481, 2530
BstSCI CCNGG 7 cut(s) 171, 415, 751, 1186, 1990, 2315, 2441
BstSFI CTRYAG 6 cut(s) 473, 921, 990, 1027, 1587, 2199
BstSLI GKGCMC 2 cut(s) 413, 695
BstUI CGCG 2 cut(s) 65, 281
BstV1I GCAGC 9 cut(s) 235, 255, 459, 460, 909, 1020, 1239, 2185, 2360
BstX2I RGATCY 3 cut(s) 740, 761, 986
BstXI CCANNNNNNTGG 1 cut(s) 775
BstYI RGATCY 3 cut(s) 740, 761, 986
BstZ17I GTATAC 3 cut(s) 719, 1580, 2130
Bsu15I ATCGAT 2 cut(s) 598, 786
BsuI GTATCC 1 cut(s) 1609
BsuRI GGCC 8 cut(s) 162, 411, 1023, 1307, 1995, 2171, 2432, 2485
BsuTUI ATCGAT 2 cut(s) 598, 786
BtgI CCRYGG 2 cut(s) 297, 1712
BtsCI GGATG 9 cut(s) 399, 403, 556, 1229, 1702, 1885, 2011, 2055, 2223
BtsI GCAGTG 1 cut(s) 967
BtsIMutI CAGTG 3 cut(s) 693, 967, 1301
BveI ACCTGC 2 cut(s) 1739, 2329
Cac8I GCNNGC 6 cut(s) 183, 260, 850, 882, 1880, 2425
CaiI CAGNNNCTG 1 cut(s) 920
CciI TCATGA 1 cut(s) 2032
CfoI GCGC 7 cut(s) 181, 283, 448, 490, 518, 2016, 2338
Cfr10I RCCGGY 2 cut(s) 181, 353
Cfr13I GGNCC 6 cut(s) 161, 409, 410, 1223, 1994, 2430
ClaI ATCGAT 2 cut(s) 598, 786
Csp6I GTAC 9 cut(s) 169, 205, 274, 328, 756, 1110, 1315, 1535, 1727
CspCI CAANNNNNGTGG 2 cut(s) 2373, 2408
CviAII CATG 9 cut(s) 662, 1478, 1713, 1784, 1829, 2033, 2470, 2519, 2527
CviQI GTAC 9 cut(s) 169, 205, 274, 328, 756, 1110, 1315, 1535, 1727
DdeI CTNAG 6 cut(s) 38, 456, 737, 982, 1268, 1410
DinI GGCGCC 2 cut(s) 180, 2015
DraI TTTAAA 3 cut(s) 349, 1843, 2097
DrdI GACNNNNNNGTC 1 cut(s) 79
DseDI GACNNNNNNGTC 1 cut(s) 79
EaeI YGGCCR 1 cut(s) 1305
Eam1104I CTCTTC 1 cut(s) 431
EarI CTCTTC 1 cut(s) 431
EciI GGCGGA 2 cut(s) 372, 2083
Ecl136II GAGCTC 1 cut(s) 258
Eco130I CCWWGG 1 cut(s) 1712
Eco24I GRGCYC 3 cut(s) 260, 413, 2442
Eco47I GGWCC 1 cut(s) 1223
Eco53kI GAGCTC 1 cut(s) 258
Eco57I CTGAAG 1 cut(s) 1751
Eco72I CACGTG 1 cut(s) 2387
Eco88I CYCGRG 2 cut(s) 164, 1630
EcoICRI GAGCTC 1 cut(s) 258
EcoO109I RGGNCCY 2 cut(s) 161, 410
EcoRII CCWGG 5 cut(s) 751, 1186, 1990, 2315, 2441
EcoT14I CCWWGG 1 cut(s) 1712
EcoT22I ATGCAT 1 cut(s) 1479
EcoT38I GRGCYC 3 cut(s) 260, 413, 2442
EgeI GGCGCC 2 cut(s) 180, 2015
EheI GGCGCC 2 cut(s) 180, 2015
ErhI CCWWGG 1 cut(s) 1712
FaeI CATG 9 cut(s) 665, 1481, 1716, 1787, 1832, 2036, 2473, 2522, 2530
FaqI GGGAC 3 cut(s) 32, 1659, 2218
FatI CATG 9 cut(s) 661, 1477, 1712, 1783, 1828, 2032, 2469, 2518, 2526
FauI CCCGC 1 cut(s) 230
FauNDI CATATG 1 cut(s) 947
FbaI TGATCA 1 cut(s) 874
FblI GTMKAC 5 cut(s) 293, 718, 1030, 1579, 2129
FokI GGATG 9 cut(s) 406, 410, 563, 1216, 1709, 1872, 2018, 2062, 2230
FriOI GRGCYC 3 cut(s) 260, 413, 2442
FspBI CTAG 4 cut(s) 1058, 1662, 2463, 2514
GlaI GCGC 7 cut(s) 180, 282, 447, 489, 517, 2015, 2337
GsaI CCCAGC 3 cut(s) 445, 807, 2431
HaeII RGCGCY 3 cut(s) 182, 491, 2017
HaeIII GGCC 8 cut(s) 162, 411, 1023, 1307, 1995, 2171, 2432, 2485
HapII CCGG 7 cut(s) 172, 182, 267, 354, 417, 548, 1361
HhaI GCGC 7 cut(s) 181, 283, 448, 490, 518, 2016, 2338
Hin1I GRCGYC 3 cut(s) 80, 179, 2014
Hin1II CATG 9 cut(s) 665, 1481, 1716, 1787, 1832, 2036, 2473, 2522, 2530
Hin6I GCGC 7 cut(s) 179, 281, 446, 488, 516, 2014, 2336
HinP1I GCGC 7 cut(s) 179, 281, 446, 488, 516, 2014, 2336
HincII GTYRAC 4 cut(s) 294, 334, 1483, 2119
HindII GTYRAC 4 cut(s) 294, 334, 1483, 2119
HindIII AAGCTT 1 cut(s) 887
HpaII CCGG 7 cut(s) 172, 182, 267, 354, 417, 548, 1361
HphI GGTGA 6 cut(s) 380, 619, 1239, 1388, 1472, 2530
Hpy188III TCNNGA 7 cut(s) 1688, 1852, 1959, 2033, 2090, 2160, 2210
HpyAV CCTTC 5 cut(s) 118, 1530, 1726, 2131, 2463
HpyCH4III ACNGT 8 cut(s) 1080, 1276, 1314, 1328, 1549, 1765, 2134, 2273
HpyCH4IV ACGT 5 cut(s) 80, 201, 330, 793, 2386
HpyF10VI GCNNNNNNNGC 9 cut(s) 74, 182, 243, 363, 515, 886, 1370, 1582, 2429
HpyF3I CTNAG 6 cut(s) 38, 456, 737, 982, 1268, 1410
HpySE526I ACGT 5 cut(s) 80, 201, 330, 793, 2386
Hsp92I GRCGYC 3 cut(s) 80, 179, 2014
Hsp92II CATG 9 cut(s) 665, 1481, 1716, 1787, 1832, 2036, 2473, 2522, 2530
HspAI GCGC 7 cut(s) 179, 281, 446, 488, 516, 2014, 2336
KasI GGCGCC 2 cut(s) 178, 2013
KroI GCCGGC 1 cut(s) 181
KroNI GCCGGC 1 cut(s) 183
Ksp22I TGATCA 1 cut(s) 874
LguI GCTCTTC 1 cut(s) 431
LmnI GCTCC 7 cut(s) 240, 255, 814, 1363, 1816, 1965, 2503
Lsp1109I GCAGC 9 cut(s) 235, 255, 459, 460, 909, 1020, 1239, 2185, 2360
LweI GCATC 5 cut(s) 574, 604, 926, 1111, 1894
MaeI CTAG 4 cut(s) 1058, 1662, 2463, 2514
MaeII ACGT 5 cut(s) 80, 201, 330, 793, 2386
MaeIII GTNAC 6 cut(s) 1151, 1299, 1718, 1861, 1915, 1942
MbiI CCGCTC 1 cut(s) 237
MboII GAAGA 7 cut(s) 115, 448, 549, 756, 1236, 1816, 2051
MfeI CAATTG 1 cut(s) 726
MflI RGATCY 3 cut(s) 740, 761, 986
MhlI GDGCHC 4 cut(s) 260, 413, 695, 2442
MlsI TGGCCA 1 cut(s) 1307
MluNI TGGCCA 1 cut(s) 1307
Mly113I GGCGCC 2 cut(s) 179, 2014
MlyI GAGTC 6 cut(s) 101, 280, 1260, 1622, 1678, 2200
MmeI TCCRAC 4 cut(s) 75, 196, 483, 1593
Mox20I TGGCCA 1 cut(s) 1307
Mph1103I ATGCAT 1 cut(s) 1479
MreI CGCCGGCG 1 cut(s) 181
MroNI GCCGGC 1 cut(s) 181
MscI TGGCCA 1 cut(s) 1307
MslI CAYNNNNRTG 3 cut(s) 698, 773, 1472
Msp20I TGGCCA 1 cut(s) 1307
MspA1I CMGCKG 6 cut(s) 226, 472, 880, 1252, 2198, 2351
MspI CCGG 7 cut(s) 172, 182, 267, 354, 417, 548, 1361
MspR9I CCNGG 7 cut(s) 173, 417, 753, 1188, 1992, 2317, 2443
MunI CAATTG 1 cut(s) 726
MvaI CCWGG 5 cut(s) 753, 1188, 1992, 2317, 2443
MvnI CGCG 2 cut(s) 65, 281
MwoI GCNNNNNNNGC 9 cut(s) 74, 182, 243, 363, 515, 886, 1370, 1582, 2429
NaeI GCCGGC 1 cut(s) 183
NarI GGCGCC 2 cut(s) 179, 2014
NciI CCSGG 2 cut(s) 173, 417
NcoI CCATGG 1 cut(s) 1712
NdeI CATATG 1 cut(s) 947
NgoMIV GCCGGC 1 cut(s) 181
NlaIII CATG 9 cut(s) 665, 1481, 1716, 1787, 1832, 2036, 2473, 2522, 2530
NlaIV GGNNCC 7 cut(s) 163, 180, 411, 412, 1659, 2015, 2223
NmuCI GTSAC 4 cut(s) 1151, 1299, 1718, 1942
NsiI ATGCAT 1 cut(s) 1479
NspI RCATGY 2 cut(s) 1481, 2530
OliI CACNNNNGTG 1 cut(s) 698
PaeR7I CTCGAG 1 cut(s) 1630
PagI TCATGA 1 cut(s) 2032
PasI CCCWGGG 1 cut(s) 2316
PciSI GCTCTTC 1 cut(s) 431
PcsI WCGNNNNNNNCGW 4 cut(s) 77, 80, 336, 566
PdiI GCCGGC 1 cut(s) 183
PflFI GACNNNGTC 1 cut(s) 289
Ple19I CGATCG 2 cut(s) 790, 1489
PleI GAGTC 6 cut(s) 100, 280, 1260, 1622, 1678, 2200
PluTI GGCGCC 2 cut(s) 182, 2017
PmaCI CACGTG 1 cut(s) 2387
PmlI CACGTG 1 cut(s) 2387
PpsI GAGTC 6 cut(s) 100, 280, 1260, 1622, 1678, 2200
Ppu21I YACGTR 1 cut(s) 2387
Psp124BI GAGCTC 1 cut(s) 260
Psp6I CCWGG 5 cut(s) 751, 1186, 1990, 2315, 2441
PspCI CACGTG 1 cut(s) 2387
PspFI CCCAGC 3 cut(s) 441, 803, 2427
PspGI CCWGG 5 cut(s) 751, 1186, 1990, 2315, 2441
PspN4I GGNNCC 7 cut(s) 163, 180, 411, 412, 1659, 2015, 2223
PspOMI GGGCCC 1 cut(s) 409
PspPI GGNCC 6 cut(s) 161, 409, 410, 1223, 1994, 2430
PspXI VCTCGAGB 1 cut(s) 1630
PsrI GAACNNNNNNTAC 2 cut(s) 895, 927
PstI CTGCAG 2 cut(s) 477, 2203
PstNI CAGNNNCTG 1 cut(s) 920
PsuI RGATCY 3 cut(s) 740, 761, 986
PsyI GACNNNGTC 1 cut(s) 289
PvuI CGATCG 2 cut(s) 790, 1489
PvuII CAGCTG 4 cut(s) 472, 880, 2198, 2351
RsaI GTAC 9 cut(s) 170, 206, 275, 329, 757, 1111, 1316, 1536, 1728
RsaNI GTAC 9 cut(s) 169, 205, 274, 328, 756, 1110, 1315, 1535, 1727
RseI CAYNNNNRTG 3 cut(s) 698, 773, 1472
SacI GAGCTC 1 cut(s) 260
SalI GTCGAC 1 cut(s) 292
SapI GCTCTTC 1 cut(s) 431
Sau96I GGNCC 6 cut(s) 161, 409, 410, 1223, 1994, 2430
ScaI AGTACT 2 cut(s) 275, 1316
SchI GAGTC 6 cut(s) 101, 280, 1260, 1622, 1678, 2200
ScrFI CCNGG 7 cut(s) 173, 417, 753, 1188, 1992, 2317, 2443
SduI GDGCHC 4 cut(s) 260, 413, 695, 2442
SfaNI GCATC 5 cut(s) 574, 604, 926, 1111, 1894
SfcI CTRYAG 6 cut(s) 473, 921, 990, 1027, 1587, 2199
SfoI GGCGCC 2 cut(s) 180, 2015
Sfr274I CTCGAG 1 cut(s) 1630
SgrAI CRCCGGYG 1 cut(s) 181
SinI GGWCC 1 cut(s) 1223
SlaI CTCGAG 1 cut(s) 1630
SmiMI CAYNNNNRTG 3 cut(s) 698, 773, 1472
SmlI CTYRAG 4 cut(s) 1630, 1852, 2375, 2400
SmoI CTYRAG 4 cut(s) 1630, 1852, 2375, 2400
SspDI GGCGCC 2 cut(s) 178, 2013
SspI AATATT 3 cut(s) 1106, 1894, 2286
SspMI CTAG 4 cut(s) 1058, 1662, 2463, 2514
SstI GAGCTC 1 cut(s) 260
StyD4I CCNGG 7 cut(s) 171, 415, 751, 1186, 1990, 2315, 2441
StyI CCWWGG 1 cut(s) 1712
TaaI ACNGT 8 cut(s) 1080, 1276, 1314, 1328, 1549, 1765, 2134, 2273
TaiI ACGT 5 cut(s) 83, 204, 333, 796, 2389
TaqII GACCGA 1 cut(s) 202
TatI WGTACW 6 cut(s) 204, 273, 1109, 1314, 1534, 1726
TauI GCSGC 5 cut(s) 68, 179, 229, 305, 1885
TscAI CASTG 3 cut(s) 700, 967, 1308
TseFI GTSAC 4 cut(s) 1151, 1299, 1718, 1942
TseI GCWGC 9 cut(s) 223, 243, 448, 472, 897, 1008, 1252, 2198, 2348
Tsp45I GTSAC 4 cut(s) 1151, 1299, 1718, 1942
TspGWI ACGGA 1 cut(s) 333
TspRI CASTG 3 cut(s) 700, 967, 1308
Tth111I GACNNNGTC 1 cut(s) 289
VneI GTGCAC 1 cut(s) 691
VpaK11BI GGWCC 1 cut(s) 1223
XapI RAATTY 2 cut(s) 935, 1823
XceI RCATGY 2 cut(s) 1481, 2530
XhoI CTCGAG 1 cut(s) 1630
XmiI GTMKAC 5 cut(s) 293, 718, 1030, 1579, 2129
XspI CTAG 4 cut(s) 1058, 1662, 2463, 2514
ZraI GACGTC 1 cut(s) 81
ZrmI AGTACT 2 cut(s) 275, 1316
Zsp2I ATGCAT 1 cut(s) 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.