disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 66 - 163 | 4.2e-17 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 421 |
| Acc65I | GGTACC | 1 cut(s) | 76 |
| AccB1I | GGYRCC | 1 cut(s) | 76 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 42 |
| AccII | CGCG | 1 cut(s) | 555 |
| AclWI | GGATC | 2 cut(s) | 139, 152 |
| AcsI | RAATTY | 1 cut(s) | 586 |
| AfaI | GTAC | 2 cut(s) | 78, 232 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 42, 141 |
| AgsI | TTSAA | 3 cut(s) | 58, 196, 596 |
| AjnI | CCWGG | 1 cut(s) | 402 |
| AluBI | AGCT | 5 cut(s) | 172, 328, 419, 481, 494 |
| AluI | AGCT | 5 cut(s) | 172, 328, 419, 481, 494 |
| AlwI | GGATC | 2 cut(s) | 139, 152 |
| AoxI | GGCC | 1 cut(s) | 333 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| ApoI | RAATTY | 1 cut(s) | 586 |
| Asp718I | GGTACC | 1 cut(s) | 76 |
| AspLEI | GCGC | 1 cut(s) | 555 |
| AspS9I | GGNCC | 1 cut(s) | 334 |
| BamHI | GGATCC | 1 cut(s) | 144 |
| BanI | GGYRCC | 1 cut(s) | 76 |
| BauI | CACGAG | 1 cut(s) | 504 |
| BbsI | GAAGAC | 2 cut(s) | 420, 528 |
| BbvI | GCAGC | 1 cut(s) | 125 |
| BccI | CCATC | 2 cut(s) | 41, 87 |
| BciT130I | CCWGG | 1 cut(s) | 404 |
| BciVI | GTATCC | 1 cut(s) | 7 |
| BclI | TGATCA | 2 cut(s) | 214, 256 |
| BfaI | CTAG | 2 cut(s) | 176, 225 |
| BfuI | GTATCC | 1 cut(s) | 7 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlpI | GCTNAGC | 1 cut(s) | 324 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 1 cut(s) | 404 |
| BmgT120I | GGNCC | 1 cut(s) | 334 |
| BmiI | GGNNCC | 2 cut(s) | 78, 146 |
| BmrFI | CCNGG | 1 cut(s) | 404 |
| BmrI | ACTGGG | 1 cut(s) | 273 |
| BmsI | GCATC | 3 cut(s) | 376, 490, 549 |
| BmuI | ACTGGG | 1 cut(s) | 273 |
| BpiI | GAAGAC | 2 cut(s) | 420, 528 |
| BpmI | CTGGAG | 1 cut(s) | 425 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 324 |
| BpuEI | CTTGAG | 1 cut(s) | 383 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 588, 618 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 42, 141 |
| Bse1I | ACTGG | 1 cut(s) | 268 |
| BseBI | CCWGG | 1 cut(s) | 404 |
| BseGI | GGATG | 3 cut(s) | 52, 98, 505 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 42, 141 |
| BseMII | CTCAG | 5 cut(s) | 60, 143, 315, 324, 592 |
| BseNI | ACTGG | 1 cut(s) | 268 |
| BseRI | GAGGAG | 1 cut(s) | 258 |
| BseXI | GCAGC | 1 cut(s) | 125 |
| BsgI | GTGCAG | 1 cut(s) | 371 |
| Bsh1236I | CGCG | 1 cut(s) | 555 |
| BshFI | GGCC | 1 cut(s) | 335 |
| BshNI | GGYRCC | 1 cut(s) | 76 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 42, 141 |
| BsmI | GAATGC | 3 cut(s) | 37, 289, 573 |
| BsnI | GGCC | 1 cut(s) | 335 |
| Bsp143I | GATC | 4 cut(s) | 3, 144, 214, 256 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 324 |
| BspANI | GGCC | 1 cut(s) | 335 |
| BspCNI | CTCAG | 5 cut(s) | 61, 142, 316, 323, 591 |
| BspFNI | CGCG | 1 cut(s) | 555 |
| BspHI | TCATGA | 1 cut(s) | 297 |
| BspLI | GGNNCC | 2 cut(s) | 78, 146 |
| BspPI | GGATC | 2 cut(s) | 139, 152 |
| BspT107I | GGYRCC | 1 cut(s) | 76 |
| BsrI | ACTGG | 1 cut(s) | 268 |
| BssMI | GATC | 4 cut(s) | 3, 144, 214, 256 |
| BssSI | CACGAG | 1 cut(s) | 504 |
| Bst2BI | CACGAG | 1 cut(s) | 504 |
| Bst2UI | CCWGG | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 1 cut(s) | 63 |
| BstDEI | CTNAG | 7 cut(s) | 69, 129, 310, 324, 512, 563, 578 |
| BstF5I | GGATG | 3 cut(s) | 52, 98, 505 |
| BstFNI | CGCG | 1 cut(s) | 555 |
| BstHHI | GCGC | 1 cut(s) | 555 |
| BstKTI | GATC | 4 cut(s) | 6, 147, 217, 259 |
| BstMBI | GATC | 4 cut(s) | 3, 144, 214, 256 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 122, 311, 320, 500, 559, 568 |
| BstNI | CCWGG | 1 cut(s) | 404 |
| BstNSI | RCATGY | 1 cut(s) | 323 |
| BstSCI | CCNGG | 1 cut(s) | 402 |
| BstUI | CGCG | 1 cut(s) | 555 |
| BstV1I | GCAGC | 1 cut(s) | 125 |
| BstV2I | GAAGAC | 2 cut(s) | 420, 528 |
| BstX2I | RGATCY | 1 cut(s) | 144 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 88 |
| BstYI | RGATCY | 1 cut(s) | 144 |
| BsuI | GTATCC | 1 cut(s) | 7 |
| BsuRI | GGCC | 1 cut(s) | 335 |
| BtsCI | GGATG | 3 cut(s) | 52, 98, 505 |
| Cac8I | GCNNGC | 1 cut(s) | 63 |
| CciI | TCATGA | 1 cut(s) | 297 |
| CfoI | GCGC | 1 cut(s) | 555 |
| Cfr13I | GGNCC | 1 cut(s) | 334 |
| Csp6I | GTAC | 2 cut(s) | 77, 231 |
| CviAII | CATG | 6 cut(s) | 82, 119, 154, 298, 320, 488 |
| CviQI | GTAC | 2 cut(s) | 77, 231 |
| DdeI | CTNAG | 7 cut(s) | 69, 129, 310, 324, 512, 563, 578 |
| DpnI | GATC | 4 cut(s) | 5, 146, 216, 258 |
| DpnII | GATC | 4 cut(s) | 3, 144, 214, 256 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 421 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 421 |
| EcoRII | CCWGG | 1 cut(s) | 402 |
| FaeI | CATG | 6 cut(s) | 85, 122, 157, 301, 323, 491 |
| FatI | CATG | 6 cut(s) | 81, 118, 153, 297, 319, 487 |
| FbaI | TGATCA | 2 cut(s) | 214, 256 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 3 cut(s) | 59, 105, 512 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 2 cut(s) | 176, 225 |
| GlaI | GCGC | 1 cut(s) | 554 |
| GluI | GCNGC | 1 cut(s) | 114 |
| GsuI | CTGGAG | 1 cut(s) | 425 |
| HaeIII | GGCC | 1 cut(s) | 335 |
| HhaI | GCGC | 1 cut(s) | 555 |
| Hin1II | CATG | 6 cut(s) | 85, 122, 157, 301, 323, 491 |
| Hin6I | GCGC | 1 cut(s) | 553 |
| HinP1I | GCGC | 1 cut(s) | 553 |
| HindIII | AAGCTT | 2 cut(s) | 170, 492 |
| HinfI | GANTC | 2 cut(s) | 150, 574 |
| Hpy188I | TCNGA | 3 cut(s) | 70, 149, 448 |
| Hpy188III | TCNNGA | 2 cut(s) | 254, 298 |
| HpyAV | CCTTC | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 2 cut(s) | 352, 487 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 122, 311, 320, 500, 559, 568 |
| HpyF3I | CTNAG | 7 cut(s) | 69, 129, 310, 324, 512, 563, 578 |
| Hsp92II | CATG | 6 cut(s) | 85, 122, 157, 301, 323, 491 |
| HspAI | GCGC | 1 cut(s) | 553 |
| KpnI | GGTACC | 1 cut(s) | 80 |
| Ksp22I | TGATCA | 2 cut(s) | 214, 256 |
| Kzo9I | GATC | 4 cut(s) | 3, 144, 214, 256 |
| LpnPI | CCDG | 5 cut(s) | 219, 249, 350, 389, 416 |
| Lsp1109I | GCAGC | 1 cut(s) | 125 |
| LweI | GCATC | 3 cut(s) | 376, 490, 549 |
| MaeI | CTAG | 2 cut(s) | 176, 225 |
| MalI | GATC | 4 cut(s) | 5, 146, 216, 258 |
| MboI | GATC | 4 cut(s) | 3, 144, 214, 256 |
| MboII | GAAGA | 3 cut(s) | 420, 423, 533 |
| MflI | RGATCY | 1 cut(s) | 144 |
| MluCI | AATT | 3 cut(s) | 384, 586, 620 |
| MlyI | GAGTC | 1 cut(s) | 159 |
| MmeI | TCCRAC | 1 cut(s) | 563 |
| MnlI | CCTC | 8 cut(s) | 64, 76, 232, 236, 390, 531, 609, 614 |
| MseI | TTAA | 2 cut(s) | 168, 625 |
| MspR9I | CCNGG | 1 cut(s) | 404 |
| Mva1269I | GAATGC | 3 cut(s) | 37, 289, 573 |
| MvaI | CCWGG | 1 cut(s) | 404 |
| MvnI | CGCG | 1 cut(s) | 555 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 122, 311, 320, 500, 559, 568 |
| NdeII | GATC | 4 cut(s) | 3, 144, 214, 256 |
| NlaIII | CATG | 6 cut(s) | 85, 122, 157, 301, 323, 491 |
| NlaIV | GGNNCC | 2 cut(s) | 78, 146 |
| NspI | RCATGY | 1 cut(s) | 323 |
| PagI | TCATGA | 1 cut(s) | 297 |
| PctI | GAATGC | 3 cut(s) | 37, 289, 573 |
| PfeI | GAWTC | 1 cut(s) | 574 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 42 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PleI | GAGTC | 1 cut(s) | 158 |
| PpsI | GAGTC | 1 cut(s) | 158 |
| Psp6I | CCWGG | 1 cut(s) | 402 |
| PspGI | CCWGG | 1 cut(s) | 402 |
| PspN4I | GGNNCC | 2 cut(s) | 78, 146 |
| PspPI | GGNCC | 1 cut(s) | 334 |
| PsuI | RGATCY | 1 cut(s) | 144 |
| RsaI | GTAC | 2 cut(s) | 78, 232 |
| RsaNI | GTAC | 2 cut(s) | 77, 231 |
| SaqAI | TTAA | 2 cut(s) | 168, 625 |
| SatI | GCNGC | 1 cut(s) | 114 |
| Sau3AI | GATC | 4 cut(s) | 3, 144, 214, 256 |
| Sau96I | GGNCC | 1 cut(s) | 334 |
| SchI | GAGTC | 1 cut(s) | 159 |
| ScrFI | CCNGG | 1 cut(s) | 404 |
| SfaNI | GCATC | 3 cut(s) | 376, 490, 549 |
| SmlI | CTYRAG | 1 cut(s) | 362 |
| SmoI | CTYRAG | 1 cut(s) | 362 |
| Sse9I | AATT | 3 cut(s) | 384, 586, 620 |
| SspMI | CTAG | 2 cut(s) | 176, 225 |
| StyD4I | CCNGG | 1 cut(s) | 402 |
| TaqII | GACCGA | 1 cut(s) | 283 |
| TasI | AATT | 3 cut(s) | 384, 586, 620 |
| TfiI | GAWTC | 1 cut(s) | 574 |
| Tru1I | TTAA | 2 cut(s) | 168, 625 |
| Tru9I | TTAA | 2 cut(s) | 168, 625 |
| TseI | GCWGC | 1 cut(s) | 113 |
| TspDTI | ATGAA | 1 cut(s) | 504 |
| TspGWI | ACGGA | 2 cut(s) | 124, 596 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 42 |
| XapI | RAATTY | 1 cut(s) | 586 |
| XceI | RCATGY | 1 cut(s) | 323 |
| XspI | CTAG | 2 cut(s) | 176, 225 |