Rh2AG532900

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000039
Physical Location & Seq
Forward (+)
76216943 .. 76221262
4320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG532900.1

Sequence Viewer

Length: 1158 bp
ATGGATATTAATCCGGTGGAGTTTTTCGGAGGTGCTGTTCTAGGAACAGCATTCAGTGCAGTCTATGCTGGCGTTGAAGATCTGATTGTCAAGAGCCACTTGTTCAGAAATCTCTTCAAAAACATCAAATCCAGGCTAGACACTCTGAAGTCACTCATGGCCGAGATGGCTCGGTCTAACCAGCAACTGTCTTGCACACAGAACGATGAGCTTAGAAGTTTAGAAGAAGTTCTAAAGGTCGGCGAAGAGCTTGTTCGAAAGTGCTCAAATGTTAGGCGGTGGGATCTCTACAGGAAGTACAAATATGCCACAAAACTTCTTGCATGGGAAGAAGATCTTGGAAAACAATTGCAGCTGCTGCCGGTGTACGGAATCAGGGATGGGAAGAGGACCGCGGTGGTAGTAGAGAATATAGAGGTTTCTGTAGGGAGTGTGCAGGTGGGTGTCAACCAAATTTCTAGTACTCTCGAGGAGGTGAACCAACTCATGAAAGAGAATTTTGTGATACAAGACCAATCTGCTGAAAGTCAAGCTTGGTGTGCAGTCCCTGAACTTCCAGAGGTTACAGTTGGATTGAAAGCTCCTCTGAAGGATTTGAAGACACAGCTTCTTGGGAATGATGGATTTTCAATGCTTGTGCTCACCGCTCCCGGAGGATGTGGGAAAACTACCTTGGCAACAAAATTTTGCAAAGATCAGGAAGTCAAAGATAAATTCGGCAAAAATATCTTCTTTGTTACTGTTTCTAAGAAGTATAGCTTAGATTCTGTTGTAGAACAACTATATCGACACAAGGGTTCTCAAGTTCCTGCTTTCCAAAATGAAGTGCATGCAGTTCAGTGGCTGCAAACATTTTTGAAGGAAGAAGGAGAGAAACCTTCACTGTTGGTCTTGGATGATGTTTGGTCTGGATCAGAATCTCTTCTTGACAAATTTGAATGCAGAATGGCAAATATTAAGATTCTTGTGACATCAAGATCTGAATTTCCCGCGTTCAGTCCTCTATATCGTTTAAAAATGTTGAATAATGACGATGCAATGGAACTGTTTCGTCATTCAGCATCATTGAATGATAAGAGCTCTCATATTCCAGCACCCCTTTCAAAAAAGGTGAGGCGATTTTTTAGTTGCATTTACCATACTTGTCTTATTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

385

Amino Acids

43.46

Weight (kDa)

8.01

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 7 - 133 7.7e-19 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 195 - 354 4.7e-18 NB-ARC domain
AAA_22 PF13401 210 - 301 6.6e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 427
Acc36I ACCTGC 1 cut(s) 427
AccBSI CCGCTC 1 cut(s) 647
AccII CGCG 2 cut(s) 395, 992
AciI CCGC 5 cut(s) 277, 393, 395, 645, 990
AclWI GGATC 2 cut(s) 291, 919
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 6 cut(s) 453, 496, 683, 713, 932, 983
AcuI CTGAAG 2 cut(s) 167, 608
AfaI GTAC 3 cut(s) 299, 368, 463
AfiI CCNNNNNNNGG 1 cut(s) 368
AjnI CCWGG 1 cut(s) 131
AjuI GAANNNNNNNTTGG 4 cut(s) 321, 353, 656, 688
AloI GAACNNNNNNTCC 2 cut(s) 21, 53
AluBI AGCT 8 cut(s) 211, 250, 355, 533, 581, 607, 759, 1080
AluI AGCT 8 cut(s) 211, 250, 355, 533, 581, 607, 759, 1080
Alw21I GWGCWC 3 cut(s) 266, 642, 1082
AlwI GGATC 2 cut(s) 291, 919
AlwNI CAGNNNCTG 4 cut(s) 187, 358, 548, 844
Ama87I CYCGRG 1 cut(s) 467
AoxI GGCC 1 cut(s) 159
ApeKI GCWGC 4 cut(s) 352, 355, 358, 844
ApoI RAATTY 6 cut(s) 453, 496, 683, 713, 932, 983
AseI ATTAAT 2 cut(s) 9, 1152
Asp700I GAANNNNTTC 3 cut(s) 228, 921, 1047
AspS9I GGNCC 1 cut(s) 390
AsuC2I CCSGG 1 cut(s) 651
AsuHPI GGTGA 3 cut(s) 487, 634, 1123
AsuII TTCGAA 1 cut(s) 256
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 1 cut(s) 390
BanII GRGCYC 1 cut(s) 1082
BbsI GAAGAC 1 cut(s) 605
Bbv12I GWGCWC 3 cut(s) 266, 642, 1082
BbvI GCAGC 4 cut(s) 342, 345, 364, 831
BccI CCATC 3 cut(s) 160, 374, 614
BciT130I CCWGG 1 cut(s) 133
BcnI CCSGG 1 cut(s) 651
BfaI CTAG 3 cut(s) 41, 137, 459
BfmI CTRYAG 2 cut(s) 289, 423
BfuAI ACCTGC 1 cut(s) 427
BglI GCCNNNNNGGC 1 cut(s) 167
BglII AGATCT 3 cut(s) 79, 334, 977
BisI GCNGC 4 cut(s) 353, 356, 359, 845
BlsI GCNGC 4 cut(s) 354, 357, 360, 846
BmcAI AGTACT 1 cut(s) 463
Bme1390I CCNGG 2 cut(s) 133, 651
Bme18I GGWCC 1 cut(s) 390
BmeT110I CYCGRG 1 cut(s) 467
BmgT120I GGNCC 1 cut(s) 390
BmrFI CCNGG 2 cut(s) 133, 651
BmsI GCATC 2 cut(s) 1024, 1070
BpiI GAAGAC 1 cut(s) 605
Bpu14I TTCGAA 1 cut(s) 256
BpuEI CTTGAG 1 cut(s) 786
BpuMI CCSGG 1 cut(s) 651
BsaBI GATNNNNATC 2 cut(s) 9, 916
BsaJI CCNNGG 2 cut(s) 393, 672
BsaWI WCCGGW 1 cut(s) 13
BsaXI ACNNNNNCTCC 2 cut(s) 21, 51
Bsc4I CCNNNNNNNGG 1 cut(s) 368
Bse118I RCCGGY 1 cut(s) 361
Bse3DI GCAATG 1 cut(s) 1044
Bse8I GATNNNNATC 2 cut(s) 9, 916
BseBI CCWGG 1 cut(s) 133
BseDI CCNNGG 2 cut(s) 393, 672
BseGI GGATG 3 cut(s) 385, 662, 901
BseJI GATNNNNATC 2 cut(s) 9, 916
BseLI CCNNNNNNNGG 1 cut(s) 368
BseMI GCAATG 1 cut(s) 1044
BseRI GAGGAG 2 cut(s) 485, 573
BseXI GCAGC 4 cut(s) 342, 345, 364, 831
BsgI GTGCAG 3 cut(s) 78, 455, 561
Bsh1236I CGCG 2 cut(s) 395, 992
BshFI GGCC 1 cut(s) 161
BsiHKAI GWGCWC 3 cut(s) 266, 642, 1082
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 3 cut(s) 14, 362, 651
BslFI GGGAC 1 cut(s) 530
BslI CCNNNNNNNGG 1 cut(s) 368
BsmFI GGGAC 1 cut(s) 530
BsmI GAATGC 2 cut(s) 50, 944
BsnI GGCC 1 cut(s) 161
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 1 cut(s) 256
Bsp1286I GDGCHC 3 cut(s) 266, 642, 1082
Bsp143I GATC 6 cut(s) 79, 283, 334, 694, 911, 977
BspACI CCGC 5 cut(s) 277, 393, 395, 645, 990
BspANI GGCC 1 cut(s) 161
BspFNI CGCG 2 cut(s) 395, 992
BspHI TCATGA 1 cut(s) 486
BspMI ACCTGC 1 cut(s) 427
BspPI GGATC 2 cut(s) 291, 919
BspQI GCTCTTC 1 cut(s) 240
BspT104I TTCGAA 1 cut(s) 256
BsrBI CCGCTC 1 cut(s) 647
BsrDI GCAATG 1 cut(s) 1044
BsrFI RCCGGY 1 cut(s) 361
BssAI RCCGGY 1 cut(s) 361
BssECI CCNNGG 2 cut(s) 393, 672
BssMI GATC 6 cut(s) 79, 283, 334, 694, 911, 977
BssT1I CCWWGG 1 cut(s) 672
Bst2UI CCWGG 1 cut(s) 133
Bst4CI ACNGT 5 cut(s) 189, 568, 742, 885, 1047
Bst6I CTCTTC 4 cut(s) 119, 240, 380, 927
BstAPI GCANNNNNTGC 3 cut(s) 56, 65, 358
BstBI TTCGAA 1 cut(s) 256
BstC8I GCNNGC 2 cut(s) 70, 831
BstDEI CTNAG 3 cut(s) 212, 747, 760
BstDSI CCRYGG 1 cut(s) 393
BstF5I GGATG 3 cut(s) 385, 662, 901
BstFNI CGCG 2 cut(s) 395, 992
BstKTI GATC 6 cut(s) 82, 286, 337, 697, 914, 980
BstMBI GATC 6 cut(s) 79, 283, 334, 694, 911, 977
BstMWI GCNNNNNNNGC 5 cut(s) 56, 65, 167, 358, 539
BstNI CCWGG 1 cut(s) 133
BstNSI RCATGY 1 cut(s) 833
BstSCI CCNGG 2 cut(s) 131, 649
BstSFI CTRYAG 2 cut(s) 289, 423
BstUI CGCG 2 cut(s) 395, 992
BstV1I GCAGC 4 cut(s) 342, 345, 364, 831
BstV2I GAAGAC 1 cut(s) 605
BstX2I RGATCY 4 cut(s) 79, 283, 334, 977
BstYI RGATCY 4 cut(s) 79, 283, 334, 977
BsuRI GGCC 1 cut(s) 161
BtgI CCRYGG 1 cut(s) 393
BtsCI GGATG 3 cut(s) 385, 662, 901
BtsIMutI CAGTG 3 cut(s) 61, 845, 881
BveI ACCTGC 1 cut(s) 427
Cac8I GCNNGC 2 cut(s) 70, 831
CaiI CAGNNNCTG 4 cut(s) 187, 358, 548, 844
CciI TCATGA 1 cut(s) 486
Cfr10I RCCGGY 1 cut(s) 361
Cfr13I GGNCC 1 cut(s) 390
Cfr42I CCGCGG 1 cut(s) 396
Csp6I GTAC 3 cut(s) 298, 367, 462
CviAII CATG 4 cut(s) 157, 324, 487, 830
CviQI GTAC 3 cut(s) 298, 367, 462
DdeI CTNAG 3 cut(s) 212, 747, 760
DpnI GATC 6 cut(s) 81, 285, 336, 696, 913, 979
DpnII GATC 6 cut(s) 79, 283, 334, 694, 911, 977
DraI TTTAAA 1 cut(s) 1014
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 4 cut(s) 119, 240, 380, 927
EarI CTCTTC 4 cut(s) 119, 240, 380, 927
Ecl136II GAGCTC 1 cut(s) 1080
Eco130I CCWWGG 1 cut(s) 672
Eco24I GRGCYC 1 cut(s) 1082
Eco47I GGWCC 1 cut(s) 390
Eco53kI GAGCTC 1 cut(s) 1080
Eco57I CTGAAG 2 cut(s) 167, 608
Eco88I CYCGRG 1 cut(s) 467
EcoICRI GAGCTC 1 cut(s) 1080
EcoRII CCWGG 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 672
EcoT38I GRGCYC 1 cut(s) 1082
ErhI CCWWGG 1 cut(s) 672
FaeI CATG 4 cut(s) 160, 327, 490, 833
FalI AAGNNNNNCTT 8 cut(s) 83, 115, 321, 353, 517, 549, 743, 775
FaqI GGGAC 1 cut(s) 530
FatI CATG 4 cut(s) 156, 323, 486, 829
FauI CCCGC 1 cut(s) 997
Fnu4HI GCNGC 4 cut(s) 353, 356, 359, 845
FokI GGATG 3 cut(s) 392, 669, 908
FriOI GRGCYC 1 cut(s) 1082
Fsp4HI GCNGC 4 cut(s) 353, 356, 359, 845
FspBI CTAG 3 cut(s) 41, 137, 459
GluI GCNGC 4 cut(s) 353, 356, 359, 845
HaeIII GGCC 1 cut(s) 161
HapII CCGG 3 cut(s) 14, 362, 651
Hin1II CATG 4 cut(s) 160, 327, 490, 833
HincII GTYRAC 1 cut(s) 448
HindII GTYRAC 1 cut(s) 448
HindIII AAGCTT 1 cut(s) 531
HinfI GANTC 4 cut(s) 372, 764, 917, 961
HpaII CCGG 3 cut(s) 14, 362, 651
HphI GGTGA 3 cut(s) 487, 634, 1123
Hpy166II GTNNAC 3 cut(s) 367, 448, 478
Hpy188I TCNGA 7 cut(s) 29, 84, 107, 147, 588, 916, 982
Hpy188III TCNNGA 8 cut(s) 91, 467, 487, 557, 698, 909, 926, 975
Hpy8I GTNNAC 3 cut(s) 367, 448, 478
HpyAV CCTTC 4 cut(s) 583, 853, 860, 888
HpyCH4III ACNGT 5 cut(s) 189, 568, 742, 885, 1047
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 65, 167, 358, 539
HpyF3I CTNAG 3 cut(s) 212, 747, 760
Hsp92II CATG 4 cut(s) 160, 327, 490, 833
KspI CCGCGG 1 cut(s) 396
Kzo9I GATC 6 cut(s) 79, 283, 334, 694, 911, 977
LguI GCTCTTC 1 cut(s) 240
LmnI GCTCC 2 cut(s) 586, 652
Lsp1109I GCAGC 4 cut(s) 342, 345, 364, 831
LweI GCATC 2 cut(s) 1024, 1070
MaeI CTAG 3 cut(s) 41, 137, 459
MaeIII GTNAC 4 cut(s) 150, 562, 736, 967
MalI GATC 6 cut(s) 81, 285, 336, 696, 913, 979
MbiI CCGCTC 1 cut(s) 647
MboI GATC 6 cut(s) 79, 283, 334, 694, 911, 977
MfeI CAATTG 1 cut(s) 347
MflI RGATCY 4 cut(s) 79, 283, 334, 977
MhlI GDGCHC 3 cut(s) 266, 642, 1082
MluCI AATT 8 cut(s) 347, 453, 496, 683, 713, 932, 983, 1153
MmeI TCCRAC 1 cut(s) 550
MroXI GAANNNNTTC 3 cut(s) 228, 921, 1047
MseI TTAA 5 cut(s) 9, 957, 1013, 1152, 1156
MspA1I CMGCKG 2 cut(s) 355, 395
MspI CCGG 3 cut(s) 14, 362, 651
MspR9I CCNGG 2 cut(s) 133, 651
MunI CAATTG 1 cut(s) 347
Mva1269I GAATGC 2 cut(s) 50, 944
MvaI CCWGG 1 cut(s) 133
MvnI CGCG 2 cut(s) 395, 992
MwoI GCNNNNNNNGC 5 cut(s) 56, 65, 167, 358, 539
NciI CCSGG 1 cut(s) 651
NdeII GATC 6 cut(s) 79, 283, 334, 694, 911, 977
NlaIII CATG 4 cut(s) 160, 327, 490, 833
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 2 cut(s) 150, 967
NspI RCATGY 1 cut(s) 833
NspV TTCGAA 1 cut(s) 256
PacI TTAATTAA 1 cut(s) 1156
PaeI GCATGC 1 cut(s) 833
PaeR7I CTCGAG 1 cut(s) 467
PagI TCATGA 1 cut(s) 486
PaqCI CACCTGC 1 cut(s) 427
PciSI GCTCTTC 1 cut(s) 240
PctI GAATGC 2 cut(s) 50, 944
PdmI GAANNNNTTC 3 cut(s) 228, 921, 1047
PfeI GAWTC 4 cut(s) 372, 764, 917, 961
PfoI TCCNGGA 1 cut(s) 649
PkrI GCNGC 4 cut(s) 354, 357, 360, 846
PshBI ATTAAT 2 cut(s) 9, 1152
Psp124BI GAGCTC 1 cut(s) 1082
Psp6I CCWGG 1 cut(s) 131
PspGI CCWGG 1 cut(s) 131
PspPI GGNCC 1 cut(s) 390
PstNI CAGNNNCTG 4 cut(s) 187, 358, 548, 844
PsuI RGATCY 4 cut(s) 79, 283, 334, 977
PvuII CAGCTG 1 cut(s) 355
RsaI GTAC 3 cut(s) 299, 368, 463
RsaNI GTAC 3 cut(s) 298, 367, 462
SacI GAGCTC 1 cut(s) 1082
SacII CCGCGG 1 cut(s) 396
SapI GCTCTTC 1 cut(s) 240
SaqAI TTAA 5 cut(s) 9, 957, 1013, 1152, 1156
SatI GCNGC 4 cut(s) 353, 356, 359, 845
Sau3AI GATC 6 cut(s) 79, 283, 334, 694, 911, 977
Sau96I GGNCC 1 cut(s) 390
ScaI AGTACT 1 cut(s) 463
ScrFI CCNGG 2 cut(s) 133, 651
SduI GDGCHC 3 cut(s) 266, 642, 1082
SfaNI GCATC 2 cut(s) 1024, 1070
SfcI CTRYAG 2 cut(s) 289, 423
Sfr274I CTCGAG 1 cut(s) 467
Sfr303I CCGCGG 1 cut(s) 396
SfuI TTCGAA 1 cut(s) 256
SgrBI CCGCGG 1 cut(s) 396
SinI GGWCC 1 cut(s) 390
SlaI CTCGAG 1 cut(s) 467
SmlI CTYRAG 2 cut(s) 467, 801
SmoI CTYRAG 2 cut(s) 467, 801
SphI GCATGC 1 cut(s) 833
Sse9I AATT 8 cut(s) 347, 453, 496, 683, 713, 932, 983, 1153
SsiI CCGC 5 cut(s) 277, 393, 395, 645, 990
SspI AATATT 1 cut(s) 955
SspMI CTAG 3 cut(s) 41, 137, 459
SstI GAGCTC 1 cut(s) 1082
StyD4I CCNGG 2 cut(s) 131, 649
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 5 cut(s) 189, 568, 742, 885, 1047
TaqI TCGA 3 cut(s) 256, 468, 787
TaqII GACCGA 1 cut(s) 162
TasI AATT 8 cut(s) 347, 453, 496, 683, 713, 932, 983, 1153
TatI WGTACW 2 cut(s) 297, 461
TfiI GAWTC 4 cut(s) 372, 764, 917, 961
Tru1I TTAA 5 cut(s) 9, 957, 1013, 1152, 1156
Tru9I TTAA 5 cut(s) 9, 957, 1013, 1152, 1156
TscAI CASTG 3 cut(s) 61, 845, 888
TseFI GTSAC 2 cut(s) 150, 967
TseI GCWGC 4 cut(s) 352, 355, 358, 844
Tsp45I GTSAC 2 cut(s) 150, 967
TspDTI ATGAA 2 cut(s) 503, 837
TspGWI ACGGA 1 cut(s) 384
TspRI CASTG 3 cut(s) 61, 845, 888
VpaK11BI GGWCC 1 cut(s) 390
VspI ATTAAT 2 cut(s) 9, 1152
XapI RAATTY 6 cut(s) 453, 496, 683, 713, 932, 983
XceI RCATGY 1 cut(s) 833
XhoI CTCGAG 1 cut(s) 467
XmnI GAANNNNTTC 3 cut(s) 228, 921, 1047
XspI CTAG 3 cut(s) 41, 137, 459
ZrmI AGTACT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.